RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 GRAPQ13588 217 aa12.81□□□□□ -0.36
CDK11A-216ENST00000479362 RBM26Q5T8P6 1007 aaKnown RBP12.81□□□□□ -0.36
CDK11A-216ENST00000479362 ERC1Q8IUD2 1116 aa12.81□□□□□ -0.36
CDK11A-216ENST00000479362 GRAPLQ8TC17 118 aaPredicted RBP12.81□□□□□ -0.36
CDK11A-216ENST00000479362 MPHOSPH8Q99549 860 aa12.81□□□□□ -0.36
CDK11A-216ENST00000479362 LAMB1P07942 1786 aa12.8□□□□□ -0.36
CDK11A-216ENST00000479362 APBB1O00213 710 aa12.8□□□□□ -0.36
CDK11A-216ENST00000479362 RAB11FIP3O75154 756 aa12.8□□□□□ -0.36
CDK11A-216ENST00000479362 CIAO1O76071 339 aa12.8□□□□□ -0.36
CDK11A-216ENST00000479362 KIF4BQ2VIQ3 1234 aa12.8□□□□□ -0.36
CDK11A-216ENST00000479362 LDHAL6AQ6ZMR3 332 aa12.8□□□□□ -0.36
CDK11A-216ENST00000479362 CELF1Q92879 486 aaKnown RBP12.8□□□□□ -0.36
CDK11A-216ENST00000479362 PUS3Q9BZE2 481 aaKnown RBP12.8□□□□□ -0.36
CDK11A-216ENST00000479362 CNNM1Q9NRU3 951 aa12.8□□□□□ -0.36
CDK11A-216ENST00000479362 ZNF609O15014 1411 aa12.79□□□□□ -0.36
CDK11A-216ENST00000479362 ARAP2Q8WZ64 1704 aa12.79□□□□□ -0.36
CDK11A-216ENST00000479362 EYSQ5T1H1 3165 aa12.79□□□□□ -0.36
CDK11A-216ENST00000479362 RPS12P25398 132 aaKnown RBP12.79□□□□□ -0.36
CDK11A-216ENST00000479362 IL15P40933 162 aaPredicted RBP12.79□□□□□ -0.36
CDK11A-216ENST00000479362 RPS8P62241 208 aaKnown RBP12.79□□□□□ -0.36
CDK11A-216ENST00000479362 LRRC24Q50LG9 513 aa12.79□□□□□ -0.36
CDK11A-216ENST00000479362 ATG9AQ7Z3C6 839 aa12.79□□□□□ -0.36
CDK11A-216ENST00000479362 MPNDQ8N594 471 aa12.79□□□□□ -0.36
CDK11A-216ENST00000479362 LRRCC1Q9C099 1032 aa12.79□□□□□ -0.36
CDK11A-216ENST00000479362 TMX4Q9H1E5 349 aaPredicted RBP12.79□□□□□ -0.36
CDK11A-216ENST00000479362 UBE2Q2LH0YL09 131 aa12.78□□□□□ -0.36
CDK11A-216ENST00000479362 MKRN3Q13064 507 aaKnown RBP12.78□□□□□ -0.36
CDK11A-216ENST00000479362 SP8Q8IXZ3 490 aa12.78□□□□□ -0.36
CDK11A-216ENST00000479362 RHPN1Q8TCX5 695 aa12.78□□□□□ -0.36
CDK11A-216ENST00000479362 KIF1BPQ96EK5 621 aa12.78□□□□□ -0.36
CDK11A-216ENST00000479362 PRO3102Q9H379 93 aa12.78□□□□□ -0.36
CDK11A-216ENST00000479362 BSDC1Q9NW68 430 aaPredicted RBP12.78□□□□□ -0.36
CDK11A-216ENST00000479362 PTPN22Q9Y2R2 807 aa12.78□□□□□ -0.36
CDK11A-216ENST00000479362 SASH1O94885 1247 aa12.77□□□□□ -0.37
CDK11A-216ENST00000479362 NUCB1Q02818 461 aa12.77□□□□□ -0.37
CDK11A-216ENST00000479362 SREBF2Q12772 1141 aa12.77□□□□□ -0.37
CDK11A-216ENST00000479362 METTL24Q5JXM2 366 aa12.77□□□□□ -0.37
CDK11A-216ENST00000479362 ANKRD45Q5TZF3 282 aa12.77□□□□□ -0.37
CDK11A-216ENST00000479362 ANGEL2Q5VTE6 544 aaKnown RBP12.77□□□□□ -0.37
CDK11A-216ENST00000479362 TMC4Q7Z404 712 aa12.77□□□□□ -0.37
CDK11A-216ENST00000479362 DBNDD1Q9H9R9 158 aa12.77□□□□□ -0.37
CDK11A-216ENST00000479362 KCNQ5Q9NR82 932 aa12.77□□□□□ -0.37
CDK11A-216ENST00000479362 RIPOR2Q9Y4F9 1068 aa12.77□□□□□ -0.37
CDK11A-216ENST00000479362 MROH5Q6ZUA9 1318 aa12.77□□□□□ -0.37
CDK11A-216ENST00000479362 SMARCA5O60264 1052 aaPredicted RBP12.76□□□□□ -0.37
CDK11A-216ENST00000479362 BBOX1O75936 387 aa12.76□□□□□ -0.37
CDK11A-216ENST00000479362 CAP1Q01518 475 aa12.76□□□□□ -0.37
CDK11A-216ENST00000479362 TFCP2Q12800 502 aa12.76□□□□□ -0.37
CDK11A-216ENST00000479362 PIP4P2Q8N4L2 257 aa12.76□□□□□ -0.37
CDK11A-216ENST00000479362 ZNF333Q96JL9 665 aa12.76□□□□□ -0.37
CDK11A-216ENST00000479362 IL1RAPL2Q9NP60 686 aa12.76□□□□□ -0.37
CDK11A-216ENST00000479362 CEP126Q9P2H0 1117 aa12.76□□□□□ -0.37
CDK11A-216ENST00000479362 PSME4Q14997 1843 aa12.76□□□□□ -0.37
CDK11A-216ENST00000479362 SOX1O00570 391 aaPredicted RBP12.75□□□□□ -0.37
CDK11A-216ENST00000479362 CHRNDQ07001 517 aa12.75□□□□□ -0.37
CDK11A-216ENST00000479362 CHD1LQ86WJ1 897 aa12.75□□□□□ -0.37
CDK11A-216ENST00000479362 VGLL2Q8N8G2 317 aa12.75□□□□□ -0.37
CDK11A-216ENST00000479362 COL25A1Q9BXS0 654 aaPredicted RBP12.75□□□□□ -0.37
CDK11A-216ENST00000479362 LNPKQ9C0E8 428 aa12.75□□□□□ -0.37
CDK11A-216ENST00000479362 BCL11AQ9H165 835 aa12.75□□□□□ -0.37
CDK11A-216ENST00000479362 SCAF8Q9UPN6 1271 aaKnown RBP12.75□□□□□ -0.37
CDK11A-216ENST00000479362 MUC3AQ02505 3323 aa12.74□□□□□ -0.37
CDK11A-216ENST00000479362 SCARF1Q14162 830 aa12.74□□□□□ -0.37
CDK11A-216ENST00000479362 CLASRPQ8N2M8 674 aaKnown RBP12.74□□□□□ -0.37
CDK11A-216ENST00000479362 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
CDK11A-216ENST00000479362 ANKRD2Q9GZV1 360 aa12.74□□□□□ -0.37
CDK11A-216ENST00000479362 MINPP1Q9UNW1 487 aa12.74□□□□□ -0.37
CDK11A-216ENST00000479362 XDHP47989 1333 aa12.73□□□□□ -0.37
CDK11A-216ENST00000479362 ECE2O60344 883 aa12.73□□□□□ -0.37
CDK11A-216ENST00000479362 PDE8BO95263 885 aa12.73□□□□□ -0.37
CDK11A-216ENST00000479362 ZNF280AP59817 542 aaPredicted RBP12.73□□□□□ -0.37
CDK11A-216ENST00000479362 PUM3Q15397 648 aaKnown RBP12.73□□□□□ -0.37
CDK11A-216ENST00000479362 TNNI3KQ59H18 835 aa12.73□□□□□ -0.37
CDK11A-216ENST00000479362 PRAMEF18Q5VWM3 479 aa12.73□□□□□ -0.37
CDK11A-216ENST00000479362 AACSQ86V21 672 aa12.73□□□□□ -0.37
CDK11A-216ENST00000479362 HELBQ8NG08 1087 aaPredicted RBP12.73□□□□□ -0.37
CDK11A-216ENST00000479362 CD99L2Q8TCZ2 262 aa12.73□□□□□ -0.37
CDK11A-216ENST00000479362 SPOCK2Q92563 424 aa12.73□□□□□ -0.37
CDK11A-216ENST00000479362 GPR108Q9NPR9 543 aa12.73□□□□□ -0.37
CDK11A-216ENST00000479362 AKAP2Q9Y2D5 859 aa12.73□□□□□ -0.37
CDK11A-216ENST00000479362 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.73□□□□□ -0.37
CDK11A-216ENST00000479362 FPGT-TNNI3KV9GXZ4 949 aa12.73□□□□□ -0.37
CDK11A-216ENST00000479362 MYH13Q9UKX3 1938 aa12.72□□□□□ -0.37
CDK11A-216ENST00000479362 LAMA2P24043 3122 aaKnown RBP12.72□□□□□ -0.37
CDK11A-216ENST00000479362 TAF5LO75529 589 aa12.72□□□□□ -0.37
CDK11A-216ENST00000479362 ALDH1A1P00352 501 aa12.72□□□□□ -0.37
CDK11A-216ENST00000479362 IFIT2P09913 472 aaKnown RBP12.72□□□□□ -0.37
CDK11A-216ENST00000479362 ATP2B3Q16720 1220 aa12.72□□□□□ -0.37
CDK11A-216ENST00000479362 WASHC4Q2M389 1173 aa12.72□□□□□ -0.37
CDK11A-216ENST00000479362 LRCH3Q96II8 777 aa12.72□□□□□ -0.37
CDK11A-216ENST00000479362 ANKIB1Q9P2G1 1089 aa12.72□□□□□ -0.37
CDK11A-216ENST00000479362 PRUNE2Q8WUY3 3088 aa12.72□□□□□ -0.37
CDK11A-216ENST00000479362 A0A1B0GUL7 405 aa12.71□□□□□ -0.37
CDK11A-216ENST00000479362 VIL1P09327 827 aaKnown RBP12.71□□□□□ -0.37
CDK11A-216ENST00000479362 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.37
CDK11A-216ENST00000479362 SLC5A1P13866 664 aa12.71□□□□□ -0.37
CDK11A-216ENST00000479362 KCNJ4P48050 445 aa12.71□□□□□ -0.37
CDK11A-216ENST00000479362 GPSM2P81274 684 aa12.71□□□□□ -0.37
CDK11A-216ENST00000479362 IFNL1Q8IU54 200 aa12.71□□□□□ -0.37
CDK11A-216ENST00000479362 EAF2Q96CJ1 260 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms