RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 RAB34Q9BZG1 259 aa16.79■□□□□ 0.28
HDAC6-220ENST00000477528 ADGRB2O60241 1585 aa16.79■□□□□ 0.28
HDAC6-220ENST00000477528 DIP2BQ9P265 1576 aa16.79■□□□□ 0.28
HDAC6-220ENST00000477528 ARMT1Q9H993 441 aa16.79■□□□□ 0.28
HDAC6-220ENST00000477528 HEG1Q9ULI3 1381 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 ATP10DQ9P241 1426 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 GOLGA6L9A6NEM1 432 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 URI1O94763 535 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-220ENST00000477528 GNAQP50148 359 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 ZNF589Q86UQ0 364 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-220ENST00000477528 ANKRD2Q9GZV1 360 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 ZHX3Q9H4I2 956 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 DENND2AQ9ULE3 1009 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 ELP1O95163 1332 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 ZNF532Q9HCE3 1301 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 C6orf229H3BNL8 230 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 RUFY1Q96T51 708 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 IGKV5-2P06315 115 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 UBA7P41226 1012 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 NECTIN1Q15223 517 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 SPATA5Q8NB90 893 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 CBX8Q9HC52 389 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 TCP11L1Q9NUJ3 509 aa16.78■□□□□ 0.28
HDAC6-220ENST00000477528 MPHOSPH10O00566 681 aaKnown RBP16.77■□□□□ 0.28
HDAC6-220ENST00000477528 TOM1O60784 492 aa16.77■□□□□ 0.28
HDAC6-220ENST00000477528 ZMYM1Q5SVZ6 1142 aa16.77■□□□□ 0.28
HDAC6-220ENST00000477528 ATG3Q9NT62 314 aa16.77■□□□□ 0.28
HDAC6-220ENST00000477528 CGNQ9P2M7 1197 aaKnown RBP16.77■□□□□ 0.28
HDAC6-220ENST00000477528 ERLIN1O75477 346 aa16.77■□□□□ 0.28
HDAC6-220ENST00000477528 KRI1Q8N9T8 703 aaKnown RBP16.77■□□□□ 0.28
HDAC6-220ENST00000477528 KIF20BQ96Q89 1820 aa16.77■□□□□ 0.28
HDAC6-220ENST00000477528 KIF5CO60282 957 aa16.77■□□□□ 0.28
HDAC6-220ENST00000477528 OTUD7BQ6GQQ9 843 aa16.77■□□□□ 0.28
HDAC6-220ENST00000477528 STX8Q9UNK0 236 aa16.77■□□□□ 0.28
HDAC6-220ENST00000477528 MAP3K15Q6ZN16 1313 aa16.77■□□□□ 0.27
HDAC6-220ENST00000477528 LMOD1P29536 600 aaPredicted RBP16.77■□□□□ 0.27
HDAC6-220ENST00000477528 CASQ1P31415 396 aa16.77■□□□□ 0.27
HDAC6-220ENST00000477528 TMEM266Q2M3C6 531 aa16.77■□□□□ 0.27
HDAC6-220ENST00000477528 DIP2AQ14689 1571 aa16.76■□□□□ 0.27
HDAC6-220ENST00000477528 TSPY3P0CV98 308 aa16.76■□□□□ 0.27
HDAC6-220ENST00000477528 TSPY8P0CW00 308 aa16.76■□□□□ 0.27
HDAC6-220ENST00000477528 CYP27B1O15528 508 aa16.76■□□□□ 0.27
HDAC6-220ENST00000477528 CYP21A2P08686 494 aa16.76■□□□□ 0.27
HDAC6-220ENST00000477528 KRT2P35908 639 aa16.76■□□□□ 0.27
HDAC6-220ENST00000477528 CLEC17AQ6ZS10 378 aa16.76■□□□□ 0.27
HDAC6-220ENST00000477528 TTC6Q86TZ1 520 aa16.76■□□□□ 0.27
HDAC6-220ENST00000477528 CRACR2BQ8N4Y2 399 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-220ENST00000477528 ZNF397Q8NF99 534 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-220ENST00000477528 CCDC148Q8NFR7 591 aa16.76■□□□□ 0.27
HDAC6-220ENST00000477528 ZKSCAN3Q9BRR0 538 aa16.76■□□□□ 0.27
HDAC6-220ENST00000477528 TNNT3P45378 269 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-220ENST00000477528 ITSN1Q15811 1721 aa16.76■□□□□ 0.27
HDAC6-220ENST00000477528 SLC4A8Q2Y0W8 1093 aa16.76■□□□□ 0.27
HDAC6-220ENST00000477528 RILPL1Q5EBL4 403 aa16.76■□□□□ 0.27
HDAC6-220ENST00000477528 CPLX3Q8WVH0 158 aa16.76■□□□□ 0.27
HDAC6-220ENST00000477528 PUS3Q9BZE2 481 aaKnown RBP16.75■□□□□ 0.27
HDAC6-220ENST00000477528 RBM28Q9NW13 759 aaKnown RBP16.75■□□□□ 0.27
HDAC6-220ENST00000477528 RMND1Q9NWS8 449 aa16.75■□□□□ 0.27
HDAC6-220ENST00000477528 DEXIO95424 95 aa16.75■□□□□ 0.27
HDAC6-220ENST00000477528 AFMP43652 599 aa16.75■□□□□ 0.27
HDAC6-220ENST00000477528 LIG1P18858 919 aa16.75■□□□□ 0.27
HDAC6-220ENST00000477528 ST5P78524 1137 aa16.75■□□□□ 0.27
HDAC6-220ENST00000477528 RTCBQ9Y3I0 505 aaKnown RBP16.75■□□□□ 0.27
HDAC6-220ENST00000477528 PXDNLA1KZ92 1463 aa16.75■□□□□ 0.27
HDAC6-220ENST00000477528 FKBP15Q5T1M5 1219 aa16.75■□□□□ 0.27
HDAC6-220ENST00000477528 GIGYF2Q6Y7W6 1299 aaKnown RBP16.75■□□□□ 0.27
HDAC6-220ENST00000477528 KIAA1328Q86T90 577 aa16.75■□□□□ 0.27
HDAC6-220ENST00000477528 CALML3P27482 149 aa16.74■□□□□ 0.27
HDAC6-220ENST00000477528 NUP88Q99567 741 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-220ENST00000477528 YEATS4O95619 227 aa16.74■□□□□ 0.27
HDAC6-220ENST00000477528 AMPD3Q01432 767 aa16.74■□□□□ 0.27
HDAC6-220ENST00000477528 ZNF75DP51815 510 aa16.74■□□□□ 0.27
HDAC6-220ENST00000477528 TMCO3Q6UWJ1 677 aa16.74■□□□□ 0.27
HDAC6-220ENST00000477528 ZNF804AQ7Z570 1209 aa16.74■□□□□ 0.27
HDAC6-220ENST00000477528 IFNKQ9P0W0 207 aa16.74■□□□□ 0.27
HDAC6-220ENST00000477528 SPATA31A3Q5VYP0 1347 aa16.74■□□□□ 0.27
HDAC6-220ENST00000477528 FGAP02671 866 aa16.73■□□□□ 0.27
HDAC6-220ENST00000477528 CCDC96Q2M329 555 aa16.73■□□□□ 0.27
HDAC6-220ENST00000477528 NOM1Q5C9Z4 860 aaKnown RBP16.73■□□□□ 0.27
HDAC6-220ENST00000477528 CTAGE1Q96RT6 745 aa16.73■□□□□ 0.27
HDAC6-220ENST00000477528 MCM9Q9NXL9 1143 aa16.73■□□□□ 0.27
HDAC6-220ENST00000477528 H7C1W4 665 aa16.73■□□□□ 0.27
HDAC6-220ENST00000477528 CALML4Q96GE6 196 aa16.73■□□□□ 0.27
HDAC6-220ENST00000477528 SCRN1Q12765 414 aa16.73■□□□□ 0.27
HDAC6-220ENST00000477528 KRT40Q6A162 431 aa16.73■□□□□ 0.27
HDAC6-220ENST00000477528 DHX58Q96C10 678 aa16.73■□□□□ 0.27
HDAC6-220ENST00000477528 ASAP1Q9ULH1 1129 aa16.73■□□□□ 0.27
HDAC6-220ENST00000477528 PATL2C9JE40 543 aaKnown RBP16.73■□□□□ 0.27
HDAC6-220ENST00000477528 LARGE1O95461 756 aa16.73■□□□□ 0.27
HDAC6-220ENST00000477528 TUBB4AP04350 444 aa16.73■□□□□ 0.27
HDAC6-220ENST00000477528 EPHA10Q5JZY3 1008 aa16.73■□□□□ 0.27
HDAC6-220ENST00000477528 C8orf37Q96NL8 207 aa16.73■□□□□ 0.27
HDAC6-220ENST00000477528 MAP2P11137 1827 aaKnown RBP16.73■□□□□ 0.27
HDAC6-220ENST00000477528 FGFR1OPO95684 399 aaKnown RBP16.72■□□□□ 0.27
HDAC6-220ENST00000477528 MYL5Q02045 173 aa16.72■□□□□ 0.27
HDAC6-220ENST00000477528 VAT1LQ9HCJ6 419 aa16.72■□□□□ 0.27
HDAC6-220ENST00000477528 SPAG1Q07617 926 aa16.72■□□□□ 0.27
HDAC6-220ENST00000477528 KIF4BQ2VIQ3 1234 aa16.72■□□□□ 0.27
HDAC6-220ENST00000477528 LMTK3Q96Q04 1460 aa16.72■□□□□ 0.27
HDAC6-220ENST00000477528 PDE6AP16499 860 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms