RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 ZNF512BQ96KM6 892 aaPredicted RBP18.51■□□□□ 0.55
ABCF3-213ENST00000480539 SERPINA10Q9UK55 444 aa18.51■□□□□ 0.55
ABCF3-213ENST00000480539 SUGT1Q9Y2Z0 365 aa18.51■□□□□ 0.55
ABCF3-213ENST00000480539 AOX1Q06278 1338 aa18.5■□□□□ 0.55
ABCF3-213ENST00000480539 SPDYE2BA6NHP3 402 aa18.5■□□□□ 0.55
ABCF3-213ENST00000480539 SPDYE6P0CI01 402 aa18.5■□□□□ 0.55
ABCF3-213ENST00000480539 DIXDC1Q155Q3 683 aa18.5■□□□□ 0.55
ABCF3-213ENST00000480539 ANKRD45Q5TZF3 282 aa18.5■□□□□ 0.55
ABCF3-213ENST00000480539 ANGEL2Q5VTE6 544 aaKnown RBP18.5■□□□□ 0.55
ABCF3-213ENST00000480539 TSHZ3Q63HK5 1081 aa18.5■□□□□ 0.55
ABCF3-213ENST00000480539 DZIP1Q86YF9 867 aaKnown RBP18.5■□□□□ 0.55
ABCF3-213ENST00000480539 ZBED3Q96IU2 234 aaPredicted RBP18.5■□□□□ 0.55
ABCF3-213ENST00000480539 ZBTB47Q9UFB7 747 aaPredicted RBP18.5■□□□□ 0.55
ABCF3-213ENST00000480539 ECM29Q5VYK3 1845 aa18.5■□□□□ 0.55
ABCF3-213ENST00000480539 CYP2E1P05181 493 aaPredicted RBP18.49■□□□□ 0.55
ABCF3-213ENST00000480539 NEFLP07196 543 aa18.49■□□□□ 0.55
ABCF3-213ENST00000480539 MMP14P50281 582 aa18.49■□□□□ 0.55
ABCF3-213ENST00000480539 B4GALNT3Q6L9W6 998 aa18.49■□□□□ 0.55
ABCF3-213ENST00000480539 SMC5Q8IY18 1101 aa18.49■□□□□ 0.55
ABCF3-213ENST00000480539 CNTROBQ8N137 903 aa18.49■□□□□ 0.55
ABCF3-213ENST00000480539 OTUD7AQ8TE49 926 aaPredicted RBP18.49■□□□□ 0.55
ABCF3-213ENST00000480539 ZC3H15Q8WU90 426 aaKnown RBP18.49■□□□□ 0.55
ABCF3-213ENST00000480539 TEKT1Q969V4 418 aa18.49■□□□□ 0.55
ABCF3-213ENST00000480539 GLIS2Q9BZE0 524 aaPredicted RBP18.49■□□□□ 0.55
ABCF3-213ENST00000480539 SCAF8Q9UPN6 1271 aaKnown RBP18.49■□□□□ 0.55
ABCF3-213ENST00000480539 CLRN2A0PK11 232 aa18.48■□□□□ 0.55
ABCF3-213ENST00000480539 ADM5C9JUS6 153 aa18.48■□□□□ 0.55
ABCF3-213ENST00000480539 MTMR14Q8NCE2 650 aa18.48■□□□□ 0.55
ABCF3-213ENST00000480539 DCPSQ96C86 337 aaKnown RBP18.48■□□□□ 0.55
ABCF3-213ENST00000480539 DNAJC2Q99543 621 aaKnown RBP18.48■□□□□ 0.55
ABCF3-213ENST00000480539 PIH1D3Q9NQM4 214 aaKnown RBP18.48■□□□□ 0.55
ABCF3-213ENST00000480539 RAI14Q9P0K7 980 aa18.48■□□□□ 0.55
ABCF3-213ENST00000480539 PGAP2Q9UHJ9 254 aa18.48■□□□□ 0.55
ABCF3-213ENST00000480539 TRAF5O00463 557 aa18.47■□□□□ 0.55
ABCF3-213ENST00000480539 MECOMQ03112 1051 aa18.47■□□□□ 0.55
ABCF3-213ENST00000480539 FMR1Q06787 632 aaKnown RBP eCLIP18.47■□□□□ 0.55
ABCF3-213ENST00000480539 SPTY2D1Q68D10 685 aaPredicted RBP18.47■□□□□ 0.55
ABCF3-213ENST00000480539 ERICH6Q7L0X2 663 aa18.47■□□□□ 0.55
ABCF3-213ENST00000480539 KRT26Q7Z3Y9 468 aa18.47■□□□□ 0.55
ABCF3-213ENST00000480539 GPATCH3Q96I76 525 aa18.47■□□□□ 0.55
ABCF3-213ENST00000480539 PRMT6Q96LA8 375 aaPredicted RBP18.47■□□□□ 0.55
ABCF3-213ENST00000480539 BOLA2Q9H3K6 86 aa18.47■□□□□ 0.55
ABCF3-213ENST00000480539 ANTXR1Q9H6X2 564 aa18.47■□□□□ 0.55
ABCF3-213ENST00000480539 LRP2BPQ9P2M1 347 aa18.47■□□□□ 0.55
ABCF3-213ENST00000480539 DAGLAQ9Y4D2 1042 aa18.47■□□□□ 0.55
ABCF3-213ENST00000480539 DOCK2Q92608 1830 aa18.46■□□□□ 0.55
ABCF3-213ENST00000480539 HDLBPQ00341 1268 aaKnown RBP18.46■□□□□ 0.55
ABCF3-213ENST00000480539 DLK2Q6UY11 383 aa18.46■□□□□ 0.55
ABCF3-213ENST00000480539 USP48Q86UV5 1035 aa18.46■□□□□ 0.55
ABCF3-213ENST00000480539 ZNF384Q8TF68 577 aa18.46■□□□□ 0.55
ABCF3-213ENST00000480539 LNPKQ9C0E8 428 aa18.46■□□□□ 0.55
ABCF3-213ENST00000480539 VEZTQ9HBM0 779 aa18.46■□□□□ 0.55
ABCF3-213ENST00000480539 PITPNM2Q9BZ72 1349 aa18.46■□□□□ 0.55
ABCF3-213ENST00000480539 MYO5AQ9Y4I1 1855 aaKnown RBP18.46■□□□□ 0.54
ABCF3-213ENST00000480539 GOLIM4O00461 696 aa18.45■□□□□ 0.54
ABCF3-213ENST00000480539 MYO1BO43795 1136 aa18.45■□□□□ 0.54
ABCF3-213ENST00000480539 ITGBL1O95965 494 aaPredicted RBP18.45■□□□□ 0.54
ABCF3-213ENST00000480539 ATP5JP18859 108 aa18.45■□□□□ 0.54
ABCF3-213ENST00000480539 SULF1Q8IWU6 871 aa18.45■□□□□ 0.54
ABCF3-213ENST00000480539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.45■□□□□ 0.54
ABCF3-213ENST00000480539 EDC3Q96F86 508 aaKnown RBP18.45■□□□□ 0.54
ABCF3-213ENST00000480539 ZDHHC15Q96MV8 337 aa18.45■□□□□ 0.54
ABCF3-213ENST00000480539 TDRD3Q9H7E2 651 aaKnown RBP18.45■□□□□ 0.54
ABCF3-213ENST00000480539 ECHDC1Q9NTX5 307 aa18.45■□□□□ 0.54
ABCF3-213ENST00000480539 PASKQ96RG2 1323 aa18.45■□□□□ 0.54
ABCF3-213ENST00000480539 MYH2Q9UKX2 1941 aa18.45■□□□□ 0.54
ABCF3-213ENST00000480539 IDH1O75874 414 aaKnown RBP18.44■□□□□ 0.54
ABCF3-213ENST00000480539 MX1P20591 662 aa18.44■□□□□ 0.54
ABCF3-213ENST00000480539 HHIPL2Q6UWX4 724 aa18.44■□□□□ 0.54
ABCF3-213ENST00000480539 CDC37L1Q7L3B6 337 aa18.44■□□□□ 0.54
ABCF3-213ENST00000480539 NSUN4Q96CB9 384 aaKnown RBP18.44■□□□□ 0.54
ABCF3-213ENST00000480539 MROH7-TTC4A0A0A0MT08 1334 aa18.44■□□□□ 0.54
ABCF3-213ENST00000480539 SALL3Q9BXA9 1300 aa18.44■□□□□ 0.54
ABCF3-213ENST00000480539 CACNB3P54284 484 aa18.43■□□□□ 0.54
ABCF3-213ENST00000480539 NUCB1Q02818 461 aa18.43■□□□□ 0.54
ABCF3-213ENST00000480539 SPDYE2Q495Y8 402 aa18.43■□□□□ 0.54
ABCF3-213ENST00000480539 APOBEC3HQ6NTF7 200 aaKnown RBP18.43■□□□□ 0.54
ABCF3-213ENST00000480539 CHD1LQ86WJ1 897 aa18.43■□□□□ 0.54
ABCF3-213ENST00000480539 APOBEC3FQ8IUX4 373 aaKnown RBP18.43■□□□□ 0.54
ABCF3-213ENST00000480539 HAUS7Q99871 368 aa18.43■□□□□ 0.54
ABCF3-213ENST00000480539 ZNF408Q9H9D4 720 aa18.43■□□□□ 0.54
ABCF3-213ENST00000480539 ZNF70Q9UC06 446 aaPredicted RBP18.43■□□□□ 0.54
ABCF3-213ENST00000480539 GAKO14976 1311 aa18.43■□□□□ 0.54
ABCF3-213ENST00000480539 BTDP43251 543 aa18.42■□□□□ 0.54
ABCF3-213ENST00000480539 MRIQ9BWK5 157 aa18.42■□□□□ 0.54
ABCF3-213ENST00000480539 PAG1Q9NWQ8 432 aa18.42■□□□□ 0.54
ABCF3-213ENST00000480539 TTC41PQ6P2S7 1318 aa18.42■□□□□ 0.54
ABCF3-213ENST00000480539 GSTO1P78417 241 aa18.41■□□□□ 0.54
ABCF3-213ENST00000480539 NAA16Q6N069 864 aaPredicted RBP18.41■□□□□ 0.54
ABCF3-213ENST00000480539 SLF2Q8IX21 1173 aa18.41■□□□□ 0.54
ABCF3-213ENST00000480539 PI4K2BQ8TCG2 481 aa18.41■□□□□ 0.54
ABCF3-213ENST00000480539 CDCA5Q96FF9 252 aa18.41■□□□□ 0.54
ABCF3-213ENST00000480539 TRPM7Q96QT4 1865 aa18.4■□□□□ 0.54
ABCF3-213ENST00000480539 TCP10L2B9ZVM9 353 aa18.4■□□□□ 0.54
ABCF3-213ENST00000480539 MAP4K4O95819 1239 aaPredicted RBP18.4■□□□□ 0.54
ABCF3-213ENST00000480539 HSPA6P17066 643 aa18.4■□□□□ 0.54
ABCF3-213ENST00000480539 APLP1P51693 650 aa18.4■□□□□ 0.54
ABCF3-213ENST00000480539 TTF1Q15361 905 aaPredicted RBP18.4■□□□□ 0.54
ABCF3-213ENST00000480539 PRAMEF18Q5VWM3 479 aa18.4■□□□□ 0.54
ABCF3-213ENST00000480539 TMOD2Q9NZR1 351 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms