RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 KIAA0100Q14667 2235 aaKnown RBP17.56■□□□□ 0.4
VARS-226ENST00000483275 UBE4AQ14139 1066 aa17.56■□□□□ 0.4
VARS-226ENST00000483275 OTOP1Q7RTM1 612 aa17.56■□□□□ 0.4
VARS-226ENST00000483275 DZIP1LQ8IYY4 767 aaKnown RBP17.56■□□□□ 0.4
VARS-226ENST00000483275 ANKRD44Q8N8A2 993 aa17.56■□□□□ 0.4
VARS-226ENST00000483275 PTPN18Q99952 460 aa17.56■□□□□ 0.4
VARS-226ENST00000483275 RIPOR2Q9Y4F9 1068 aa17.56■□□□□ 0.4
VARS-226ENST00000483275 ALDH1A1P00352 501 aa17.55■□□□□ 0.4
VARS-226ENST00000483275 CRKP46108 304 aa17.55■□□□□ 0.4
VARS-226ENST00000483275 OPTNQ96CV9 577 aa17.55■□□□□ 0.4
VARS-226ENST00000483275 TEPSINQ96N21 525 aa17.55■□□□□ 0.4
VARS-226ENST00000483275 SERPINA10Q9UK55 444 aa17.55■□□□□ 0.4
VARS-226ENST00000483275 RBBP6Q7Z6E9 1792 aaKnown RBP17.55■□□□□ 0.4
VARS-226ENST00000483275 METTL24Q5JXM2 366 aa17.54■□□□□ 0.4
VARS-226ENST00000483275 PRPF38BQ5VTL8 546 aaKnown RBP17.54■□□□□ 0.4
VARS-226ENST00000483275 ANKRD13AQ8IZ07 590 aa17.54■□□□□ 0.4
VARS-226ENST00000483275 UTYO14607 1347 aa17.53■□□□□ 0.4
VARS-226ENST00000483275 ZNF521Q96K83 1311 aa17.53■□□□□ 0.4
VARS-226ENST00000483275 POTEFA5A3E0 1075 aa17.53■□□□□ 0.4
VARS-226ENST00000483275 ZNF316A6NFI3 1004 aaPredicted RBP17.53■□□□□ 0.4
VARS-226ENST00000483275 VGLL4Q14135 290 aa17.53■□□□□ 0.4
VARS-226ENST00000483275 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.53■□□□□ 0.4
VARS-226ENST00000483275 VPS37DQ86XT2 251 aa17.53■□□□□ 0.4
VARS-226ENST00000483275 MRPL50Q8N5N7 158 aaKnown RBP17.53■□□□□ 0.4
VARS-226ENST00000483275 MROH5Q6ZUA9 1318 aa17.52■□□□□ 0.4
VARS-226ENST00000483275 INHBEP58166 350 aa17.52■□□□□ 0.4
VARS-226ENST00000483275 TNFAIP1Q13829 316 aa17.52■□□□□ 0.4
VARS-226ENST00000483275 FBXO33Q7Z6M2 555 aa17.52■□□□□ 0.4
VARS-226ENST00000483275 VGLL2Q8N8G2 317 aa17.52■□□□□ 0.4
VARS-226ENST00000483275 AK9Q5TCS8 1911 aa17.51■□□□□ 0.39
VARS-226ENST00000483275 FRAT2O75474 233 aaPredicted RBP17.51■□□□□ 0.39
VARS-226ENST00000483275 BCAMP50895 628 aa17.51■□□□□ 0.39
VARS-226ENST00000483275 RABL6Q3YEC7 729 aaPredicted RBP17.51■□□□□ 0.39
VARS-226ENST00000483275 BRI3BPQ8WY22 251 aa17.51■□□□□ 0.39
VARS-226ENST00000483275 OTUD5Q96G74 571 aa17.51■□□□□ 0.39
VARS-226ENST00000483275 SSH1Q8WYL5 1049 aa17.5■□□□□ 0.39
VARS-226ENST00000483275 MS4A4AQ96JQ5 239 aa17.5■□□□□ 0.39
VARS-226ENST00000483275 CCL15-CCL14A0A0B4J2E2 113 aa17.49■□□□□ 0.39
VARS-226ENST00000483275 CCL15Q16663 113 aa17.49■□□□□ 0.39
VARS-226ENST00000483275 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.49■□□□□ 0.39
VARS-226ENST00000483275 ERO1AQ96HE7 468 aa17.49■□□□□ 0.39
VARS-226ENST00000483275 TESPA1A2RU30 521 aaPredicted RBP17.48■□□□□ 0.39
VARS-226ENST00000483275 UNCXA6NJT0 531 aa17.48■□□□□ 0.39
VARS-226ENST00000483275 ECM2O94769 699 aaPredicted RBP17.48■□□□□ 0.39
VARS-226ENST00000483275 PDE8BO95263 885 aa17.48■□□□□ 0.39
VARS-226ENST00000483275 CAVIN4Q5BKX8 364 aa17.48■□□□□ 0.39
VARS-226ENST00000483275 OTUD7BQ6GQQ9 843 aa17.48■□□□□ 0.39
VARS-226ENST00000483275 FAM43AQ8N2R8 423 aa17.48■□□□□ 0.39
VARS-226ENST00000483275 TEKT1Q969V4 418 aa17.48■□□□□ 0.39
VARS-226ENST00000483275 PTPN22Q9Y2R2 807 aa17.48■□□□□ 0.39
VARS-226ENST00000483275 MYCP01106 439 aaPredicted RBP17.47■□□□□ 0.39
VARS-226ENST00000483275 TNNI2P48788 182 aa17.47■□□□□ 0.39
VARS-226ENST00000483275 MAP3K9P80192 1104 aa17.47■□□□□ 0.39
VARS-226ENST00000483275 SP3Q02447 781 aa17.47■□□□□ 0.39
VARS-226ENST00000483275 TAF1CQ15572 869 aaPredicted RBP17.47■□□□□ 0.39
VARS-226ENST00000483275 ZKSCAN4Q969J2 545 aaPredicted RBP17.47■□□□□ 0.39
VARS-226ENST00000483275 USP44Q9H0E7 712 aa17.47■□□□□ 0.39
VARS-226ENST00000483275 EFCC1Q9HA90 598 aa17.47■□□□□ 0.39
VARS-226ENST00000483275 CSADQ9Y600 493 aa17.47■□□□□ 0.39
VARS-226ENST00000483275 SNCAIPQ9Y6H5 919 aa17.47■□□□□ 0.39
VARS-226ENST00000483275 CEP290O15078 2479 aa17.46■□□□□ 0.39
VARS-226ENST00000483275 TBC1D22AQ8WUA7 517 aa17.46■□□□□ 0.39
VARS-226ENST00000483275 WRNIP1Q96S55 665 aa17.46■□□□□ 0.39
VARS-226ENST00000483275 PTPRCP08575 1304 aa17.46■□□□□ 0.38
VARS-226ENST00000483275 EN2P19622 333 aaPredicted RBP17.45■□□□□ 0.38
VARS-226ENST00000483275 PUM3Q15397 648 aaKnown RBP17.45■□□□□ 0.38
VARS-226ENST00000483275 APOBEC3HQ6NTF7 200 aaKnown RBP17.45■□□□□ 0.38
VARS-226ENST00000483275 ZDHHC15Q96MV8 337 aa17.45■□□□□ 0.38
VARS-226ENST00000483275 ARHGAP39Q9C0H5 1083 aa17.45■□□□□ 0.38
VARS-226ENST00000483275 SIL1Q9H173 461 aa17.45■□□□□ 0.38
VARS-226ENST00000483275 DOCK2Q92608 1830 aa17.44■□□□□ 0.38
VARS-226ENST00000483275 SPDYE5A6NIY4 337 aa17.44■□□□□ 0.38
VARS-226ENST00000483275 FGFR2P21802 821 aa17.44■□□□□ 0.38
VARS-226ENST00000483275 RFX5P48382 616 aaPredicted RBP17.44■□□□□ 0.38
VARS-226ENST00000483275 GTF2A2P52657 109 aa17.44■□□□□ 0.38
VARS-226ENST00000483275 DIXDC1Q155Q3 683 aa17.44■□□□□ 0.38
VARS-226ENST00000483275 MIGA2Q7L4E1 593 aa17.44■□□□□ 0.38
VARS-226ENST00000483275 CDCA7LQ96GN5 454 aa17.44■□□□□ 0.38
VARS-226ENST00000483275 TMOD2Q9NZR1 351 aa17.44■□□□□ 0.38
VARS-226ENST00000483275 PTCH2Q9Y6C5 1203 aa17.44■□□□□ 0.38
VARS-226ENST00000483275 MYH2Q9UKX2 1941 aa17.43■□□□□ 0.38
VARS-226ENST00000483275 IFIT1P09914 478 aaKnown RBP17.43■□□□□ 0.38
VARS-226ENST00000483275 HDLBPQ00341 1268 aaKnown RBP17.43■□□□□ 0.38
VARS-226ENST00000483275 ARMC5Q96C12 935 aa17.43■□□□□ 0.38
VARS-226ENST00000483275 BTBD19C9JJ37 291 aa17.42■□□□□ 0.38
VARS-226ENST00000483275 EYA2O00167 538 aa17.42■□□□□ 0.38
VARS-226ENST00000483275 IRF6O14896 467 aa17.42■□□□□ 0.38
VARS-226ENST00000483275 SLC5A1P13866 664 aa17.42■□□□□ 0.38
VARS-226ENST00000483275 INPP5BP32019 993 aa17.42■□□□□ 0.38
VARS-226ENST00000483275 TCP10Q12799 353 aa17.42■□□□□ 0.38
VARS-226ENST00000483275 ATG9AQ7Z3C6 839 aa17.42■□□□□ 0.38
VARS-226ENST00000483275 ZFYVE28Q9HCC9 887 aa17.42■□□□□ 0.38
VARS-226ENST00000483275 SMC4Q9NTJ3 1288 aa17.42■□□□□ 0.38
VARS-226ENST00000483275 E9PSI1 815 aa17.41■□□□□ 0.38
VARS-226ENST00000483275 PRDX5P30044 214 aa17.41■□□□□ 0.38
VARS-226ENST00000483275 NFIAQ12857 509 aa17.41■□□□□ 0.38
VARS-226ENST00000483275 DAGLAQ9Y4D2 1042 aa17.41■□□□□ 0.38
VARS-226ENST00000483275 MAST3O60307 1309 aa17.41■□□□□ 0.38
VARS-226ENST00000483275 RPAP1Q9BWH6 1393 aaPredicted RBP17.4■□□□□ 0.38
VARS-226ENST00000483275 SLFN5Q08AF3 891 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms