RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 ZBTB48P10074 688 aaPredicted RBP20.76■□□□□ 0.91
RAB11FIP3-209ENST00000483002 SOX10P56693 466 aa20.76■□□□□ 0.91
RAB11FIP3-209ENST00000483002 TBC1D22AQ8WUA7 517 aa20.76■□□□□ 0.91
RAB11FIP3-209ENST00000483002 IFIT1P09914 478 aaKnown RBP20.75■□□□□ 0.91
RAB11FIP3-209ENST00000483002 PUM3Q15397 648 aaKnown RBP20.75■□□□□ 0.91
RAB11FIP3-209ENST00000483002 PKN2Q16513 984 aaKnown RBP20.75■□□□□ 0.91
RAB11FIP3-209ENST00000483002 NOM1Q5C9Z4 860 aaKnown RBP20.75■□□□□ 0.91
RAB11FIP3-209ENST00000483002 IFNL1Q8IU54 200 aa20.75■□□□□ 0.91
RAB11FIP3-209ENST00000483002 ANKRD13AQ8IZ07 590 aa20.75■□□□□ 0.91
RAB11FIP3-209ENST00000483002 TRMT2AQ8IZ69 625 aaKnown RBP20.75■□□□□ 0.91
RAB11FIP3-209ENST00000483002 EYA2O00167 538 aa20.74■□□□□ 0.91
RAB11FIP3-209ENST00000483002 FKTNO75072 461 aa20.74■□□□□ 0.91
RAB11FIP3-209ENST00000483002 RFX5P48382 616 aaPredicted RBP20.74■□□□□ 0.91
RAB11FIP3-209ENST00000483002 TNNI2P48788 182 aa20.74■□□□□ 0.91
RAB11FIP3-209ENST00000483002 CDAN1Q8IWY9 1227 aa20.74■□□□□ 0.91
RAB11FIP3-209ENST00000483002 CFHR5Q9BXR6 569 aa20.74■□□□□ 0.91
RAB11FIP3-209ENST00000483002 TMEM39BQ9GZU3 492 aa20.74■□□□□ 0.91
RAB11FIP3-209ENST00000483002 NOB1Q9ULX3 412 aaKnown RBP20.74■□□□□ 0.91
RAB11FIP3-209ENST00000483002 HPS5Q9UPZ3 1129 aa20.74■□□□□ 0.91
RAB11FIP3-209ENST00000483002 UBTFL1P0CB47 393 aaPredicted RBP20.73■□□□□ 0.91
RAB11FIP3-209ENST00000483002 FGFR2P21802 821 aa20.73■□□□□ 0.91
RAB11FIP3-209ENST00000483002 HDLBPQ00341 1268 aaKnown RBP20.73■□□□□ 0.91
RAB11FIP3-209ENST00000483002 TEKT1Q969V4 418 aa20.73■□□□□ 0.91
RAB11FIP3-209ENST00000483002 TEPSINQ96N21 525 aa20.73■□□□□ 0.91
RAB11FIP3-209ENST00000483002 IGF2BP3O00425 579 aaKnown RBP eCLIP20.72■□□□□ 0.91
RAB11FIP3-209ENST00000483002 GJA5P36382 358 aa20.72■□□□□ 0.91
RAB11FIP3-209ENST00000483002 CACNB3P54284 484 aa20.72■□□□□ 0.91
RAB11FIP3-209ENST00000483002 ELP3Q9H9T3 547 aa20.72■□□□□ 0.91
RAB11FIP3-209ENST00000483002 SLC5A1P13866 664 aa20.71■□□□□ 0.91
RAB11FIP3-209ENST00000483002 LPIN2Q92539 896 aa20.71■□□□□ 0.91
RAB11FIP3-209ENST00000483002 SIL1Q9H173 461 aa20.71■□□□□ 0.91
RAB11FIP3-209ENST00000483002 CT47B1P0C2W7 299 aaPredicted RBP20.7■□□□□ 0.9
RAB11FIP3-209ENST00000483002 OTUD7BQ6GQQ9 843 aa20.7■□□□□ 0.9
RAB11FIP3-209ENST00000483002 ATG9AQ7Z3C6 839 aa20.7■□□□□ 0.9
RAB11FIP3-209ENST00000483002 OPTNQ96CV9 577 aa20.7■□□□□ 0.9
RAB11FIP3-209ENST00000483002 MRIQ9BWK5 157 aa20.7■□□□□ 0.9
RAB11FIP3-209ENST00000483002 KIF16BQ96L93 1317 aa20.7■□□□□ 0.9
RAB11FIP3-209ENST00000483002 MAP3K9P80192 1104 aa20.69■□□□□ 0.9
RAB11FIP3-209ENST00000483002 FBXO46Q6PJ61 603 aaPredicted RBP20.69■□□□□ 0.9
RAB11FIP3-209ENST00000483002 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.69■□□□□ 0.9
RAB11FIP3-209ENST00000483002 ZDHHC15Q96MV8 337 aa20.69■□□□□ 0.9
RAB11FIP3-209ENST00000483002 API5Q9BZZ5 524 aaKnown RBP20.69■□□□□ 0.9
RAB11FIP3-209ENST00000483002 TMOD2Q9NZR1 351 aa20.69■□□□□ 0.9
RAB11FIP3-209ENST00000483002 SUGT1Q9Y2Z0 365 aa20.69■□□□□ 0.9
RAB11FIP3-209ENST00000483002 ARAP2Q8WZ64 1704 aa20.69■□□□□ 0.9
RAB11FIP3-209ENST00000483002 APOBEC3HQ6NTF7 200 aaKnown RBP20.68■□□□□ 0.9
RAB11FIP3-209ENST00000483002 WDR66Q8TBY9 1149 aa20.68■□□□□ 0.9
RAB11FIP3-209ENST00000483002 PTPN18Q99952 460 aa20.68■□□□□ 0.9
RAB11FIP3-209ENST00000483002 CEP126Q9P2H0 1117 aa20.68■□□□□ 0.9
RAB11FIP3-209ENST00000483002 LRRFIP2Q9Y608 721 aaKnown RBP20.68■□□□□ 0.9
RAB11FIP3-209ENST00000483002 MAST3O60307 1309 aa20.68■□□□□ 0.9
RAB11FIP3-209ENST00000483002 CNKSR2Q8WXI2 1034 aa20.67■□□□□ 0.9
RAB11FIP3-209ENST00000483002 CSADQ9Y600 493 aa20.67■□□□□ 0.9
RAB11FIP3-209ENST00000483002 PDE4DIPQ5VU43 2346 aa20.67■□□□□ 0.9
RAB11FIP3-209ENST00000483002 TESPA1A2RU30 521 aaPredicted RBP20.66■□□□□ 0.9
RAB11FIP3-209ENST00000483002 CCER2I3L3R5 266 aa20.66■□□□□ 0.9
RAB11FIP3-209ENST00000483002 CIAO1O76071 339 aa20.66■□□□□ 0.9
RAB11FIP3-209ENST00000483002 CRHR2Q13324 411 aa20.66■□□□□ 0.9
RAB11FIP3-209ENST00000483002 VGLL4Q14135 290 aa20.66■□□□□ 0.9
RAB11FIP3-209ENST00000483002 ATP2B3Q16720 1220 aa20.66■□□□□ 0.9
RAB11FIP3-209ENST00000483002 HHIPL2Q6UWX4 724 aa20.66■□□□□ 0.9
RAB11FIP3-209ENST00000483002 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.66■□□□□ 0.9
RAB11FIP3-209ENST00000483002 FBXO3Q9UK99 471 aa20.66■□□□□ 0.9
RAB11FIP3-209ENST00000483002 HDAC5Q9UQL6 1122 aa20.66■□□□□ 0.9
RAB11FIP3-209ENST00000483002 TRIM17Q9Y577 477 aa20.66■□□□□ 0.9
RAB11FIP3-209ENST00000483002 RARSP54136 660 aaKnown RBP20.65■□□□□ 0.9
RAB11FIP3-209ENST00000483002 MS4A4AQ96JQ5 239 aa20.65■□□□□ 0.9
RAB11FIP3-209ENST00000483002 PA2G4Q9UQ80 394 aaKnown RBP20.65■□□□□ 0.9
RAB11FIP3-209ENST00000483002 FKBP1CQ5VVH2 108 aa20.64■□□□□ 0.89
RAB11FIP3-209ENST00000483002 FAM83AQ86UY5 434 aa20.64■□□□□ 0.89
RAB11FIP3-209ENST00000483002 OTUD5Q96G74 571 aa20.64■□□□□ 0.89
RAB11FIP3-209ENST00000483002 MEIS3Q99687 375 aa20.64■□□□□ 0.89
RAB11FIP3-209ENST00000483002 GNL3LQ9NVN8 582 aaKnown RBP20.64■□□□□ 0.89
RAB11FIP3-209ENST00000483002 OTOFQ9HC10 1997 aa20.63■□□□□ 0.89
RAB11FIP3-209ENST00000483002 CCL15-CCL14A0A0B4J2E2 113 aa20.63■□□□□ 0.89
RAB11FIP3-209ENST00000483002 IL15P40933 162 aaPredicted RBP20.63■□□□□ 0.89
RAB11FIP3-209ENST00000483002 CCL15Q16663 113 aa20.63■□□□□ 0.89
RAB11FIP3-209ENST00000483002 OTOP1Q7RTM1 612 aa20.63■□□□□ 0.89
RAB11FIP3-209ENST00000483002 BRI3BPQ8WY22 251 aa20.63■□□□□ 0.89
RAB11FIP3-209ENST00000483002 GTF2A2P52657 109 aa20.62■□□□□ 0.89
RAB11FIP3-209ENST00000483002 DIXDC1Q155Q3 683 aa20.62■□□□□ 0.89
RAB11FIP3-209ENST00000483002 CD99L2Q8TCZ2 262 aa20.62■□□□□ 0.89
RAB11FIP3-209ENST00000483002 ZKSCAN4Q969J2 545 aaPredicted RBP20.62■□□□□ 0.89
RAB11FIP3-209ENST00000483002 HOOK2Q96ED9 719 aa20.62■□□□□ 0.89
RAB11FIP3-209ENST00000483002 ERO1AQ96HE7 468 aa20.62■□□□□ 0.89
RAB11FIP3-209ENST00000483002 WRNIP1Q96S55 665 aa20.62■□□□□ 0.89
RAB11FIP3-209ENST00000483002 LDHBP07195 334 aaKnown RBP20.61■□□□□ 0.89
RAB11FIP3-209ENST00000483002 PRDX5P30044 214 aa20.61■□□□□ 0.89
RAB11FIP3-209ENST00000483002 PHKA1P46020 1223 aa20.61■□□□□ 0.89
RAB11FIP3-209ENST00000483002 SP3Q02447 781 aa20.61■□□□□ 0.89
RAB11FIP3-209ENST00000483002 MIGA2Q7L4E1 593 aa20.61■□□□□ 0.89
RAB11FIP3-209ENST00000483002 COPRSQ9NQ92 184 aa20.61■□□□□ 0.89
RAB11FIP3-209ENST00000483002 DAGLAQ9Y4D2 1042 aa20.61■□□□□ 0.89
RAB11FIP3-209ENST00000483002 MYH13Q9UKX3 1938 aa20.61■□□□□ 0.89
RAB11FIP3-209ENST00000483002 LAMB1P07942 1786 aa20.6■□□□□ 0.89
RAB11FIP3-209ENST00000483002 TCP10Q12799 353 aa20.6■□□□□ 0.89
RAB11FIP3-209ENST00000483002 TAF1CQ15572 869 aaPredicted RBP20.6■□□□□ 0.89
RAB11FIP3-209ENST00000483002 DCAF15Q66K64 600 aa20.6■□□□□ 0.89
RAB11FIP3-209ENST00000483002 INTS3Q68E01 1043 aaKnown RBP20.6■□□□□ 0.89
RAB11FIP3-209ENST00000483002 CDC42EP5Q6NZY7 148 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms