RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 MAP3K9P80192 1104 aa22.09■■□□□ 1.13
RXRB-203ENST00000481441 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.09■■□□□ 1.13
RXRB-203ENST00000481441 CHMP3Q9Y3E7 222 aa22.09■■□□□ 1.13
RXRB-203ENST00000481441 PLIN1O60240 522 aa22.08■■□□□ 1.13
RXRB-203ENST00000481441 DZIP1LQ8IYY4 767 aaKnown RBP22.08■■□□□ 1.13
RXRB-203ENST00000481441 ZNF594Q96JF6 807 aaPredicted RBP22.08■■□□□ 1.13
RXRB-203ENST00000481441 TMEM39BQ9GZU3 492 aa22.08■■□□□ 1.13
RXRB-203ENST00000481441 TCP10L2B9ZVM9 353 aa22.07■■□□□ 1.12
RXRB-203ENST00000481441 H0YGN5 161 aa22.07■■□□□ 1.12
RXRB-203ENST00000481441 CCDC27Q2M243 656 aa22.07■■□□□ 1.12
RXRB-203ENST00000481441 EPHA10Q5JZY3 1008 aa22.07■■□□□ 1.12
RXRB-203ENST00000481441 LMBR1LQ6UX01 489 aa22.07■■□□□ 1.12
RXRB-203ENST00000481441 LDHAL6AQ6ZMR3 332 aa22.07■■□□□ 1.12
RXRB-203ENST00000481441 OTUD5Q96G74 571 aa22.07■■□□□ 1.12
RXRB-203ENST00000481441 MYCP01106 439 aaPredicted RBP22.06■■□□□ 1.12
RXRB-203ENST00000481441 WWC1Q8IX03 1113 aa22.06■■□□□ 1.12
RXRB-203ENST00000481441 SH3TC2Q8TF17 1288 aa22.06■■□□□ 1.12
RXRB-203ENST00000481441 ARHGAP39Q9C0H5 1083 aa22.06■■□□□ 1.12
RXRB-203ENST00000481441 CSADQ9Y600 493 aa22.06■■□□□ 1.12
RXRB-203ENST00000481441 SPDYE5A6NIY4 337 aa22.06■■□□□ 1.12
RXRB-203ENST00000481441 TLR2O60603 784 aa22.06■■□□□ 1.12
RXRB-203ENST00000481441 CRKP46108 304 aa22.06■■□□□ 1.12
RXRB-203ENST00000481441 GYG1P46976 350 aa22.06■■□□□ 1.12
RXRB-203ENST00000481441 TNNI2P48788 182 aa22.06■■□□□ 1.12
RXRB-203ENST00000481441 LACTBP83111 547 aaPredicted RBP22.06■■□□□ 1.12
RXRB-203ENST00000481441 CCDC57Q2TAC2 916 aa22.06■■□□□ 1.12
RXRB-203ENST00000481441 CNNM1Q9NRU3 951 aa22.06■■□□□ 1.12
RXRB-203ENST00000481441 HIBADHP31937 336 aaKnown RBP22.05■■□□□ 1.12
RXRB-203ENST00000481441 BEND3Q5T5X7 828 aa22.05■■□□□ 1.12
RXRB-203ENST00000481441 FAM84BQ96KN1 310 aaPredicted RBP22.05■■□□□ 1.12
RXRB-203ENST00000481441 IL16Q14005 1332 aa22.04■■□□□ 1.12
RXRB-203ENST00000481441 CETPP11597 493 aa22.04■■□□□ 1.12
RXRB-203ENST00000481441 UBE4AQ14139 1066 aa22.04■■□□□ 1.12
RXRB-203ENST00000481441 ZCCHC17Q9NP64 241 aaKnown RBP22.04■■□□□ 1.12
RXRB-203ENST00000481441 SNCAIPQ9Y6H5 919 aa22.04■■□□□ 1.12
RXRB-203ENST00000481441 BTBD19C9JJ37 291 aa22.03■■□□□ 1.12
RXRB-203ENST00000481441 F6X3S4 739 aa22.03■■□□□ 1.12
RXRB-203ENST00000481441 WDHD1O75717 1129 aaPredicted RBP22.03■■□□□ 1.12
RXRB-203ENST00000481441 GNRH1P01148 92 aa22.03■■□□□ 1.12
RXRB-203ENST00000481441 GRIK5Q16478 980 aa22.03■■□□□ 1.12
RXRB-203ENST00000481441 TAF7LQ5H9L4 462 aa22.03■■□□□ 1.12
RXRB-203ENST00000481441 ERO1BQ86YB8 467 aa22.03■■□□□ 1.12
RXRB-203ENST00000481441 VAMP4O75379 141 aa22.02■■□□□ 1.12
RXRB-203ENST00000481441 KIF22Q14807 665 aa22.02■■□□□ 1.12
RXRB-203ENST00000481441 GRM8O00222 908 aa22.01■■□□□ 1.11
RXRB-203ENST00000481441 PRMT2P55345 433 aa22.01■■□□□ 1.11
RXRB-203ENST00000481441 SHISA4Q96DD7 197 aa22.01■■□□□ 1.11
RXRB-203ENST00000481441 FANCIQ9NVI1 1328 aa22■■□□□ 1.11
RXRB-203ENST00000481441 IRF6O14896 467 aa22■■□□□ 1.11
RXRB-203ENST00000481441 CACNB3P54284 484 aa22■■□□□ 1.11
RXRB-203ENST00000481441 HDLBPQ00341 1268 aaKnown RBP22■■□□□ 1.11
RXRB-203ENST00000481441 SNAPC2Q13487 334 aa22■■□□□ 1.11
RXRB-203ENST00000481441 CHRDL2Q6WN34 429 aa22■■□□□ 1.11
RXRB-203ENST00000481441 ZKSCAN4Q969J2 545 aaPredicted RBP22■■□□□ 1.11
RXRB-203ENST00000481441 PPIL2Q13356 520 aa21.99■■□□□ 1.11
RXRB-203ENST00000481441 MTFR1Q15390 333 aa21.99■■□□□ 1.11
RXRB-203ENST00000481441 WRNIP1Q96S55 665 aa21.99■■□□□ 1.11
RXRB-203ENST00000481441 PUS3Q9BZE2 481 aaKnown RBP21.99■■□□□ 1.11
RXRB-203ENST00000481441 SZT2Q5T011 3432 aa21.98■■□□□ 1.11
RXRB-203ENST00000481441 CTGFP29279 349 aa21.98■■□□□ 1.11
RXRB-203ENST00000481441 C17orf99Q6UX52 265 aa21.98■■□□□ 1.11
RXRB-203ENST00000481441 FBXO33Q7Z6M2 555 aa21.97■■□□□ 1.11
RXRB-203ENST00000481441 FAM83AQ86UY5 434 aa21.97■■□□□ 1.11
RXRB-203ENST00000481441 NCBP3Q53F19 620 aaKnown RBP21.96■■□□□ 1.11
RXRB-203ENST00000481441 TEKT1Q969V4 418 aa21.96■■□□□ 1.11
RXRB-203ENST00000481441 RBM27Q9P2N5 1060 aaKnown RBP21.96■■□□□ 1.11
RXRB-203ENST00000481441 SRRDQ9UH36 339 aa21.96■■□□□ 1.11
RXRB-203ENST00000481441 IQSEC3Q9UPP2 1182 aaPredicted RBP21.96■■□□□ 1.11
RXRB-203ENST00000481441 RIPOR2Q9Y4F9 1068 aa21.96■■□□□ 1.11
RXRB-203ENST00000481441 ECM2O94769 699 aaPredicted RBP21.95■■□□□ 1.1
RXRB-203ENST00000481441 CHAF1AQ13111 956 aaPredicted RBP21.95■■□□□ 1.1
RXRB-203ENST00000481441 CCDC184Q52MB2 194 aa21.95■■□□□ 1.1
RXRB-203ENST00000481441 FKBP1CQ5VVH2 108 aa21.95■■□□□ 1.1
RXRB-203ENST00000481441 UBE2Q1Q7Z7E8 422 aa21.95■■□□□ 1.1
RXRB-203ENST00000481441 TBC1D22AQ8WUA7 517 aa21.95■■□□□ 1.1
RXRB-203ENST00000481441 DPF3Q92784 378 aa21.95■■□□□ 1.1
RXRB-203ENST00000481441 HOOK2Q96ED9 719 aa21.95■■□□□ 1.1
RXRB-203ENST00000481441 KAZALD1Q96I82 304 aa21.95■■□□□ 1.1
RXRB-203ENST00000481441 TRIM47Q96LD4 638 aa21.95■■□□□ 1.1
RXRB-203ENST00000481441 ZDHHC15Q96MV8 337 aa21.95■■□□□ 1.1
RXRB-203ENST00000481441 MRIQ9BWK5 157 aa21.95■■□□□ 1.1
RXRB-203ENST00000481441 C9orf78Q9NZ63 289 aaPredicted RBP21.95■■□□□ 1.1
RXRB-203ENST00000481441 CPA4Q9UI42 421 aa21.95■■□□□ 1.1
RXRB-203ENST00000481441 PSMC4P43686 418 aa21.94■■□□□ 1.1
RXRB-203ENST00000481441 PPATQ06203 517 aa21.94■■□□□ 1.1
RXRB-203ENST00000481441 EXOSC9Q06265 439 aaKnown RBP21.94■■□□□ 1.1
RXRB-203ENST00000481441 MROH5Q6ZUA9 1318 aa21.94■■□□□ 1.1
RXRB-203ENST00000481441 ADGRA2Q96PE1 1338 aa21.94■■□□□ 1.1
RXRB-203ENST00000481441 RPAP1Q9BWH6 1393 aaPredicted RBP21.93■■□□□ 1.1
RXRB-203ENST00000481441 OSBPP22059 807 aa21.93■■□□□ 1.1
RXRB-203ENST00000481441 DCAF15Q66K64 600 aa21.93■■□□□ 1.1
RXRB-203ENST00000481441 APOBEC3HQ6NTF7 200 aaKnown RBP21.93■■□□□ 1.1
RXRB-203ENST00000481441 ANKRD23Q86SG2 305 aa21.93■■□□□ 1.1
RXRB-203ENST00000481441 VPS37DQ86XT2 251 aa21.93■■□□□ 1.1
RXRB-203ENST00000481441 NKX2-3Q8TAU0 364 aa21.93■■□□□ 1.1
RXRB-203ENST00000481441 PRO3102Q9H379 93 aa21.93■■□□□ 1.1
RXRB-203ENST00000481441 TMOD2Q9NZR1 351 aa21.93■■□□□ 1.1
RXRB-203ENST00000481441 ALDH1L1O75891 902 aa21.92■■□□□ 1.1
RXRB-203ENST00000481441 GRK4P32298 578 aa21.92■■□□□ 1.1
RXRB-203ENST00000481441 GJA8P48165 433 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms