RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 IQCA1LA6NCM1 817 aa21.7■■□□□ 1.07
CPNE1-224ENST00000483359 GLRX3O76003 335 aaKnown RBP21.7■■□□□ 1.07
CPNE1-224ENST00000483359 PAG1Q9NWQ8 432 aa21.7■■□□□ 1.07
CPNE1-224ENST00000483359 GTF3C3Q9Y5Q9 886 aa21.7■■□□□ 1.07
CPNE1-224ENST00000483359 H7C1D1 291 aa21.7■■□□□ 1.06
CPNE1-224ENST00000483359 IDH1O75874 414 aaKnown RBP21.7■■□□□ 1.06
CPNE1-224ENST00000483359 TBC1D10BQ4KMP7 808 aaPredicted RBP21.7■■□□□ 1.06
CPNE1-224ENST00000483359 ERICH6Q7L0X2 663 aa21.7■■□□□ 1.06
CPNE1-224ENST00000483359 DZIP1Q86YF9 867 aaKnown RBP21.7■■□□□ 1.06
CPNE1-224ENST00000483359 ZNF784Q8NCA9 323 aaPredicted RBP21.7■■□□□ 1.06
CPNE1-224ENST00000483359 STAP2Q9UGK3 403 aa21.7■■□□□ 1.06
CPNE1-224ENST00000483359 HDAC9Q9UKV0 1011 aa21.7■■□□□ 1.06
CPNE1-224ENST00000483359 EPHX2P34913 555 aa21.69■■□□□ 1.06
CPNE1-224ENST00000483359 RBM5P52756 815 aaKnown RBP eCLIP21.69■■□□□ 1.062e-6■■■□□ 15.7
CPNE1-224ENST00000483359 DIXDC1Q155Q3 683 aa21.69■■□□□ 1.06
CPNE1-224ENST00000483359 PCDHAC2Q9Y5I4 1007 aa21.69■■□□□ 1.06
CPNE1-224ENST00000483359 TRPM4Q8TD43 1214 aa21.68■■□□□ 1.06
CPNE1-224ENST00000483359 MYOZ2Q9NPC6 264 aa21.68■■□□□ 1.06
CPNE1-224ENST00000483359 VEGFAP15692 232 aaPredicted RBP21.68■■□□□ 1.06
CPNE1-224ENST00000483359 EAPPQ56P03 285 aaPredicted RBP21.68■■□□□ 1.06
CPNE1-224ENST00000483359 SPTY2D1Q68D10 685 aaPredicted RBP21.68■■□□□ 1.06
CPNE1-224ENST00000483359 TAF1DQ9H5J8 278 aaPredicted RBP21.68■■□□□ 1.06
CPNE1-224ENST00000483359 DOCK2Q92608 1830 aa21.68■■□□□ 1.06
CPNE1-224ENST00000483359 RGS3P49796 1198 aa21.67■■□□□ 1.06
CPNE1-224ENST00000483359 ZNF280AP59817 542 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-224ENST00000483359 MECOMQ03112 1051 aa21.67■■□□□ 1.06
CPNE1-224ENST00000483359 KIF4BQ2VIQ3 1234 aa21.67■■□□□ 1.06
CPNE1-224ENST00000483359 ADARB2Q9NS39 739 aaKnown RBP21.67■■□□□ 1.06
CPNE1-224ENST00000483359 SUGT1Q9Y2Z0 365 aa21.67■■□□□ 1.06
CPNE1-224ENST00000483359 MAST2Q6P0Q8 1798 aa21.67■■□□□ 1.06
CPNE1-224ENST00000483359 TTF1Q15361 905 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-224ENST00000483359 MAST3O60307 1309 aa21.66■■□□□ 1.06
CPNE1-224ENST00000483359 CFAP100Q494V2 611 aa21.66■■□□□ 1.06
CPNE1-224ENST00000483359 AOX1Q06278 1338 aa21.66■■□□□ 1.06
CPNE1-224ENST00000483359 POTEIP0CG38 1075 aa21.65■■□□□ 1.06
CPNE1-224ENST00000483359 POTEJP0CG39 1038 aa21.65■■□□□ 1.06
CPNE1-224ENST00000483359 CRKP46108 304 aa21.65■■□□□ 1.06
CPNE1-224ENST00000483359 ZNF384Q8TF68 577 aa21.65■■□□□ 1.06
CPNE1-224ENST00000483359 NSUN4Q96CB9 384 aaKnown RBP21.65■■□□□ 1.06
CPNE1-224ENST00000483359 OSBPL3Q9H4L5 887 aa21.65■■□□□ 1.06
CPNE1-224ENST00000483359 TEKT1Q969V4 418 aa21.65■■□□□ 1.06
CPNE1-224ENST00000483359 MYH2Q9UKX2 1941 aa21.64■■□□□ 1.05
CPNE1-224ENST00000483359 TRIM6-TRIM34B2RNG4 842 aa21.64■■□□□ 1.05
CPNE1-224ENST00000483359 HIRAP54198 1017 aaPredicted RBP21.64■■□□□ 1.05
CPNE1-224ENST00000483359 MAGEB6Q8N7X4 407 aa21.64■■□□□ 1.05
CPNE1-224ENST00000483359 SERPINA10Q9UK55 444 aa21.64■■□□□ 1.05
CPNE1-224ENST00000483359 CHGBP05060 677 aa21.63■■□□□ 1.05
CPNE1-224ENST00000483359 MAP3K12Q12852 859 aa21.63■■□□□ 1.05
CPNE1-224ENST00000483359 DLGAP5Q15398 846 aa21.63■■□□□ 1.05
CPNE1-224ENST00000483359 NBPF9Q3BBW0 867 aa21.63■■□□□ 1.05
CPNE1-224ENST00000483359 ASTN2O75129 1339 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-224ENST00000483359 NAA16Q6N069 864 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-224ENST00000483359 WNT10BO00744 389 aa21.62■■□□□ 1.05
CPNE1-224ENST00000483359 SLFNL1Q499Z3 407 aa21.62■■□□□ 1.05
CPNE1-224ENST00000483359 SLC9C2Q5TAH2 1124 aa21.62■■□□□ 1.05
CPNE1-224ENST00000483359 RILPL2Q969X0 211 aa21.62■■□□□ 1.05
CPNE1-224ENST00000483359 FSD1Q9BTV5 496 aa21.62■■□□□ 1.05
CPNE1-224ENST00000483359 DAGLAQ9Y4D2 1042 aa21.62■■□□□ 1.05
CPNE1-224ENST00000483359 SPDYE2BA6NHP3 402 aa21.61■■□□□ 1.05
CPNE1-224ENST00000483359 SPDYE6P0CI01 402 aa21.61■■□□□ 1.05
CPNE1-224ENST00000483359 GSPT1P15170 499 aaKnown RBP21.61■■□□□ 1.05
CPNE1-224ENST00000483359 USP50Q70EL3 339 aaPredicted RBP21.61■■□□□ 1.05
CPNE1-224ENST00000483359 ADGRA1Q86SQ6 560 aa21.61■■□□□ 1.05
CPNE1-224ENST00000483359 PNMA8AQ86V59 439 aaPredicted RBP21.61■■□□□ 1.05
CPNE1-224ENST00000483359 PRMT6Q96LA8 375 aaPredicted RBP21.61■■□□□ 1.05
CPNE1-224ENST00000483359 CLEC11AQ9Y240 323 aa21.61■■□□□ 1.05
CPNE1-224ENST00000483359 KIF3CO14782 793 aa21.61■■□□□ 1.05
CPNE1-224ENST00000483359 TTC22Q5TAA0 569 aa21.61■■□□□ 1.05
CPNE1-224ENST00000483359 KBTBD3Q8NAB2 608 aa21.61■■□□□ 1.05
CPNE1-224ENST00000483359 MROH7-TTC4A0A0A0MT08 1334 aa21.61■■□□□ 1.05
CPNE1-224ENST00000483359 MYH7P12883 1935 aa21.6■■□□□ 1.05
CPNE1-224ENST00000483359 PDE6AP16499 860 aa21.6■■□□□ 1.05
CPNE1-224ENST00000483359 HDLBPQ00341 1268 aaKnown RBP21.6■■□□□ 1.05
CPNE1-224ENST00000483359 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.6■■□□□ 1.053e-7■■■■■ 27.1
CPNE1-224ENST00000483359 SCAF8Q9UPN6 1271 aaKnown RBP21.6■■□□□ 1.05
CPNE1-224ENST00000483359 CLRN2A0PK11 232 aa21.59■■□□□ 1.05
CPNE1-224ENST00000483359 CYP7A1P22680 504 aa21.59■■□□□ 1.05
CPNE1-224ENST00000483359 GSTO1P78417 241 aa21.59■■□□□ 1.05
CPNE1-224ENST00000483359 HHIPL2Q6UWX4 724 aa21.59■■□□□ 1.05
CPNE1-224ENST00000483359 ZDHHC15Q96MV8 337 aa21.59■■□□□ 1.05
CPNE1-224ENST00000483359 BTDP43251 543 aa21.59■■□□□ 1.05
CPNE1-224ENST00000483359 APOBEC3HQ6NTF7 200 aaKnown RBP21.59■■□□□ 1.05
CPNE1-224ENST00000483359 SLF2Q8IX21 1173 aa21.59■■□□□ 1.05
CPNE1-224ENST00000483359 CNTROBQ8N137 903 aa21.59■■□□□ 1.05
CPNE1-224ENST00000483359 EVI5LQ96CN4 794 aa21.59■■□□□ 1.05
CPNE1-224ENST00000483359 TDRD3Q9H7E2 651 aaKnown RBP21.59■■□□□ 1.05
CPNE1-224ENST00000483359 GGA3Q9NZ52 723 aa21.59■■□□□ 1.05
CPNE1-224ENST00000483359 ZNF532Q9HCE3 1301 aa21.59■■□□□ 1.05
CPNE1-224ENST00000483359 AK9Q5TCS8 1911 aa21.58■■□□□ 1.05
CPNE1-224ENST00000483359 MMP14P50281 582 aa21.58■■□□□ 1.05
CPNE1-224ENST00000483359 ANGEL2Q5VTE6 544 aaKnown RBP21.58■■□□□ 1.05
CPNE1-224ENST00000483359 MIGA1Q8NAN2 632 aa21.58■■□□□ 1.05
CPNE1-224ENST00000483359 ZBED3Q96IU2 234 aaPredicted RBP21.58■■□□□ 1.05
CPNE1-224ENST00000483359 GAKO14976 1311 aa21.58■■□□□ 1.05
CPNE1-224ENST00000483359 CACNB3P54284 484 aa21.57■■□□□ 1.04
CPNE1-224ENST00000483359 MTMR14Q8NCE2 650 aa21.57■■□□□ 1.04
CPNE1-224ENST00000483359 AATFQ9NY61 560 aaKnown RBP eCLIP21.57■■□□□ 1.04
CPNE1-224ENST00000483359 ECM29Q5VYK3 1845 aa21.57■■□□□ 1.04
CPNE1-224ENST00000483359 MYO1BO43795 1136 aa21.57■■□□□ 1.04
CPNE1-224ENST00000483359 ADD2P35612 726 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms