RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 DLK2Q6UY11 383 aa14.82□□□□□ -0.04
CCM2-212ENST00000480382 CDC37L1Q7L3B6 337 aa14.82□□□□□ -0.04
CCM2-212ENST00000480382 KRT26Q7Z3Y9 468 aa14.82□□□□□ -0.04
CCM2-212ENST00000480382 USP48Q86UV5 1035 aa14.82□□□□□ -0.04
CCM2-212ENST00000480382 MTMR14Q8NCE2 650 aa14.82□□□□□ -0.04
CCM2-212ENST00000480382 HMG20BQ9P0W2 317 aa14.82□□□□□ -0.04
CCM2-212ENST00000480382 SERPINA10Q9UK55 444 aa14.82□□□□□ -0.04
CCM2-212ENST00000480382 SCAF8Q9UPN6 1271 aaKnown RBP14.82□□□□□ -0.04
CCM2-212ENST00000480382 MAST3O60307 1309 aa14.82□□□□□ -0.04
CCM2-212ENST00000480382 AOX1Q06278 1338 aa14.82□□□□□ -0.04
CCM2-212ENST00000480382 PITPNM2Q9BZ72 1349 aa14.82□□□□□ -0.04
CCM2-212ENST00000480382 DOCK2Q92608 1830 aa14.81□□□□□ -0.04
CCM2-212ENST00000480382 SPDYE2BA6NHP3 402 aa14.81□□□□□ -0.04
CCM2-212ENST00000480382 UQCRFS1P1P0C7P4 283 aa14.81□□□□□ -0.04
CCM2-212ENST00000480382 SPDYE6P0CI01 402 aa14.81□□□□□ -0.04
CCM2-212ENST00000480382 CLASRPQ8N2M8 674 aaKnown RBP14.81□□□□□ -0.04
CCM2-212ENST00000480382 SPATA5Q8NB90 893 aa14.81□□□□□ -0.04
CCM2-212ENST00000480382 SUGT1Q9Y2Z0 365 aa14.81□□□□□ -0.04
CCM2-212ENST00000480382 SMARCA5O60264 1052 aaPredicted RBP14.8□□□□□ -0.04
CCM2-212ENST00000480382 LDHBP07195 334 aaKnown RBP14.8□□□□□ -0.04
CCM2-212ENST00000480382 SULF1Q8IWU6 871 aa14.8□□□□□ -0.04
CCM2-212ENST00000480382 TEKT1Q969V4 418 aa14.8□□□□□ -0.04
CCM2-212ENST00000480382 PRMT6Q96LA8 375 aaPredicted RBP14.8□□□□□ -0.04
CCM2-212ENST00000480382 LRRCC1Q9C099 1032 aa14.8□□□□□ -0.04
CCM2-212ENST00000480382 DCTPP1Q9H773 170 aa14.8□□□□□ -0.04
CCM2-212ENST00000480382 ZNF408Q9H9D4 720 aa14.8□□□□□ -0.04
CCM2-212ENST00000480382 ABCF2Q9UG63 623 aa14.8□□□□□ -0.04
CCM2-212ENST00000480382 CLRN2A0PK11 232 aa14.79□□□□□ -0.04
CCM2-212ENST00000480382 ZGPATQ8N5A5 531 aaKnown RBP14.79□□□□□ -0.04
CCM2-212ENST00000480382 SNRKQ9NRH2 765 aa14.79□□□□□ -0.04
CCM2-212ENST00000480382 CREBZFQ9NS37 354 aa14.79□□□□□ -0.04
CCM2-212ENST00000480382 TMEM88BA6NKF7 163 aa14.78□□□□□ -0.04
CCM2-212ENST00000480382 MYO1BO43795 1136 aa14.78□□□□□ -0.04
CCM2-212ENST00000480382 CELF2O95319 508 aaKnown RBP14.78□□□□□ -0.04
CCM2-212ENST00000480382 IFIT2P09913 472 aaKnown RBP14.78□□□□□ -0.04
CCM2-212ENST00000480382 HDLBPQ00341 1268 aaKnown RBP14.78□□□□□ -0.04
CCM2-212ENST00000480382 AAMPQ13685 434 aa14.78□□□□□ -0.04
CCM2-212ENST00000480382 DIXDC1Q155Q3 683 aa14.78□□□□□ -0.04
CCM2-212ENST00000480382 TBC1D9Q6ZT07 1266 aa14.78□□□□□ -0.04
CCM2-212ENST00000480382 DZIP1Q86YF9 867 aaKnown RBP14.78□□□□□ -0.04
CCM2-212ENST00000480382 APOBEC3FQ8IUX4 373 aaKnown RBP14.78□□□□□ -0.04
CCM2-212ENST00000480382 CDCA5Q96FF9 252 aa14.78□□□□□ -0.04
CCM2-212ENST00000480382 ZNF512BQ96KM6 892 aaPredicted RBP14.78□□□□□ -0.04
CCM2-212ENST00000480382 TDRD3Q9H7E2 651 aaKnown RBP14.78□□□□□ -0.04
CCM2-212ENST00000480382 VEZTQ9HBM0 779 aa14.78□□□□□ -0.04
CCM2-212ENST00000480382 ZAP70P43403 619 aa14.77□□□□□ -0.05
CCM2-212ENST00000480382 CST9Q5W186 159 aa14.77□□□□□ -0.05
CCM2-212ENST00000480382 ZDHHC15Q96MV8 337 aa14.77□□□□□ -0.05
CCM2-212ENST00000480382 NDUFB9Q9Y6M9 179 aa14.77□□□□□ -0.05
CCM2-212ENST00000480382 PAPPA2Q9BXP8 1791 aa14.76□□□□□ -0.05
CCM2-212ENST00000480382 CYP2E1P05181 493 aaPredicted RBP14.76□□□□□ -0.05
CCM2-212ENST00000480382 HDAC1Q13547 482 aaPredicted RBP14.76□□□□□ -0.05
CCM2-212ENST00000480382 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
CCM2-212ENST00000480382 PRAMEF18Q5VWM3 479 aa14.76□□□□□ -0.05
CCM2-212ENST00000480382 SPTY2D1Q68D10 685 aaPredicted RBP14.76□□□□□ -0.05
CCM2-212ENST00000480382 HHIPL2Q6UWX4 724 aa14.76□□□□□ -0.05
CCM2-212ENST00000480382 ERICH6Q7L0X2 663 aa14.76□□□□□ -0.05
CCM2-212ENST00000480382 ZNF70Q9UC06 446 aaPredicted RBP14.76□□□□□ -0.05
CCM2-212ENST00000480382 DAGLAQ9Y4D2 1042 aa14.76□□□□□ -0.05
CCM2-212ENST00000480382 MECOMQ03112 1051 aa14.75□□□□□ -0.05
CCM2-212ENST00000480382 APOBEC3HQ6NTF7 200 aaKnown RBP14.75□□□□□ -0.05
CCM2-212ENST00000480382 ZNF384Q8TF68 577 aa14.75□□□□□ -0.05
CCM2-212ENST00000480382 MRIQ9BWK5 157 aa14.75□□□□□ -0.05
CCM2-212ENST00000480382 RAI14Q9P0K7 980 aa14.75□□□□□ -0.05
CCM2-212ENST00000480382 ABT1Q9ULW3 272 aaKnown RBP14.75□□□□□ -0.05
CCM2-212ENST00000480382 MYH7P12883 1935 aa14.74□□□□□ -0.05
CCM2-212ENST00000480382 MROH7-TTC4A0A0A0MT08 1334 aa14.74□□□□□ -0.05
CCM2-212ENST00000480382 GAKO14976 1311 aa14.74□□□□□ -0.05
CCM2-212ENST00000480382 SSC5DA1L4H1 1573 aa14.74□□□□□ -0.05
CCM2-212ENST00000480382 CACNB3P54284 484 aa14.74□□□□□ -0.05
CCM2-212ENST00000480382 NSUN4Q96CB9 384 aaKnown RBP14.74□□□□□ -0.05
CCM2-212ENST00000480382 DEFB129Q9H1M3 183 aa14.74□□□□□ -0.05
CCM2-212ENST00000480382 PIH1D3Q9NQM4 214 aaKnown RBP14.74□□□□□ -0.05
CCM2-212ENST00000480382 LRP2BPQ9P2M1 347 aa14.74□□□□□ -0.05
CCM2-212ENST00000480382 CDK5RAP2Q96SN8 1893 aa14.74□□□□□ -0.05
CCM2-212ENST00000480382 OTOFQ9HC10 1997 aa14.73□□□□□ -0.05
CCM2-212ENST00000480382 TCP10L2B9ZVM9 353 aa14.73□□□□□ -0.05
CCM2-212ENST00000480382 DNAJC2Q99543 621 aaKnown RBP14.73□□□□□ -0.05
CCM2-212ENST00000480382 ANTXR1Q9H6X2 564 aa14.73□□□□□ -0.05
CCM2-212ENST00000480382 GBA2Q9HCG7 927 aaPredicted RBP14.73□□□□□ -0.05
CCM2-212ENST00000480382 MKRN1Q9UHC7 482 aaKnown RBP14.73□□□□□ -0.05
CCM2-212ENST00000480382 TLL2Q9Y6L7 1015 aa14.73□□□□□ -0.05
CCM2-212ENST00000480382 CNTNAP1P78357 1384 aa14.73□□□□□ -0.05
CCM2-212ENST00000480382 FOCADQ5VW36 1801 aa14.72□□□□□ -0.05
CCM2-212ENST00000480382 BTDP43251 543 aa14.72□□□□□ -0.05
CCM2-212ENST00000480382 TNFAIP1Q13829 316 aa14.72□□□□□ -0.05
CCM2-212ENST00000480382 CDC42EP5Q6NZY7 148 aa14.72□□□□□ -0.05
CCM2-212ENST00000480382 SLF2Q8IX21 1173 aa14.72□□□□□ -0.05
CCM2-212ENST00000480382 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.72□□□□□ -0.05
CCM2-212ENST00000480382 GCC1Q96CN9 775 aa14.72□□□□□ -0.05
CCM2-212ENST00000480382 RWDD1Q9H446 243 aaPredicted RBP14.72□□□□□ -0.05
CCM2-212ENST00000480382 TMOD2Q9NZR1 351 aa14.72□□□□□ -0.05
CCM2-212ENST00000480382 PPP2R3BQ9Y5P8 575 aa14.72□□□□□ -0.05
CCM2-212ENST00000480382 PCNTO95613 3336 aa14.71□□□□□ -0.05
CCM2-212ENST00000480382 THSD7BQ9C0I4 1608 aa14.71□□□□□ -0.05
CCM2-212ENST00000480382 AK9Q5TCS8 1911 aa14.71□□□□□ -0.05
CCM2-212ENST00000480382 IGHDP01880 384 aa14.71□□□□□ -0.05
CCM2-212ENST00000480382 GSTO1P78417 241 aa14.71□□□□□ -0.05
CCM2-212ENST00000480382 RASA3Q14644 834 aa14.71□□□□□ -0.05
CCM2-212ENST00000480382 TSHZ3Q63HK5 1081 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms