RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 TNS2Q63HR2 1409 aa9.05□□□□□ -0.96
LRCH3-216ENST00000481048 FAM208AQ9UK61 1670 aaKnown RBP9.04□□□□□ -0.96
LRCH3-216ENST00000481048 BACH1O14867 736 aa9.04□□□□□ -0.96
LRCH3-216ENST00000481048 FAM157BP0CG42 384 aa9.04□□□□□ -0.96
LRCH3-216ENST00000481048 MCM6Q14566 821 aa9.04□□□□□ -0.96
LRCH3-216ENST00000481048 TXNRD1Q16881 649 aa9.04□□□□□ -0.96
LRCH3-216ENST00000481048 EML3Q32P44 896 aa9.04□□□□□ -0.96
LRCH3-216ENST00000481048 ANKRD24Q8TF21 1146 aa9.04□□□□□ -0.96
LRCH3-216ENST00000481048 IP6K1Q92551 441 aa9.04□□□□□ -0.96
LRCH3-216ENST00000481048 TESK2Q96S53 571 aa9.04□□□□□ -0.96
LRCH3-216ENST00000481048 STK32BQ9NY57 414 aa9.04□□□□□ -0.96
LRCH3-216ENST00000481048 A0A1W2PP64 1363 aa9.03□□□□□ -0.96
LRCH3-216ENST00000481048 SKIP12755 728 aa9.03□□□□□ -0.96
LRCH3-216ENST00000481048 CHRNA4P43681 627 aa9.03□□□□□ -0.96
LRCH3-216ENST00000481048 SLC15A2Q16348 729 aa9.03□□□□□ -0.96
LRCH3-216ENST00000481048 ZNF468Q5VIY5 522 aaPredicted RBP9.03□□□□□ -0.96
LRCH3-216ENST00000481048 PTF1AQ7RTS3 328 aa9.03□□□□□ -0.96
LRCH3-216ENST00000481048 MARK1Q9P0L2 795 aa9.03□□□□□ -0.96
LRCH3-216ENST00000481048 NOD1Q9Y239 953 aa9.03□□□□□ -0.96
LRCH3-216ENST00000481048 CASZ1Q86V15 1759 aa9.03□□□□□ -0.96
LRCH3-216ENST00000481048 NHSQ6T4R5 1651 aa9.03□□□□□ -0.96
LRCH3-216ENST00000481048 CHD4Q14839 1912 aa9.02□□□□□ -0.97
LRCH3-216ENST00000481048 ST20-MTHFSA0A0A6YYL1 179 aa9.02□□□□□ -0.97
LRCH3-216ENST00000481048 TXLNAP40222 546 aa9.02□□□□□ -0.97
LRCH3-216ENST00000481048 GTF2IP78347 998 aa9.02□□□□□ -0.97
LRCH3-216ENST00000481048 SAMD5Q5TGI4 173 aa9.02□□□□□ -0.97
LRCH3-216ENST00000481048 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.02□□□□□ -0.97
LRCH3-216ENST00000481048 COG3Q96JB2 828 aa9.02□□□□□ -0.97
LRCH3-216ENST00000481048 SCHIP1Q9P0W5 487 aaPredicted RBP9.02□□□□□ -0.97
LRCH3-216ENST00000481048 BTAF1O14981 1849 aa9.02□□□□□ -0.97
LRCH3-216ENST00000481048 HMGB2P26583 209 aaKnown RBP9.01□□□□□ -0.97
LRCH3-216ENST00000481048 CDCA8Q53HL2 280 aa9.01□□□□□ -0.97
LRCH3-216ENST00000481048 ZNF358Q9NW07 568 aa9.01□□□□□ -0.97
LRCH3-216ENST00000481048 ANKRD36BQ8N2N9 1353 aa9□□□□□ -0.97
LRCH3-216ENST00000481048 EFSO43281 561 aa9□□□□□ -0.97
LRCH3-216ENST00000481048 TMF1P82094 1093 aa9□□□□□ -0.97
LRCH3-216ENST00000481048 ZDHHC1Q8WTX9 485 aa9□□□□□ -0.97
LRCH3-216ENST00000481048 MTFR1LQ9H019 292 aa9□□□□□ -0.97
LRCH3-216ENST00000481048 COG6Q9Y2V7 657 aa9□□□□□ -0.97
LRCH3-216ENST00000481048 CGNL1Q0VF96 1302 aa9□□□□□ -0.97
LRCH3-216ENST00000481048 LZTS3O60299 673 aaPredicted RBP8.99□□□□□ -0.97
LRCH3-216ENST00000481048 YY1P25490 414 aa8.99□□□□□ -0.97
LRCH3-216ENST00000481048 HOXC9P31274 260 aa8.99□□□□□ -0.97
LRCH3-216ENST00000481048 AMPHP49418 695 aa8.99□□□□□ -0.97
LRCH3-216ENST00000481048 TRIM26Q12899 539 aaPredicted RBP8.99□□□□□ -0.97
LRCH3-216ENST00000481048 LAMC2Q13753 1193 aa8.99□□□□□ -0.97
LRCH3-216ENST00000481048 NCOA4Q13772 614 aa8.99□□□□□ -0.97
LRCH3-216ENST00000481048 LRRC69Q6ZNQ3 347 aa8.99□□□□□ -0.97
LRCH3-216ENST00000481048 TRIM11Q96F44 468 aa8.99□□□□□ -0.97
LRCH3-216ENST00000481048 ACSBG1Q96GR2 724 aa8.99□□□□□ -0.97
LRCH3-216ENST00000481048 PLVAPQ9BX97 442 aa8.99□□□□□ -0.97
LRCH3-216ENST00000481048 ALG2Q9H553 416 aa8.99□□□□□ -0.97
LRCH3-216ENST00000481048 TIMELESSQ9UNS1 1208 aa8.99□□□□□ -0.97
LRCH3-216ENST00000481048 QSER1Q2KHR3 1735 aa8.99□□□□□ -0.97
LRCH3-216ENST00000481048 MAP3K19Q56UN5 1328 aa8.99□□□□□ -0.97
LRCH3-216ENST00000481048 FYB1O15117 783 aa8.98□□□□□ -0.97
LRCH3-216ENST00000481048 ZBTB7AO95365 584 aa8.98□□□□□ -0.97
LRCH3-216ENST00000481048 NOS2P35228 1153 aa8.98□□□□□ -0.97
LRCH3-216ENST00000481048 TEAD4Q15561 434 aa8.98□□□□□ -0.97
LRCH3-216ENST00000481048 PDGFDQ9GZP0 370 aaPredicted RBP8.98□□□□□ -0.97
LRCH3-216ENST00000481048 NEUROD4Q9HD90 331 aa8.98□□□□□ -0.97
LRCH3-216ENST00000481048 ZNF232Q9UNY5 417 aa8.98□□□□□ -0.97
LRCH3-216ENST00000481048 RGPD2P0DJD1 1756 aa8.98□□□□□ -0.97
LRCH3-216ENST00000481048 RTL1A6NKG5 1358 aa8.98□□□□□ -0.97
LRCH3-216ENST00000481048 KIF24Q5T7B8 1368 aa8.98□□□□□ -0.97
LRCH3-216ENST00000481048 ELOA3CA0A087WX78 387 aaPredicted RBP8.97□□□□□ -0.97
LRCH3-216ENST00000481048 ELOA3DA6NLF2 546 aaPredicted RBP8.97□□□□□ -0.97
LRCH3-216ENST00000481048 ALAS2P22557 587 aa8.97□□□□□ -0.97
LRCH3-216ENST00000481048 ELOA3BQ3SY89 546 aa8.97□□□□□ -0.97
LRCH3-216ENST00000481048 TBCELQ5QJ74 424 aa8.97□□□□□ -0.97
LRCH3-216ENST00000481048 SYT9Q86SS6 491 aa8.97□□□□□ -0.97
LRCH3-216ENST00000481048 SLC9A9Q8IVB4 645 aa8.97□□□□□ -0.97
LRCH3-216ENST00000481048 TNS4Q8IZW8 715 aa8.97□□□□□ -0.97
LRCH3-216ENST00000481048 DEPDC4Q8N2C3 294 aa8.97□□□□□ -0.97
LRCH3-216ENST00000481048 NFATC2IPQ8NCF5 419 aa8.97□□□□□ -0.97
LRCH3-216ENST00000481048 ELOA3Q8NG57 546 aa8.97□□□□□ -0.97
LRCH3-216ENST00000481048 ZCRB1Q8TBF4 217 aaKnown RBP8.97□□□□□ -0.97
LRCH3-216ENST00000481048 DDX54Q8TDD1 881 aaKnown RBP8.97□□□□□ -0.97
LRCH3-216ENST00000481048 SYT17Q9BSW7 474 aa8.97□□□□□ -0.97
LRCH3-216ENST00000481048 PAPPAQ13219 1627 aa8.96□□□□□ -0.98
LRCH3-216ENST00000481048 DOC2BQ14184 412 aa8.96□□□□□ -0.98
LRCH3-216ENST00000481048 Q8N3U1 123 aa8.96□□□□□ -0.98
LRCH3-216ENST00000481048 LTV1Q96GA3 475 aaPredicted RBP8.96□□□□□ -0.98
LRCH3-216ENST00000481048 LY75O60449 1722 aa8.96□□□□□ -0.98
LRCH3-216ENST00000481048 MAP2P11137 1827 aaKnown RBP8.96□□□□□ -0.98
LRCH3-216ENST00000481048 MYOM1P52179 1685 aa8.95□□□□□ -0.98
LRCH3-216ENST00000481048 COL24A1Q17RW2 1714 aa8.95□□□□□ -0.98
LRCH3-216ENST00000481048 EML1O00423 815 aa8.95□□□□□ -0.98
LRCH3-216ENST00000481048 EPHA4P54764 986 aa8.95□□□□□ -0.98
LRCH3-216ENST00000481048 WWC1Q8IX03 1113 aa8.95□□□□□ -0.98
LRCH3-216ENST00000481048 ARXQ96QS3 562 aa8.95□□□□□ -0.98
LRCH3-216ENST00000481048 KIF20BQ96Q89 1820 aa8.95□□□□□ -0.98
LRCH3-216ENST00000481048 CLSPNQ9HAW4 1339 aa8.95□□□□□ -0.98
LRCH3-216ENST00000481048 USP47Q96K76 1375 aa8.95□□□□□ -0.98
LRCH3-216ENST00000481048 MAP3K5Q99683 1374 aa8.95□□□□□ -0.98
LRCH3-216ENST00000481048 SMG6Q86US8 1419 aaKnown RBP8.95□□□□□ -0.98
LRCH3-216ENST00000481048 SHANK3Q9BYB0 1731 aa8.94□□□□□ -0.98
LRCH3-216ENST00000481048 USP17L5A8MUK1 530 aa8.94□□□□□ -0.98
LRCH3-216ENST00000481048 SPATA31C1P0DKV0 1188 aa8.94□□□□□ -0.98
LRCH3-216ENST00000481048 RAPGEF4Q8WZA2 1011 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms