RNA–Protein interactions for RNA: ENST00000479859.1

UBXN2A-204, Transcript of UBX domain protein 2A, humanhuman

TSL 2

Gene UBXN2A, Length 403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-204ENST00000479859 NID1P14543 1247 aa9.85□□□□□ -0.83
UBXN2A-204ENST00000479859 DNAJA1P31689 397 aaKnown RBP9.85□□□□□ -0.83
UBXN2A-204ENST00000479859 GBP2P32456 591 aaPredicted RBP9.85□□□□□ -0.83
UBXN2A-204ENST00000479859 TTBK2Q6IQ55 1244 aa9.85□□□□□ -0.83
UBXN2A-204ENST00000479859 SPATA32Q96LK8 384 aa9.85□□□□□ -0.83
UBXN2A-204ENST00000479859 TMEM74Q96NL1 305 aa9.85□□□□□ -0.83
UBXN2A-204ENST00000479859 SOX17Q9H6I2 414 aaPredicted RBP9.85□□□□□ -0.83
UBXN2A-204ENST00000479859 SAMM50Q9Y512 469 aa9.85□□□□□ -0.83
UBXN2A-204ENST00000479859 NME2P22392 152 aa9.84□□□□□ -0.83
UBXN2A-204ENST00000479859 GJA8P48165 433 aa9.84□□□□□ -0.83
UBXN2A-204ENST00000479859 DGKGP49619 791 aa9.84□□□□□ -0.83
UBXN2A-204ENST00000479859 PIP4K2BP78356 416 aa9.84□□□□□ -0.83
UBXN2A-204ENST00000479859 COL9A3Q14050 684 aaPredicted RBP9.84□□□□□ -0.83
UBXN2A-204ENST00000479859 SOGA3Q5TF21 947 aa9.84□□□□□ -0.83
UBXN2A-204ENST00000479859 PCNX4Q63HM2 1172 aa9.84□□□□□ -0.83
UBXN2A-204ENST00000479859 HGSNATQ68CP4 663 aa9.84□□□□□ -0.83
UBXN2A-204ENST00000479859 SVOPQ8N4V2 548 aa9.84□□□□□ -0.83
UBXN2A-204ENST00000479859 NEDD1Q8NHV4 660 aa9.84□□□□□ -0.83
UBXN2A-204ENST00000479859 DDX54Q8TDD1 881 aaKnown RBP9.84□□□□□ -0.83
UBXN2A-204ENST00000479859 SLC7A3Q8WY07 619 aa9.84□□□□□ -0.83
UBXN2A-204ENST00000479859 WNT8BQ93098 351 aa9.84□□□□□ -0.83
UBXN2A-204ENST00000479859 ENAMQ9NRM1 1142 aa9.84□□□□□ -0.83
UBXN2A-204ENST00000479859 MINDY4BA8MYZ0 360 aa9.83□□□□□ -0.84
UBXN2A-204ENST00000479859 HOXB4P17483 251 aaPredicted RBP9.83□□□□□ -0.84
UBXN2A-204ENST00000479859 ARL4DP49703 201 aa9.83□□□□□ -0.84
UBXN2A-204ENST00000479859 SULF2Q8IWU5 870 aa9.83□□□□□ -0.84
UBXN2A-204ENST00000479859 PHC3Q8NDX5 983 aa9.83□□□□□ -0.84
UBXN2A-204ENST00000479859 RRAGCQ9HB90 399 aa9.83□□□□□ -0.84
UBXN2A-204ENST00000479859 FSCN2O14926 492 aa9.82□□□□□ -0.84
UBXN2A-204ENST00000479859 BMP6P22004 513 aa9.82□□□□□ -0.84
UBXN2A-204ENST00000479859 CANXP27824 592 aaKnown RBP9.82□□□□□ -0.84
UBXN2A-204ENST00000479859 RPS26P62854 115 aaKnown RBP9.82□□□□□ -0.84
UBXN2A-204ENST00000479859 C19orf57Q0VDD7 668 aa9.82□□□□□ -0.84
UBXN2A-204ENST00000479859 AGMOQ6ZNB7 445 aa9.82□□□□□ -0.84
UBXN2A-204ENST00000479859 ILDR2Q71H61 639 aa9.82□□□□□ -0.84
UBXN2A-204ENST00000479859 DMRTC2Q8IXT2 367 aaPredicted RBP9.82□□□□□ -0.84
UBXN2A-204ENST00000479859 RHOVQ96L33 236 aa9.82□□□□□ -0.84
UBXN2A-204ENST00000479859 OSGEPQ9NPF4 335 aa9.82□□□□□ -0.84
UBXN2A-204ENST00000479859 TLR6Q9Y2C9 796 aa9.82□□□□□ -0.84
UBXN2A-204ENST00000479859 GTF2F1P35269 517 aaKnown RBP eCLIP9.81□□□□□ -0.84
UBXN2A-204ENST00000479859 GSTM4Q03013 218 aa9.81□□□□□ -0.84
UBXN2A-204ENST00000479859 PAK2Q13177 524 aa9.81□□□□□ -0.84
UBXN2A-204ENST00000479859 RASGRP4Q8TDF6 673 aa9.81□□□□□ -0.84
UBXN2A-204ENST00000479859 STK35Q8TDR2 534 aa9.81□□□□□ -0.84
UBXN2A-204ENST00000479859 GPRASP2Q96D09 838 aa9.81□□□□□ -0.84
UBXN2A-204ENST00000479859 EIF4EBP3O60516 100 aaPredicted RBP9.8□□□□□ -0.84
UBXN2A-204ENST00000479859 ARNTP27540 789 aa9.8□□□□□ -0.84
UBXN2A-204ENST00000479859 EIF4A3P38919 411 aaKnown RBP9.8□□□□□ -0.84
UBXN2A-204ENST00000479859 RBL2Q08999 1139 aa9.8□□□□□ -0.84
UBXN2A-204ENST00000479859 AP3B2Q13367 1082 aa9.8□□□□□ -0.84
UBXN2A-204ENST00000479859 SPON2Q9BUD6 331 aa9.8□□□□□ -0.84
UBXN2A-204ENST00000479859 HIRIP3Q9BW71 556 aaPredicted RBP9.8□□□□□ -0.84
UBXN2A-204ENST00000479859 CARD10Q9BWT7 1032 aa9.8□□□□□ -0.84
UBXN2A-204ENST00000479859 EMILIN2Q9BXX0 1053 aa9.8□□□□□ -0.84
UBXN2A-204ENST00000479859 ADAMTS1Q9UHI8 967 aa9.8□□□□□ -0.84
UBXN2A-204ENST00000479859 CYP8B1Q9UNU6 501 aa9.8□□□□□ -0.84
UBXN2A-204ENST00000479859 WIPF1O43516 503 aa9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 ARHGEF15O94989 841 aa9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 PF4P02776 101 aa9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 ATF4P18848 351 aaPredicted RBP9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 TFE3P19532 575 aaPredicted RBP9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 LMNB2Q03252 620 aa9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 CAMK2GQ13555 558 aaPredicted RBP9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 SETDB1Q15047 1291 aa9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 LRRC14Q15048 493 aa9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 TRAPPC3LQ5T215 181 aa9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 RASIP1Q5U651 963 aa9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 KIAA0825Q8IV33 1275 aa9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 MAP4K3Q8IVH8 894 aa9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 KLHL23Q8NBE8 558 aa9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 SEC16BQ96JE7 1060 aa9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 CBX8Q9HC52 389 aa9.79□□□□□ -0.84
UBXN2A-204ENST00000479859 LMNB1P20700 586 aa9.78□□□□□ -0.84
UBXN2A-204ENST00000479859 FAM160A1Q05DH4 1040 aa9.78□□□□□ -0.84
UBXN2A-204ENST00000479859 DPH6Q7L8W6 267 aa9.78□□□□□ -0.84
UBXN2A-204ENST00000479859 DHX38Q92620 1227 aaKnown RBP9.78□□□□□ -0.84
UBXN2A-204ENST00000479859 KLHDC7BQ96G42 594 aa9.78□□□□□ -0.84
UBXN2A-204ENST00000479859 KCNQ5Q9NR82 932 aa9.78□□□□□ -0.84
UBXN2A-204ENST00000479859 TM4SF5O14894 197 aa9.77□□□□□ -0.85
UBXN2A-204ENST00000479859 CYP11A1P05108 521 aa9.77□□□□□ -0.85
UBXN2A-204ENST00000479859 GARTP22102 1010 aa9.77□□□□□ -0.85
UBXN2A-204ENST00000479859 ZNF252P-AS1Q0IIN9 211 aa9.77□□□□□ -0.85
UBXN2A-204ENST00000479859 SNAP47Q5SQN1 464 aa9.77□□□□□ -0.85
UBXN2A-204ENST00000479859 LLGL2Q6P1M3 1020 aa9.77□□□□□ -0.85
UBXN2A-204ENST00000479859 PDZD3Q86UT5 571 aa9.77□□□□□ -0.85
UBXN2A-204ENST00000479859 DTWD1Q8N5C7 304 aa9.77□□□□□ -0.85
UBXN2A-204ENST00000479859 GALNT11Q8NCW6 608 aa9.77□□□□□ -0.85
UBXN2A-204ENST00000479859 GRIN3AQ8TCU5 1115 aa9.77□□□□□ -0.85
UBXN2A-204ENST00000479859 ZNF296Q8WUU4 475 aaPredicted RBP9.77□□□□□ -0.85
UBXN2A-204ENST00000479859 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.77□□□□□ -0.85
UBXN2A-204ENST00000479859 PCDHB5Q9Y5E4 795 aa9.77□□□□□ -0.85
UBXN2A-204ENST00000479859 STK10O94804 968 aaKnown RBP9.76□□□□□ -0.85
UBXN2A-204ENST00000479859 GSTP1P09211 210 aaKnown RBP9.76□□□□□ -0.85
UBXN2A-204ENST00000479859 SNRPNP63162 240 aaKnown RBP9.76□□□□□ -0.85
UBXN2A-204ENST00000479859 SUZ12Q15022 739 aaKnown RBP9.76□□□□□ -0.85
UBXN2A-204ENST00000479859 POU4F3Q15319 338 aa9.76□□□□□ -0.85
UBXN2A-204ENST00000479859 FBXL19Q6PCT2 694 aa9.76□□□□□ -0.85
UBXN2A-204ENST00000479859 LINC00114Q6XXX2 140 aa9.76□□□□□ -0.85
UBXN2A-204ENST00000479859 TRIM42Q8IWZ5 723 aa9.76□□□□□ -0.85
UBXN2A-204ENST00000479859 TRIM11Q96F44 468 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms