RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CRKP46108 304 aa18.99■□□□□ 0.63
C9orf3-217ENST00000479161 CST9Q5W186 159 aa18.99■□□□□ 0.63
C9orf3-217ENST00000479161 USP48Q86UV5 1035 aa18.99■□□□□ 0.63
C9orf3-217ENST00000479161 SPATA5Q8NB90 893 aa18.99■□□□□ 0.63
C9orf3-217ENST00000479161 FAM163AQ96GL9 167 aaPredicted RBP18.99■□□□□ 0.63
C9orf3-217ENST00000479161 HHIPL1Q96JK4 782 aa18.99■□□□□ 0.63
C9orf3-217ENST00000479161 PRMT6Q96LA8 375 aaPredicted RBP18.99■□□□□ 0.63
C9orf3-217ENST00000479161 HMG20BQ9P0W2 317 aa18.99■□□□□ 0.63
C9orf3-217ENST00000479161 DBNLQ9UJU6 430 aaKnown RBP18.99■□□□□ 0.63
C9orf3-217ENST00000479161 PPP2R3BQ9Y5P8 575 aa18.99■□□□□ 0.63
C9orf3-217ENST00000479161 F8W031 263 aaPredicted RBP18.98■□□□□ 0.63
C9orf3-217ENST00000479161 LDHBP07195 334 aaKnown RBP18.98■□□□□ 0.63
C9orf3-217ENST00000479161 GRIK5Q16478 980 aa18.98■□□□□ 0.63
C9orf3-217ENST00000479161 FKBP1CQ5VVH2 108 aa18.98■□□□□ 0.63
C9orf3-217ENST00000479161 TMED8Q6PL24 325 aaPredicted RBP18.98■□□□□ 0.63
C9orf3-217ENST00000479161 CRBNQ96SW2 442 aa18.98■□□□□ 0.63
C9orf3-217ENST00000479161 DBNDD2Q9BQY9 259 aa18.98■□□□□ 0.63
C9orf3-217ENST00000479161 ASTN2O75129 1339 aaPredicted RBP18.98■□□□□ 0.63
C9orf3-217ENST00000479161 TRAF5O00463 557 aa18.97■□□□□ 0.63
C9orf3-217ENST00000479161 FKBP1BP68106 108 aa18.97■□□□□ 0.63
C9orf3-217ENST00000479161 SLF2Q8IX21 1173 aa18.97■□□□□ 0.63
C9orf3-217ENST00000479161 PCDHB15Q9Y5E8 787 aa18.97■□□□□ 0.63
C9orf3-217ENST00000479161 MYH2Q9UKX2 1941 aa18.96■□□□□ 0.63
C9orf3-217ENST00000479161 RASSF10A6NK89 507 aa18.96■□□□□ 0.63
C9orf3-217ENST00000479161 MCAMP43121 646 aa18.96■□□□□ 0.63
C9orf3-217ENST00000479161 TNFAIP1Q13829 316 aa18.96■□□□□ 0.63
C9orf3-217ENST00000479161 SPDYE2Q495Y8 402 aa18.96■□□□□ 0.63
C9orf3-217ENST00000479161 TTC39AQ5SRH9 613 aa18.96■□□□□ 0.63
C9orf3-217ENST00000479161 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.96■□□□□ 0.63
C9orf3-217ENST00000479161 LRRCC1Q9C099 1032 aa18.96■□□□□ 0.63
C9orf3-217ENST00000479161 CELF2O95319 508 aaKnown RBP18.95■□□□□ 0.62
C9orf3-217ENST00000479161 PRDX5P30044 214 aa18.95■□□□□ 0.62
C9orf3-217ENST00000479161 RBM5P52756 815 aaKnown RBP eCLIP18.95■□□□□ 0.622e-7■■■■□ 26.1
C9orf3-217ENST00000479161 HDAC1Q13547 482 aaPredicted RBP18.95■□□□□ 0.62
C9orf3-217ENST00000479161 APOBEC3HQ6NTF7 200 aaKnown RBP18.95■□□□□ 0.62
C9orf3-217ENST00000479161 AACSQ86V21 672 aa18.95■□□□□ 0.62
C9orf3-217ENST00000479161 KLRG1Q96E93 195 aa18.95■□□□□ 0.62
C9orf3-217ENST00000479161 SUPT16HQ9Y5B9 1047 aaKnown RBP18.95■□□□□ 0.62
C9orf3-217ENST00000479161 TLL2Q9Y6L7 1015 aa18.95■□□□□ 0.62
C9orf3-217ENST00000479161 MAP4K4O95819 1239 aaPredicted RBP18.94■□□□□ 0.62
C9orf3-217ENST00000479161 SAPCD2Q86UD0 394 aa18.94■□□□□ 0.62
C9orf3-217ENST00000479161 CDCA5Q96FF9 252 aa18.94■□□□□ 0.62
C9orf3-217ENST00000479161 CCDC8Q9H0W5 538 aaPredicted RBP18.94■□□□□ 0.62
C9orf3-217ENST00000479161 GAKO14976 1311 aa18.94■□□□□ 0.62
C9orf3-217ENST00000479161 CNTNAP1P78357 1384 aa18.93■□□□□ 0.62
C9orf3-217ENST00000479161 ADM5C9JUS6 153 aa18.93■□□□□ 0.62
C9orf3-217ENST00000479161 ERICH6Q7L0X2 663 aa18.93■□□□□ 0.62
C9orf3-217ENST00000479161 FAM83AQ86UY5 434 aa18.93■□□□□ 0.62
C9orf3-217ENST00000479161 DEFB129Q9H1M3 183 aa18.93■□□□□ 0.62
C9orf3-217ENST00000479161 IL1RAPL2Q9NP60 686 aa18.93■□□□□ 0.62
C9orf3-217ENST00000479161 ZNF70Q9UC06 446 aaPredicted RBP18.93■□□□□ 0.62
C9orf3-217ENST00000479161 IFIT2P09913 472 aaKnown RBP18.92■□□□□ 0.62
C9orf3-217ENST00000479161 GSTO1P78417 241 aa18.92■□□□□ 0.62
C9orf3-217ENST00000479161 FMR1Q06787 632 aaKnown RBP eCLIP18.92■□□□□ 0.62
C9orf3-217ENST00000479161 C2orf69Q8N8R5 385 aa18.92■□□□□ 0.62
C9orf3-217ENST00000479161 JMYQ8N9B5 988 aa18.92■□□□□ 0.62
C9orf3-217ENST00000479161 TLR7Q9NYK1 1049 aaKnown RBP18.92■□□□□ 0.62
C9orf3-217ENST00000479161 ABCF2Q9UG63 623 aa18.92■□□□□ 0.62
C9orf3-217ENST00000479161 PCDHAC2Q9Y5I4 1007 aa18.92■□□□□ 0.62
C9orf3-217ENST00000479161 PAPPA2Q9BXP8 1791 aa18.91■□□□□ 0.62
C9orf3-217ENST00000479161 UNCXA6NJT0 531 aa18.91■□□□□ 0.62
C9orf3-217ENST00000479161 LDHCP07864 332 aa18.91■□□□□ 0.62
C9orf3-217ENST00000479161 NF2P35240 595 aa18.91■□□□□ 0.62
C9orf3-217ENST00000479161 TNNI2P48788 182 aa18.91■□□□□ 0.62
C9orf3-217ENST00000479161 DEFB115Q30KQ5 88 aa18.91■□□□□ 0.62
C9orf3-217ENST00000479161 DZIP1Q86YF9 867 aaKnown RBP18.91■□□□□ 0.62
C9orf3-217ENST00000479161 GCC1Q96CN9 775 aa18.91■□□□□ 0.62
C9orf3-217ENST00000479161 TDRD3Q9H7E2 651 aaKnown RBP18.91■□□□□ 0.62
C9orf3-217ENST00000479161 GBA2Q9HCG7 927 aaPredicted RBP18.91■□□□□ 0.62
C9orf3-217ENST00000479161 DAGLAQ9Y4D2 1042 aa18.91■□□□□ 0.62
C9orf3-217ENST00000479161 CYP2E1P05181 493 aaPredicted RBP18.9■□□□□ 0.62
C9orf3-217ENST00000479161 HTRA3P83110 453 aa18.9■□□□□ 0.62
C9orf3-217ENST00000479161 SUPT20HL1Q3ZLR7 823 aa18.9■□□□□ 0.62
C9orf3-217ENST00000479161 NSUN4Q96CB9 384 aaKnown RBP18.9■□□□□ 0.62
C9orf3-217ENST00000479161 TMOD2Q9NZR1 351 aa18.9■□□□□ 0.62
C9orf3-217ENST00000479161 GPR75-ASB3A0A0A6YYF3 556 aa18.89■□□□□ 0.61
C9orf3-217ENST00000479161 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
C9orf3-217ENST00000479161 ATP5JP18859 108 aa18.89■□□□□ 0.61
C9orf3-217ENST00000479161 MECOMQ03112 1051 aa18.89■□□□□ 0.61
C9orf3-217ENST00000479161 PI16Q6UXB8 463 aa18.89■□□□□ 0.61
C9orf3-217ENST00000479161 LRP2BPQ9P2M1 347 aa18.89■□□□□ 0.61
C9orf3-217ENST00000479161 ABT1Q9ULW3 272 aaKnown RBP18.89■□□□□ 0.61
C9orf3-217ENST00000479161 RPAP1Q9BWH6 1393 aaPredicted RBP18.89■□□□□ 0.61
C9orf3-217ENST00000479161 MAST2Q6P0Q8 1798 aa18.88■□□□□ 0.61
C9orf3-217ENST00000479161 DOCK2Q92608 1830 aa18.88■□□□□ 0.61
C9orf3-217ENST00000479161 MYO5AQ9Y4I1 1855 aaKnown RBP18.88■□□□□ 0.61
C9orf3-217ENST00000479161 CLRN2A0PK11 232 aa18.88■□□□□ 0.61
C9orf3-217ENST00000479161 ECE1P42892 770 aa18.88■□□□□ 0.61
C9orf3-217ENST00000479161 RASA3Q14644 834 aa18.88■□□□□ 0.61
C9orf3-217ENST00000479161 TTF1Q15361 905 aaPredicted RBP18.88■□□□□ 0.61
C9orf3-217ENST00000479161 DIXDC1Q155Q3 683 aa18.88■□□□□ 0.61
C9orf3-217ENST00000479161 MAP3K11Q16584 847 aa18.88■□□□□ 0.61
C9orf3-217ENST00000479161 ZNF384Q8TF68 577 aa18.88■□□□□ 0.61
C9orf3-217ENST00000479161 MROH7-TTC4A0A0A0MT08 1334 aa18.88■□□□□ 0.61
C9orf3-217ENST00000479161 AOX1Q06278 1338 aa18.88■□□□□ 0.61
C9orf3-217ENST00000479161 APBB1O00213 710 aa18.87■□□□□ 0.61
C9orf3-217ENST00000479161 ZAP70P43403 619 aa18.87■□□□□ 0.61
C9orf3-217ENST00000479161 CDC42EP5Q6NZY7 148 aa18.87■□□□□ 0.61
C9orf3-217ENST00000479161 CERS3Q8IU89 383 aa18.87■□□□□ 0.61
C9orf3-217ENST00000479161 HOOK2Q96ED9 719 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms