RNA–Protein interactions for RNA: ENST00000483817.3

CBWD1-214, Transcript of COBW domain containing 1, humanhuman

TSL 3

Gene CBWD1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-214ENST00000483817 GIMAP7Q8NHV1 300 aa7.66□□□□□ -1.18
CBWD1-214ENST00000483817 KLHDC7BQ96G42 594 aa7.66□□□□□ -1.18
CBWD1-214ENST00000483817 ATG3Q9NT62 314 aa7.66□□□□□ -1.18
CBWD1-214ENST00000483817 CARMIL2Q6F5E8 1435 aa7.66□□□□□ -1.18
CBWD1-214ENST00000483817 RSF1Q96T23 1441 aaPredicted RBP7.66□□□□□ -1.18
CBWD1-214ENST00000483817 TOP2AP11388 1531 aaKnown RBP7.66□□□□□ -1.18
CBWD1-214ENST00000483817 CARNS1A5YM72 827 aa7.65□□□□□ -1.18
CBWD1-214ENST00000483817 PIP4K2BP78356 416 aa7.65□□□□□ -1.18
CBWD1-214ENST00000483817 CPSF6Q16630 551 aaKnown RBP eCLIP7.65□□□□□ -1.18
CBWD1-214ENST00000483817 B8ZZF3 427 aa7.64□□□□□ -1.19
CBWD1-214ENST00000483817 NLRP12P59046 1061 aa7.64□□□□□ -1.19
CBWD1-214ENST00000483817 SLC7A3Q8WY07 619 aa7.64□□□□□ -1.19
CBWD1-214ENST00000483817 WNT8BQ93098 351 aa7.64□□□□□ -1.19
CBWD1-214ENST00000483817 PMEPA1Q969W9 287 aa7.64□□□□□ -1.19
CBWD1-214ENST00000483817 HIF3AQ9Y2N7 669 aa7.64□□□□□ -1.19
CBWD1-214ENST00000483817 EREGO14944 169 aa7.63□□□□□ -1.19
CBWD1-214ENST00000483817 PHACTR2O75167 634 aa7.63□□□□□ -1.19
CBWD1-214ENST00000483817 TNFRSF21O75509 655 aa7.63□□□□□ -1.19
CBWD1-214ENST00000483817 F13BP05160 661 aa7.63□□□□□ -1.19
CBWD1-214ENST00000483817 NPR3P17342 541 aa7.63□□□□□ -1.19
CBWD1-214ENST00000483817 PHLDB3Q6NSJ2 640 aa7.63□□□□□ -1.19
CBWD1-214ENST00000483817 SNX29Q8TEQ0 813 aa7.63□□□□□ -1.19
CBWD1-214ENST00000483817 OSMRQ99650 979 aa7.63□□□□□ -1.19
CBWD1-214ENST00000483817 ZKSCAN3Q9BRR0 538 aa7.63□□□□□ -1.19
CBWD1-214ENST00000483817 PAK6Q9NQU5 681 aaPredicted RBP7.63□□□□□ -1.19
CBWD1-214ENST00000483817 BSDC1Q9NW68 430 aaPredicted RBP7.63□□□□□ -1.19
CBWD1-214ENST00000483817 FOXD3Q9UJU5 478 aaPredicted RBP7.63□□□□□ -1.19
CBWD1-214ENST00000483817 SOX13Q9UN79 622 aa7.63□□□□□ -1.19
CBWD1-214ENST00000483817 MTMR7Q9Y216 660 aa7.63□□□□□ -1.19
CBWD1-214ENST00000483817 URB2Q14146 1524 aaKnown RBP7.62□□□□□ -1.19
CBWD1-214ENST00000483817 FAM13AO94988 1023 aa7.62□□□□□ -1.19
CBWD1-214ENST00000483817 ABL1P00519 1130 aa7.62□□□□□ -1.19
CBWD1-214ENST00000483817 BUD31P41223 144 aaPredicted RBP7.62□□□□□ -1.19
CBWD1-214ENST00000483817 ZNF211Q13398 564 aaPredicted RBP7.62□□□□□ -1.19
CBWD1-214ENST00000483817 TMEM102Q8N9M5 508 aaPredicted RBP7.62□□□□□ -1.19
CBWD1-214ENST00000483817 OSGEPQ9NPF4 335 aa7.62□□□□□ -1.19
CBWD1-214ENST00000483817 ANO2Q9NQ90 1003 aa7.62□□□□□ -1.19
CBWD1-214ENST00000483817 SART1O43290 800 aaKnown RBP7.61□□□□□ -1.19
CBWD1-214ENST00000483817 FZD6O60353 706 aa7.61□□□□□ -1.19
CBWD1-214ENST00000483817 USP5P45974 858 aa7.61□□□□□ -1.19
CBWD1-214ENST00000483817 PREPP48147 710 aa7.61□□□□□ -1.19
CBWD1-214ENST00000483817 EHHADHQ08426 723 aa7.61□□□□□ -1.19
CBWD1-214ENST00000483817 SF3B2Q13435 895 aaKnown RBP7.61□□□□□ -1.19
CBWD1-214ENST00000483817 HGSNATQ68CP4 663 aa7.61□□□□□ -1.19
CBWD1-214ENST00000483817 KSR1Q8IVT5 923 aa7.61□□□□□ -1.19
CBWD1-214ENST00000483817 OSBPL1AQ9BXW6 950 aa7.61□□□□□ -1.19
CBWD1-214ENST00000483817 IFT140Q96RY7 1462 aa7.61□□□□□ -1.19
CBWD1-214ENST00000483817 EDN3P14138 238 aa7.6□□□□□ -1.19
CBWD1-214ENST00000483817 C19orf57Q0VDD7 668 aa7.6□□□□□ -1.19
CBWD1-214ENST00000483817 ANKRD34AQ69YU3 496 aa7.6□□□□□ -1.19
CBWD1-214ENST00000483817 CILP2Q8IUL8 1156 aa7.6□□□□□ -1.19
CBWD1-214ENST00000483817 FLCNQ8NFG4 579 aa7.6□□□□□ -1.19
CBWD1-214ENST00000483817 BSNDQ8WZ55 320 aa7.6□□□□□ -1.19
CBWD1-214ENST00000483817 NXPE3Q969Y0 559 aa7.6□□□□□ -1.19
CBWD1-214ENST00000483817 RUSC1Q9BVN2 902 aa7.6□□□□□ -1.19
CBWD1-214ENST00000483817 RNF208Q9H0X6 261 aa7.6□□□□□ -1.19
CBWD1-214ENST00000483817 LATS2Q9NRM7 1088 aa7.6□□□□□ -1.19
CBWD1-214ENST00000483817 CCDC87Q9NVE4 849 aa7.6□□□□□ -1.19
CBWD1-214ENST00000483817 BIN1O00499 593 aa7.59□□□□□ -1.19
CBWD1-214ENST00000483817 ARL4DP49703 201 aa7.59□□□□□ -1.19
CBWD1-214ENST00000483817 FKBP4Q02790 459 aaKnown RBP eCLIP7.59□□□□□ -1.19
CBWD1-214ENST00000483817 IKBKEQ14164 716 aa7.59□□□□□ -1.19
CBWD1-214ENST00000483817 GJD3Q8N144 294 aa7.59□□□□□ -1.19
CBWD1-214ENST00000483817 FBXL6Q8N531 539 aa7.59□□□□□ -1.19
CBWD1-214ENST00000483817 ASAP3Q8TDY4 903 aa7.59□□□□□ -1.19
CBWD1-214ENST00000483817 FDX2Q6P4F2 183 aa7.58□□□□□ -1.2
CBWD1-214ENST00000483817 VN1R5Q7Z5H4 357 aa7.58□□□□□ -1.2
CBWD1-214ENST00000483817 AMOTL2Q9Y2J4 779 aa7.58□□□□□ -1.2
CBWD1-214ENST00000483817 ABCC8Q09428 1581 aa7.58□□□□□ -1.2
CBWD1-214ENST00000483817 SOX1O00570 391 aaPredicted RBP7.57□□□□□ -1.2
CBWD1-214ENST00000483817 PEAR1Q5VY43 1037 aaPredicted RBP7.57□□□□□ -1.2
CBWD1-214ENST00000483817 C14orf37Q86TY3 774 aa7.57□□□□□ -1.2
CBWD1-214ENST00000483817 USP26Q9BXU7 913 aa7.57□□□□□ -1.2
CBWD1-214ENST00000483817 BHLHE41Q9C0J9 482 aaPredicted RBP7.57□□□□□ -1.2
CBWD1-214ENST00000483817 MAP4P27816 1152 aaKnown RBP7.56□□□□□ -1.2
CBWD1-214ENST00000483817 SLC38A3Q99624 504 aa7.56□□□□□ -1.2
CBWD1-214ENST00000483817 METTL22Q9BUU2 404 aaPredicted RBP7.56□□□□□ -1.2
CBWD1-214ENST00000483817 JAG2Q9Y219 1238 aa7.56□□□□□ -1.2
CBWD1-214ENST00000483817 CCDC88BA6NC98 1476 aa7.55□□□□□ -1.2
CBWD1-214ENST00000483817 METTL12A8MUP2 240 aa7.55□□□□□ -1.2
CBWD1-214ENST00000483817 GAS2O43903 313 aaKnown RBP7.55□□□□□ -1.2
CBWD1-214ENST00000483817 POLR3DP05423 398 aaPredicted RBP7.55□□□□□ -1.2
CBWD1-214ENST00000483817 BHLHE22Q8NFJ8 381 aaPredicted RBP7.55□□□□□ -1.2
CBWD1-214ENST00000483817 ZFYVE28Q9HCC9 887 aa7.55□□□□□ -1.2
CBWD1-214ENST00000483817 TOPBP1Q92547 1522 aa7.55□□□□□ -1.2
CBWD1-214ENST00000483817 ZNF608Q9ULD9 1512 aaPredicted RBP7.55□□□□□ -1.2
CBWD1-214ENST00000483817 ARHGEF11O15085 1522 aa7.54□□□□□ -1.2
CBWD1-214ENST00000483817 LOC100289279A0A1B0GTE1 492 aa7.54□□□□□ -1.2
CBWD1-214ENST00000483817 H3BRB1 525 aa7.54□□□□□ -1.2
CBWD1-214ENST00000483817 CYP26A1O43174 497 aa7.54□□□□□ -1.2
CBWD1-214ENST00000483817 ESRRAP11474 423 aaPredicted RBP7.54□□□□□ -1.2
CBWD1-214ENST00000483817 SHISA5Q8N114 240 aa7.54□□□□□ -1.2
CBWD1-214ENST00000483817 TUT1Q9H6E5 874 aaKnown RBP7.54□□□□□ -1.2
CBWD1-214ENST00000483817 USTQ9Y2C2 406 aa7.54□□□□□ -1.2
CBWD1-214ENST00000483817 PRDM2Q13029 1718 aa7.54□□□□□ -1.2
CBWD1-214ENST00000483817 RIMBP3CA6NJZ7 1639 aa7.53□□□□□ -1.2
CBWD1-214ENST00000483817 RIMBP3BA6NNM3 1639 aa7.53□□□□□ -1.2
CBWD1-214ENST00000483817 RIMBP3Q9UFD9 1639 aa7.53□□□□□ -1.2
CBWD1-214ENST00000483817 MEGF11A6BM72 1044 aa7.53□□□□□ -1.2
CBWD1-214ENST00000483817 NUTM2GQ5VZR2 741 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms