RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 AOX1Q06278 1338 aa22.16■■□□□ 1.14
HDAC6-225ENST00000483506 MYO1BO43795 1136 aa22.16■■□□□ 1.14
HDAC6-225ENST00000483506 SAPCD2Q86UD0 394 aa22.16■■□□□ 1.14
HDAC6-225ENST00000483506 ZGPATQ8N5A5 531 aaKnown RBP22.16■■□□□ 1.14
HDAC6-225ENST00000483506 TEKT1Q969V4 418 aa22.16■■□□□ 1.14
HDAC6-225ENST00000483506 ZDHHC15Q96MV8 337 aa22.16■■□□□ 1.14
HDAC6-225ENST00000483506 MKRN1Q9UHC7 482 aaKnown RBP22.16■■□□□ 1.14
HDAC6-225ENST00000483506 ABT1Q9ULW3 272 aaKnown RBP22.16■■□□□ 1.14
HDAC6-225ENST00000483506 RBM5P52756 815 aaKnown RBP eCLIP22.15■■□□□ 1.14
HDAC6-225ENST00000483506 SPDYE2Q495Y8 402 aa22.15■■□□□ 1.14
HDAC6-225ENST00000483506 HHIPL2Q6UWX4 724 aa22.15■■□□□ 1.14
HDAC6-225ENST00000483506 ZNF512BQ96KM6 892 aaPredicted RBP22.15■■□□□ 1.14
HDAC6-225ENST00000483506 DBNDD2Q9BQY9 259 aa22.15■■□□□ 1.14
HDAC6-225ENST00000483506 ZNF408Q9H9D4 720 aa22.15■■□□□ 1.14
HDAC6-225ENST00000483506 PCNTO95613 3336 aa22.15■■□□□ 1.14
HDAC6-225ENST00000483506 PAPPA2Q9BXP8 1791 aa22.15■■□□□ 1.14
HDAC6-225ENST00000483506 THSD7BQ9C0I4 1608 aa22.14■■□□□ 1.14
HDAC6-225ENST00000483506 UQCRFS1P1P0C7P4 283 aa22.14■■□□□ 1.13
HDAC6-225ENST00000483506 PRDX5P30044 214 aa22.14■■□□□ 1.13
HDAC6-225ENST00000483506 DEFB115Q30KQ5 88 aa22.14■■□□□ 1.13
HDAC6-225ENST00000483506 GORABQ5T7V8 394 aa22.14■■□□□ 1.13
HDAC6-225ENST00000483506 EAF2Q96CJ1 260 aaPredicted RBP22.14■■□□□ 1.13
HDAC6-225ENST00000483506 GBA2Q9HCG7 927 aaPredicted RBP22.14■■□□□ 1.13
HDAC6-225ENST00000483506 HMG20BQ9P0W2 317 aa22.14■■□□□ 1.13
HDAC6-225ENST00000483506 DBNLQ9UJU6 430 aaKnown RBP22.14■■□□□ 1.13
HDAC6-225ENST00000483506 PPP2R3BQ9Y5P8 575 aa22.14■■□□□ 1.13
HDAC6-225ENST00000483506 AKAP11Q9UKA4 1901 aa22.14■■□□□ 1.13
HDAC6-225ENST00000483506 RAB11FIP3O75154 756 aa22.13■■□□□ 1.13
HDAC6-225ENST00000483506 LDHBP07195 334 aaKnown RBP22.13■■□□□ 1.13
HDAC6-225ENST00000483506 RHPN1Q8TCX5 695 aa22.13■■□□□ 1.13
HDAC6-225ENST00000483506 SCAF8Q9UPN6 1271 aaKnown RBP22.13■■□□□ 1.13
HDAC6-225ENST00000483506 CLRN2A0PK11 232 aa22.12■■□□□ 1.13
HDAC6-225ENST00000483506 MCAMP43121 646 aa22.12■■□□□ 1.13
HDAC6-225ENST00000483506 FKBP1BP68106 108 aa22.12■■□□□ 1.13
HDAC6-225ENST00000483506 APOBEC3HQ6NTF7 200 aaKnown RBP22.12■■□□□ 1.13
HDAC6-225ENST00000483506 C2orf69Q8N8R5 385 aa22.12■■□□□ 1.13
HDAC6-225ENST00000483506 SPATA5Q8NB90 893 aa22.12■■□□□ 1.13
HDAC6-225ENST00000483506 KIF1BPQ96EK5 621 aa22.12■■□□□ 1.13
HDAC6-225ENST00000483506 ZNF70Q9UC06 446 aaPredicted RBP22.12■■□□□ 1.13
HDAC6-225ENST00000483506 VEGFBP49765 207 aa22.11■■□□□ 1.13
HDAC6-225ENST00000483506 CCDC158Q5M9N0 1113 aa22.11■■□□□ 1.13
HDAC6-225ENST00000483506 DEFB129Q9H1M3 183 aa22.11■■□□□ 1.13
HDAC6-225ENST00000483506 TLR7Q9NYK1 1049 aaKnown RBP22.11■■□□□ 1.13
HDAC6-225ENST00000483506 TNFAIP1Q13829 316 aa22.1■■□□□ 1.13
HDAC6-225ENST00000483506 SPTY2D1Q68D10 685 aaPredicted RBP22.1■■□□□ 1.13
HDAC6-225ENST00000483506 PI16Q6UXB8 463 aa22.1■■□□□ 1.13
HDAC6-225ENST00000483506 TDRD3Q9H7E2 651 aaKnown RBP22.1■■□□□ 1.13
HDAC6-225ENST00000483506 TTC39AQ5SRH9 613 aa22.09■■□□□ 1.13
HDAC6-225ENST00000483506 FKBP1CQ5VVH2 108 aa22.09■■□□□ 1.13
HDAC6-225ENST00000483506 CCDC8Q9H0W5 538 aaPredicted RBP22.09■■□□□ 1.13
HDAC6-225ENST00000483506 VEZTQ9HBM0 779 aa22.09■■□□□ 1.13
HDAC6-225ENST00000483506 DAGLAQ9Y4D2 1042 aa22.09■■□□□ 1.13
HDAC6-225ENST00000483506 MYH2Q9UKX2 1941 aa22.09■■□□□ 1.13
HDAC6-225ENST00000483506 GAKO14976 1311 aa22.08■■□□□ 1.13
HDAC6-225ENST00000483506 WDR33Q9C0J8 1336 aaKnown RBP22.08■■□□□ 1.13
HDAC6-225ENST00000483506 ECE1P42892 770 aa22.08■■□□□ 1.13
HDAC6-225ENST00000483506 HUNKP57058 714 aa22.08■■□□□ 1.13
HDAC6-225ENST00000483506 DIXDC1Q155Q3 683 aa22.08■■□□□ 1.13
HDAC6-225ENST00000483506 PRAMEF18Q5VWM3 479 aa22.08■■□□□ 1.13
HDAC6-225ENST00000483506 AACSQ86V21 672 aa22.08■■□□□ 1.13
HDAC6-225ENST00000483506 FAM163AQ96GL9 167 aaPredicted RBP22.08■■□□□ 1.13
HDAC6-225ENST00000483506 CRBNQ96SW2 442 aa22.08■■□□□ 1.13
HDAC6-225ENST00000483506 SSC5DA1L4H1 1573 aa22.08■■□□□ 1.12
HDAC6-225ENST00000483506 IGSF3O75054 1194 aa22.07■■□□□ 1.12
HDAC6-225ENST00000483506 NF2P35240 595 aa22.07■■□□□ 1.12
HDAC6-225ENST00000483506 CLASRPQ8N2M8 674 aaKnown RBP22.07■■□□□ 1.12
HDAC6-225ENST00000483506 CAPNS2Q96L46 248 aa22.07■■□□□ 1.12
HDAC6-225ENST00000483506 IL1RAPL2Q9NP60 686 aa22.07■■□□□ 1.12
HDAC6-225ENST00000483506 ABCF2Q9UG63 623 aa22.07■■□□□ 1.12
HDAC6-225ENST00000483506 PCDHB15Q9Y5E8 787 aa22.07■■□□□ 1.12
HDAC6-225ENST00000483506 MAST2Q6P0Q8 1798 aa22.07■■□□□ 1.12
HDAC6-225ENST00000483506 RASA3Q14644 834 aa22.06■■□□□ 1.12
HDAC6-225ENST00000483506 CYP4F22Q6NT55 531 aa22.06■■□□□ 1.12
HDAC6-225ENST00000483506 ERICH6Q7L0X2 663 aa22.06■■□□□ 1.12
HDAC6-225ENST00000483506 DCTPP1Q9H773 170 aa22.06■■□□□ 1.12
HDAC6-225ENST00000483506 AAMPQ13685 434 aa22.05■■□□□ 1.12
HDAC6-225ENST00000483506 FAM83AQ86UY5 434 aa22.05■■□□□ 1.12
HDAC6-225ENST00000483506 DZIP1Q86YF9 867 aaKnown RBP22.05■■□□□ 1.12
HDAC6-225ENST00000483506 SLF2Q8IX21 1173 aa22.05■■□□□ 1.12
HDAC6-225ENST00000483506 ZNF384Q8TF68 577 aa22.05■■□□□ 1.12
HDAC6-225ENST00000483506 RPAP1Q9BWH6 1393 aaPredicted RBP22.04■■□□□ 1.12
HDAC6-225ENST00000483506 TNNI2P48788 182 aa22.04■■□□□ 1.12
HDAC6-225ENST00000483506 MECOMQ03112 1051 aa22.04■■□□□ 1.12
HDAC6-225ENST00000483506 MAP3K11Q16584 847 aa22.04■■□□□ 1.12
HDAC6-225ENST00000483506 RGMBQ6NW40 437 aa22.04■■□□□ 1.12
HDAC6-225ENST00000483506 TBC1D9Q6ZT07 1266 aa22.04■■□□□ 1.12
HDAC6-225ENST00000483506 NSUN4Q96CB9 384 aaKnown RBP22.04■■□□□ 1.12
HDAC6-225ENST00000483506 TEPSINQ96N21 525 aa22.04■■□□□ 1.12
HDAC6-225ENST00000483506 TMOD2Q9NZR1 351 aa22.04■■□□□ 1.12
HDAC6-225ENST00000483506 TCP10L2B9ZVM9 353 aa22.03■■□□□ 1.12
HDAC6-225ENST00000483506 CYP2E1P05181 493 aaPredicted RBP22.03■■□□□ 1.12
HDAC6-225ENST00000483506 SUPT20HL1Q3ZLR7 823 aa22.03■■□□□ 1.12
HDAC6-225ENST00000483506 CDC42EP5Q6NZY7 148 aa22.03■■□□□ 1.12
HDAC6-225ENST00000483506 MROH7-TTC4A0A0A0MT08 1334 aa22.03■■□□□ 1.12
HDAC6-225ENST00000483506 RFX7Q2KHR2 1363 aa22.02■■□□□ 1.12
HDAC6-225ENST00000483506 DOCK2Q92608 1830 aa22.02■■□□□ 1.12
HDAC6-225ENST00000483506 FAM155AB1AL88 458 aaPredicted RBP22.02■■□□□ 1.12
HDAC6-225ENST00000483506 APBB1O00213 710 aa22.02■■□□□ 1.12
HDAC6-225ENST00000483506 MAP2K2P36507 400 aa22.02■■□□□ 1.12
HDAC6-225ENST00000483506 CACNB3P54284 484 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms