RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ARHGAP39Q9C0H5 1083 aa16.42■□□□□ 0.22
UBR4-213ENST00000483922 SPINK5Q9NQ38 1064 aaPredicted RBP16.42■□□□□ 0.22
UBR4-213ENST00000483922 SERPINA10Q9UK55 444 aa16.42■□□□□ 0.22
UBR4-213ENST00000483922 TTF2Q9UNY4 1162 aaKnown RBP16.42■□□□□ 0.22
UBR4-213ENST00000483922 COLQQ9Y215 455 aaPredicted RBP16.42■□□□□ 0.22
UBR4-213ENST00000483922 CHMP3Q9Y3E7 222 aa16.42■□□□□ 0.22
UBR4-213ENST00000483922 RANBP2P49792 3224 aaKnown RBP16.42■□□□□ 0.22
UBR4-213ENST00000483922 IL16Q14005 1332 aa16.42■□□□□ 0.22
UBR4-213ENST00000483922 EXOSC9Q06265 439 aaKnown RBP16.41■□□□□ 0.22
UBR4-213ENST00000483922 MFSD14BQ5SR56 506 aa16.41■□□□□ 0.22
UBR4-213ENST00000483922 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBR4-213ENST00000483922 ZSWIM8A7E2V4 1837 aa16.4■□□□□ 0.22
UBR4-213ENST00000483922 CCL15-CCL14A0A0B4J2E2 113 aa16.4■□□□□ 0.22
UBR4-213ENST00000483922 CRKP46108 304 aa16.4■□□□□ 0.22
UBR4-213ENST00000483922 MAP3K9P80192 1104 aa16.4■□□□□ 0.22
UBR4-213ENST00000483922 CCL15Q16663 113 aa16.4■□□□□ 0.22
UBR4-213ENST00000483922 MYCP01106 439 aaPredicted RBP16.39■□□□□ 0.21
UBR4-213ENST00000483922 CTGFP29279 349 aa16.39■□□□□ 0.21
UBR4-213ENST00000483922 HIBADHP31937 336 aaKnown RBP16.39■□□□□ 0.21
UBR4-213ENST00000483922 CACNB3P54284 484 aa16.39■□□□□ 0.21
UBR4-213ENST00000483922 CNNM1Q9NRU3 951 aa16.39■□□□□ 0.21
UBR4-213ENST00000483922 RIPOR2Q9Y4F9 1068 aa16.39■□□□□ 0.21
UBR4-213ENST00000483922 SNCAIPQ9Y6H5 919 aa16.39■□□□□ 0.21
UBR4-213ENST00000483922 GRM8O00222 908 aa16.38■□□□□ 0.21
UBR4-213ENST00000483922 UBE4AQ14139 1066 aa16.38■□□□□ 0.21
UBR4-213ENST00000483922 TAF1CQ15572 869 aaPredicted RBP16.38■□□□□ 0.21
UBR4-213ENST00000483922 CCDC57Q2TAC2 916 aa16.38■□□□□ 0.21
UBR4-213ENST00000483922 FBXO33Q7Z6M2 555 aa16.38■□□□□ 0.21
UBR4-213ENST00000483922 SH3TC2Q8TF17 1288 aa16.38■□□□□ 0.21
UBR4-213ENST00000483922 OTUD5Q96G74 571 aa16.38■□□□□ 0.21
UBR4-213ENST00000483922 ZFYVE28Q9HCC9 887 aa16.38■□□□□ 0.21
UBR4-213ENST00000483922 IQSEC3Q9UPP2 1182 aaPredicted RBP16.38■□□□□ 0.21
UBR4-213ENST00000483922 GTF2A2P52657 109 aa16.37■□□□□ 0.21
UBR4-213ENST00000483922 ZKSCAN4Q969J2 545 aaPredicted RBP16.37■□□□□ 0.21
UBR4-213ENST00000483922 SUCLG2Q96I99 432 aa16.37■□□□□ 0.21
UBR4-213ENST00000483922 TMEM106CQ9BVX2 250 aa16.37■□□□□ 0.21
UBR4-213ENST00000483922 SALL2Q9Y467 1007 aaPredicted RBP16.37■□□□□ 0.21
UBR4-213ENST00000483922 SPDYE5A6NIY4 337 aa16.36■□□□□ 0.21
UBR4-213ENST00000483922 BTBD19C9JJ37 291 aa16.36■□□□□ 0.21
UBR4-213ENST00000483922 H0YGN5 161 aa16.36■□□□□ 0.21
UBR4-213ENST00000483922 NBPF7P0C2Y1 421 aaPredicted RBP16.36■□□□□ 0.21
UBR4-213ENST00000483922 TNFAIP1Q13829 316 aa16.36■□□□□ 0.21
UBR4-213ENST00000483922 SLC9C1Q4G0N8 1177 aa16.36■□□□□ 0.21
UBR4-213ENST00000483922 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
UBR4-213ENST00000483922 IRF6O14896 467 aa16.35■□□□□ 0.21
UBR4-213ENST00000483922 TLR2O60603 784 aa16.35■□□□□ 0.21
UBR4-213ENST00000483922 LRRC24Q50LG9 513 aa16.35■□□□□ 0.21
UBR4-213ENST00000483922 ARAP2Q8WZ64 1704 aa16.35■□□□□ 0.21
UBR4-213ENST00000483922 ECM2O94769 699 aaPredicted RBP16.34■□□□□ 0.21
UBR4-213ENST00000483922 LACTBP83111 547 aaPredicted RBP16.34■□□□□ 0.21
UBR4-213ENST00000483922 MTFR1Q15390 333 aa16.34■□□□□ 0.21
UBR4-213ENST00000483922 TAF7LQ5H9L4 462 aa16.34■□□□□ 0.21
UBR4-213ENST00000483922 APOBEC3HQ6NTF7 200 aaKnown RBP16.34■□□□□ 0.21
UBR4-213ENST00000483922 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
UBR4-213ENST00000483922 SHISA4Q96DD7 197 aa16.34■□□□□ 0.21
UBR4-213ENST00000483922 CEP290O15078 2479 aa16.34■□□□□ 0.21
UBR4-213ENST00000483922 CACNA1FO60840 1977 aa16.33■□□□□ 0.21
UBR4-213ENST00000483922 SLC4A8Q2Y0W8 1093 aa16.33■□□□□ 0.2
UBR4-213ENST00000483922 C17orf99Q6UX52 265 aa16.33■□□□□ 0.2
UBR4-213ENST00000483922 WDR63Q8IWG1 891 aa16.33■□□□□ 0.2
UBR4-213ENST00000483922 VGLL2Q8N8G2 317 aa16.33■□□□□ 0.2
UBR4-213ENST00000483922 BCAMP50895 628 aa16.32■□□□□ 0.2
UBR4-213ENST00000483922 HDLBPQ00341 1268 aaKnown RBP16.32■□□□□ 0.2
UBR4-213ENST00000483922 CHAF1AQ13111 956 aaPredicted RBP16.32■□□□□ 0.2
UBR4-213ENST00000483922 MOGSQ13724 837 aa16.32■□□□□ 0.2
UBR4-213ENST00000483922 ERO1BQ86YB8 467 aa16.32■□□□□ 0.2
UBR4-213ENST00000483922 ANKRD44Q8N8A2 993 aa16.32■□□□□ 0.2
UBR4-213ENST00000483922 C9orf78Q9NZ63 289 aaPredicted RBP16.32■□□□□ 0.2
UBR4-213ENST00000483922 CSADQ9Y600 493 aa16.32■□□□□ 0.2
UBR4-213ENST00000483922 UTYO14607 1347 aa16.31■□□□□ 0.2
UBR4-213ENST00000483922 ALDH1L1O75891 902 aa16.31■□□□□ 0.2
UBR4-213ENST00000483922 CETPP11597 493 aa16.31■□□□□ 0.2
UBR4-213ENST00000483922 TNNI2P48788 182 aa16.31■□□□□ 0.2
UBR4-213ENST00000483922 RABL6Q3YEC7 729 aaPredicted RBP16.31■□□□□ 0.2
UBR4-213ENST00000483922 MIGA2Q7L4E1 593 aa16.31■□□□□ 0.2
UBR4-213ENST00000483922 KLHDC4Q8TBB5 520 aa16.31■□□□□ 0.2
UBR4-213ENST00000483922 TRIM47Q96LD4 638 aa16.31■□□□□ 0.2
UBR4-213ENST00000483922 ZDHHC15Q96MV8 337 aa16.31■□□□□ 0.2
UBR4-213ENST00000483922 WRNIP1Q96S55 665 aa16.31■□□□□ 0.2
UBR4-213ENST00000483922 MRIQ9BWK5 157 aa16.31■□□□□ 0.2
UBR4-213ENST00000483922 CPA4Q9UI42 421 aa16.31■□□□□ 0.2
UBR4-213ENST00000483922 MROH5Q6ZUA9 1318 aa16.3■□□□□ 0.2
UBR4-213ENST00000483922 ADGRA2Q96PE1 1338 aa16.3■□□□□ 0.2
UBR4-213ENST00000483922 INPP5BP32019 993 aa16.3■□□□□ 0.2
UBR4-213ENST00000483922 PPIL2Q13356 520 aa16.3■□□□□ 0.2
UBR4-213ENST00000483922 SLC4A10Q6U841 1118 aa16.3■□□□□ 0.2
UBR4-213ENST00000483922 UBE2Q1Q7Z7E8 422 aa16.3■□□□□ 0.2
UBR4-213ENST00000483922 FAM83AQ86UY5 434 aa16.3■□□□□ 0.2
UBR4-213ENST00000483922 BICC1Q9H694 974 aaKnown RBP16.3■□□□□ 0.2
UBR4-213ENST00000483922 TRIOBPQ9H2D6 2365 aa16.3■□□□□ 0.2
UBR4-213ENST00000483922 PDE8BO95263 885 aa16.29■□□□□ 0.2
UBR4-213ENST00000483922 SNAPC2Q13487 334 aa16.29■□□□□ 0.2
UBR4-213ENST00000483922 ARHGEF6Q15052 776 aa16.29■□□□□ 0.2
UBR4-213ENST00000483922 TEKT1Q969V4 418 aa16.29■□□□□ 0.2
UBR4-213ENST00000483922 SRCIN1Q9C0H9 1055 aa16.29■□□□□ 0.2
UBR4-213ENST00000483922 ZCCHC17Q9NP64 241 aaKnown RBP16.29■□□□□ 0.2
UBR4-213ENST00000483922 ZNF112Q9UJU3 913 aa16.29■□□□□ 0.2
UBR4-213ENST00000483922 FGFR2P21802 821 aa16.28■□□□□ 0.2
UBR4-213ENST00000483922 CHRDL2Q6WN34 429 aa16.28■□□□□ 0.2
UBR4-213ENST00000483922 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms