RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 KIAA1324LA8MWY0 1029 aaPredicted RBP6.3□□□□□ -1.4
LAPTM4A-202ENST00000483117 WDR64B1ANS9 1081 aa6.3□□□□□ -1.4
LAPTM4A-202ENST00000483117 TIAF1O95411 115 aa6.3□□□□□ -1.4
LAPTM4A-202ENST00000483117 PCDH1Q08174 1060 aa6.3□□□□□ -1.4
LAPTM4A-202ENST00000483117 ORC1Q13415 861 aa6.3□□□□□ -1.4
LAPTM4A-202ENST00000483117 ZNF423Q2M1K9 1284 aa6.3□□□□□ -1.4
LAPTM4A-202ENST00000483117 MFSD14AQ96MC6 490 aa6.3□□□□□ -1.4
LAPTM4A-202ENST00000483117 SUGCTQ9HAC7 445 aa6.3□□□□□ -1.4
LAPTM4A-202ENST00000483117 CYP4F12Q9HCS2 524 aa6.3□□□□□ -1.4
LAPTM4A-202ENST00000483117 SUPT5HO00267 1087 aaKnown RBP6.29□□□□□ -1.4
LAPTM4A-202ENST00000483117 NDUFB5O43674 189 aa6.29□□□□□ -1.4
LAPTM4A-202ENST00000483117 CTSBP07858 339 aa6.29□□□□□ -1.4
LAPTM4A-202ENST00000483117 EXOSC6Q5RKV6 272 aaKnown RBP6.29□□□□□ -1.4
LAPTM4A-202ENST00000483117 NRSN2Q9GZP1 204 aa6.29□□□□□ -1.4
LAPTM4A-202ENST00000483117 CLEC4MQ9H2X3 399 aaPredicted RBP6.29□□□□□ -1.4
LAPTM4A-202ENST00000483117 ADAMTS4O75173 837 aa6.28□□□□□ -1.4
LAPTM4A-202ENST00000483117 GRIK1P39086 918 aa6.28□□□□□ -1.4
LAPTM4A-202ENST00000483117 KIAA0319Q5VV43 1072 aa6.28□□□□□ -1.4
LAPTM4A-202ENST00000483117 CDPF1Q6NVV7 123 aa6.28□□□□□ -1.4
LAPTM4A-202ENST00000483117 TXNDC2Q86VQ3 553 aa6.28□□□□□ -1.4
LAPTM4A-202ENST00000483117 SHISA5Q8N114 240 aa6.28□□□□□ -1.4
LAPTM4A-202ENST00000483117 RETREG2Q8NC44 543 aa6.28□□□□□ -1.4
LAPTM4A-202ENST00000483117 FBLIM1Q8WUP2 373 aa6.28□□□□□ -1.4
LAPTM4A-202ENST00000483117 FAM129BQ96TA1 746 aa6.28□□□□□ -1.4
LAPTM4A-202ENST00000483117 NPHS2Q9NP85 383 aa6.28□□□□□ -1.4
LAPTM4A-202ENST00000483117 CPNE3O75131 537 aaKnown RBP6.27□□□□□ -1.41
LAPTM4A-202ENST00000483117 F13BP05160 661 aa6.27□□□□□ -1.41
LAPTM4A-202ENST00000483117 SPINK2P20155 84 aa6.27□□□□□ -1.41
LAPTM4A-202ENST00000483117 MAOBP27338 520 aa6.27□□□□□ -1.41
LAPTM4A-202ENST00000483117 HOXA10P31260 410 aaPredicted RBP6.27□□□□□ -1.41
LAPTM4A-202ENST00000483117 SOX4Q06945 474 aaPredicted RBP6.27□□□□□ -1.41
LAPTM4A-202ENST00000483117 NFKBIBQ15653 356 aa6.27□□□□□ -1.41
LAPTM4A-202ENST00000483117 INTS5Q6P9B9 1019 aaKnown RBP6.27□□□□□ -1.41
LAPTM4A-202ENST00000483117 FBXL6Q8N531 539 aa6.27□□□□□ -1.41
LAPTM4A-202ENST00000483117 C2CD4AQ8NCU7 369 aaPredicted RBP6.27□□□□□ -1.41
LAPTM4A-202ENST00000483117 EHD4Q9H223 541 aa6.27□□□□□ -1.41
LAPTM4A-202ENST00000483117 FAM95CA0A1B0GW59 222 aa6.26□□□□□ -1.41
LAPTM4A-202ENST00000483117 ECEL1O95672 775 aa6.26□□□□□ -1.41
LAPTM4A-202ENST00000483117 NEFLP07196 543 aa6.26□□□□□ -1.41
LAPTM4A-202ENST00000483117 USP11P51784 963 aa6.26□□□□□ -1.41
LAPTM4A-202ENST00000483117 PDE3BQ13370 1112 aa6.26□□□□□ -1.41
LAPTM4A-202ENST00000483117 POU4F3Q15319 338 aa6.26□□□□□ -1.41
LAPTM4A-202ENST00000483117 CCER1Q8TC90 406 aaPredicted RBP6.26□□□□□ -1.41
LAPTM4A-202ENST00000483117 NIF3L1Q9GZT8 377 aa6.26□□□□□ -1.41
LAPTM4A-202ENST00000483117 ZNF576Q9H609 170 aa6.26□□□□□ -1.41
LAPTM4A-202ENST00000483117 OAS3Q9Y6K5 1087 aaKnown RBP6.26□□□□□ -1.41
LAPTM4A-202ENST00000483117 GPR182O15218 404 aa6.25□□□□□ -1.41
LAPTM4A-202ENST00000483117 IGHA2P01877 340 aa6.25□□□□□ -1.41
LAPTM4A-202ENST00000483117 CYP11A1P05108 521 aa6.25□□□□□ -1.41
LAPTM4A-202ENST00000483117 ADH5P11766 374 aa6.25□□□□□ -1.41
LAPTM4A-202ENST00000483117 GP2P55259 537 aaKnown RBP6.25□□□□□ -1.41
LAPTM4A-202ENST00000483117 JAG1P78504 1218 aa6.25□□□□□ -1.41
LAPTM4A-202ENST00000483117 DTX1Q86Y01 620 aa6.25□□□□□ -1.41
LAPTM4A-202ENST00000483117 TMC1Q8TDI8 760 aa6.25□□□□□ -1.41
LAPTM4A-202ENST00000483117 TRIM56Q9BRZ2 755 aaKnown RBP6.25□□□□□ -1.41
LAPTM4A-202ENST00000483117 ATG3Q9NT62 314 aa6.25□□□□□ -1.41
LAPTM4A-202ENST00000483117 EIF1AYO14602 144 aaKnown RBP6.24□□□□□ -1.41
LAPTM4A-202ENST00000483117 ADMP35318 185 aa6.24□□□□□ -1.41
LAPTM4A-202ENST00000483117 AKAP4Q5JQC9 854 aa6.24□□□□□ -1.41
LAPTM4A-202ENST00000483117 PAOXQ6QHF9 649 aa6.24□□□□□ -1.41
LAPTM4A-202ENST00000483117 CCDC74AQ96AQ1 378 aa6.24□□□□□ -1.41
LAPTM4A-202ENST00000483117 CITED4Q96RK1 184 aa6.24□□□□□ -1.41
LAPTM4A-202ENST00000483117 PIM2Q9P1W9 311 aa6.24□□□□□ -1.41
LAPTM4A-202ENST00000483117 ACTL7BQ9Y614 415 aa6.24□□□□□ -1.41
LAPTM4A-202ENST00000483117 EIF4EBP3O60516 100 aaPredicted RBP6.23□□□□□ -1.41
LAPTM4A-202ENST00000483117 GADD45BO75293 160 aaPredicted RBP6.23□□□□□ -1.41
LAPTM4A-202ENST00000483117 B3GALT4O96024 378 aa6.23□□□□□ -1.41
LAPTM4A-202ENST00000483117 ITPKAP23677 461 aa6.23□□□□□ -1.41
LAPTM4A-202ENST00000483117 EZH1Q92800 747 aaPredicted RBP6.23□□□□□ -1.41
LAPTM4A-202ENST00000483117 OSBPL1AQ9BXW6 950 aa6.23□□□□□ -1.41
LAPTM4A-202ENST00000483117 ABCB6Q9NP58 842 aa6.23□□□□□ -1.41
LAPTM4A-202ENST00000483117 RAD18Q9NS91 495 aa6.23□□□□□ -1.41
LAPTM4A-202ENST00000483117 LEMD3Q9Y2U8 911 aa6.23□□□□□ -1.41
LAPTM4A-202ENST00000483117 RAB6AP20340 208 aa6.22□□□□□ -1.41
LAPTM4A-202ENST00000483117 IRAK1P51617 712 aa6.22□□□□□ -1.41
LAPTM4A-202ENST00000483117 ZNF157P51786 506 aaPredicted RBP6.22□□□□□ -1.41
LAPTM4A-202ENST00000483117 DYMQ7RTS9 669 aa6.22□□□□□ -1.41
LAPTM4A-202ENST00000483117 GIMAP7Q8NHV1 300 aa6.22□□□□□ -1.41
LAPTM4A-202ENST00000483117 TBC1D32Q96NH3 1257 aa6.22□□□□□ -1.41
LAPTM4A-202ENST00000483117 CORO1BQ9BR76 489 aa6.22□□□□□ -1.41
LAPTM4A-202ENST00000483117 YIPF2Q9BWQ6 316 aa6.22□□□□□ -1.41
LAPTM4A-202ENST00000483117 DNAJC25Q9H1X3 360 aa6.22□□□□□ -1.41
LAPTM4A-202ENST00000483117 PRKAG2Q9UGJ0 569 aa6.22□□□□□ -1.41
LAPTM4A-202ENST00000483117 AP4E1Q9UPM8 1137 aa6.22□□□□□ -1.41
LAPTM4A-202ENST00000483117 TMEM238LA0A1B0GVL6 79 aa6.21□□□□□ -1.42
LAPTM4A-202ENST00000483117 WNT11O96014 354 aa6.21□□□□□ -1.42
LAPTM4A-202ENST00000483117 NFICP08651 508 aa6.21□□□□□ -1.42
LAPTM4A-202ENST00000483117 PDE3AQ14432 1141 aa6.21□□□□□ -1.42
LAPTM4A-202ENST00000483117 EPS8L3Q8TE67 593 aaKnown RBP6.21□□□□□ -1.42
LAPTM4A-202ENST00000483117 CSRNP1Q96S65 589 aa6.21□□□□□ -1.42
LAPTM4A-202ENST00000483117 FAM105AQ9NUU6 356 aa6.21□□□□□ -1.42
LAPTM4A-202ENST00000483117 RNF114Q9Y508 228 aa6.21□□□□□ -1.42
LAPTM4A-202ENST00000483117 SOWAHDA6NJG2 315 aa6.2□□□□□ -1.42
LAPTM4A-202ENST00000483117 FAM170BA6NMN3 283 aa6.2□□□□□ -1.42
LAPTM4A-202ENST00000483117 FOSL1P15407 271 aa6.2□□□□□ -1.42
LAPTM4A-202ENST00000483117 PTPN12Q05209 780 aaKnown RBP6.2□□□□□ -1.42
LAPTM4A-202ENST00000483117 FAAP100Q0VG06 881 aa6.2□□□□□ -1.42
LAPTM4A-202ENST00000483117 GRM2Q14416 872 aa6.2□□□□□ -1.42
LAPTM4A-202ENST00000483117 MSMPQ1L6U9 139 aa6.2□□□□□ -1.42
LAPTM4A-202ENST00000483117 HP1BP3Q5SSJ5 553 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms