RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 PCDHB11Q9Y5F2 797 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 MRVI1Q9Y6F6 885 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 KDM3BQ7LBC6 1761 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 KIF15Q9NS87 1388 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 A0A1W2PRU2 124 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 ESYT3A0FGR9 886 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 HSPA1LP34931 641 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 IRS1P35568 1242 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 RAB15P59190 212 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 SPC25Q9HBM1 224 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 FANCLQ9NW38 375 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 LAMB4A4D0S4 1761 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 N4BP2Q86UW6 1770 aaPredicted RBP4.47□□□□□ -1.69
SMC6-208ENST00000481708 GNA15P30679 374 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 KCNC4Q03721 635 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 INTS6LQ5JSJ4 861 aaKnown RBP4.47□□□□□ -1.69
SMC6-208ENST00000481708 CLEC4GQ6UXB4 293 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 KIAA0907Q7Z7F0 614 aaPredicted RBP4.47□□□□□ -1.69
SMC6-208ENST00000481708 CELF2-AS1Q8N7Q2 184 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 ANKLE1Q8NAG6 615 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 KCTD15Q96SI1 283 aaPredicted RBP4.47□□□□□ -1.69
SMC6-208ENST00000481708 CD163L1Q9NR16 1453 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 S100BP04271 92 aaPredicted RBP4.46□□□□□ -1.69
SMC6-208ENST00000481708 HNRNPLLQ8WVV9 542 aaKnown RBP4.46□□□□□ -1.69
SMC6-208ENST00000481708 MAGEC2Q9UBF1 373 aaPredicted RBP4.46□□□□□ -1.69
SMC6-208ENST00000481708 KAT6BQ8WYB5 2073 aa4.46□□□□□ -1.69
SMC6-208ENST00000481708 DNAJC6O75061 913 aa4.46□□□□□ -1.7
SMC6-208ENST00000481708 ATP1A2P50993 1020 aa4.46□□□□□ -1.7
SMC6-208ENST00000481708 ERMP1Q7Z2K6 904 aa4.46□□□□□ -1.7
SMC6-208ENST00000481708 TRIM50Q86XT4 487 aa4.46□□□□□ -1.7
SMC6-208ENST00000481708 GJD3Q8N144 294 aa4.46□□□□□ -1.7
SMC6-208ENST00000481708 QTRT2Q9H974 415 aaKnown RBP4.46□□□□□ -1.7
SMC6-208ENST00000481708 ERVH48-1M5A8F1 160 aa4.46□□□□□ -1.7
SMC6-208ENST00000481708 PLCB3Q01970 1234 aa4.46□□□□□ -1.7
SMC6-208ENST00000481708 COL26A1Q96A83 441 aa4.46□□□□□ -1.7
SMC6-208ENST00000481708 EID1Q9Y6B2 187 aa4.46□□□□□ -1.7
SMC6-208ENST00000481708 ZBTB24O43167 697 aaPredicted RBP4.46□□□□□ -1.7
SMC6-208ENST00000481708 GRM5P41594 1212 aa4.46□□□□□ -1.7
SMC6-208ENST00000481708 SEPT12Q8IYM1 358 aa4.46□□□□□ -1.7
SMC6-208ENST00000481708 ANKRD50Q9ULJ7 1429 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 A6NHS1 94 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 STK10O94804 968 aaKnown RBP4.45□□□□□ -1.7
SMC6-208ENST00000481708 GNALP38405 381 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 GYS2P54840 703 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 HSP90AB4PQ58FF6 505 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 RNF187Q5TA31 235 aaPredicted RBP4.45□□□□□ -1.7
SMC6-208ENST00000481708 RNF20Q5VTR2 975 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 ZNF654Q8IZM8 581 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 IL17RAQ96F46 866 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 ZNF512BQ96KM6 892 aaPredicted RBP4.45□□□□□ -1.7
SMC6-208ENST00000481708 GNL3LQ9NVN8 582 aaKnown RBP4.45□□□□□ -1.7
SMC6-208ENST00000481708 AK5Q9Y6K8 562 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 TLL2Q9Y6L7 1015 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 CCDC189A1A4V9 331 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 MAFGO15525 162 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 SCNN1DP51172 638 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 PRPF38AQ8NAV1 312 aaKnown RBP4.45□□□□□ -1.7
SMC6-208ENST00000481708 RASGRP4Q8TDF6 673 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 TRIM56Q9BRZ2 755 aaKnown RBP4.45□□□□□ -1.7
SMC6-208ENST00000481708 TSPAN10Q9H1Z9 355 aaPredicted RBP4.45□□□□□ -1.7
SMC6-208ENST00000481708 ZNF358Q9NW07 568 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 LEMD3Q9Y2U8 911 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 TNS3Q68CZ2 1445 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 MRC1P22897 1456 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 LRPPRCP42704 1394 aaKnown RBP4.45□□□□□ -1.7
SMC6-208ENST00000481708 HCLS1P14317 486 aaPredicted RBP4.45□□□□□ -1.7
SMC6-208ENST00000481708 VARSP26640 1264 aaKnown RBP4.45□□□□□ -1.7
SMC6-208ENST00000481708 WNT7BP56706 349 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 MAP3K10Q02779 954 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 HSP90AB2PQ58FF8 381 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 TBCELQ5QJ74 424 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 SRPK1Q96SB4 655 aaKnown RBP4.45□□□□□ -1.7
SMC6-208ENST00000481708 NEUROD4Q9HD90 331 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 TMPRSS4Q9NRS4 437 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 MAP4K5Q9Y4K4 846 aa4.45□□□□□ -1.7
SMC6-208ENST00000481708 FER1L6Q2WGJ9 1857 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 DDX60Q8IY21 1712 aaKnown RBP4.44□□□□□ -1.7
SMC6-208ENST00000481708 RPGRIP1LQ68CZ1 1315 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 FAM13AO94988 1023 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 MASP1P48740 699 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 USP4Q13107 963 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 LIAT1Q6ZQX7 453 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 VASH1Q7L8A9 365 aaPredicted RBP4.44□□□□□ -1.7
SMC6-208ENST00000481708 RNF166Q96A37 237 aaPredicted RBP4.44□□□□□ -1.7
SMC6-208ENST00000481708 HCSTQ9UBK5 93 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 VIL1P09327 827 aaKnown RBP4.44□□□□□ -1.7
SMC6-208ENST00000481708 ERVK-9P63128 1117 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 USPL1Q5W0Q7 1092 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 SPNS2Q8IVW8 549 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 ETFBKMTQ8IXQ9 262 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 TNS4Q8IZW8 715 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 THEMISQ8N1K5 641 aaPredicted RBP4.44□□□□□ -1.7
SMC6-208ENST00000481708 FAM169BQ8N8A8 192 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 POLIQ9UNA4 740 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 MSRB2Q9Y3D2 182 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 USP3Q9Y6I4 520 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 DISP3Q9P2K9 1392 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 CCDC85CA6NKD9 419 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 SIAH2O43255 324 aa4.44□□□□□ -1.7
SMC6-208ENST00000481708 PTCD1O75127 700 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms