RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 DZIP1LQ8IYY4 767 aaKnown RBP16.75■□□□□ 0.27
HMGCS2-203ENST00000476640 USP44Q9H0E7 712 aa16.75■□□□□ 0.27
HMGCS2-203ENST00000476640 SMC4Q9NTJ3 1288 aa16.75■□□□□ 0.27
HMGCS2-203ENST00000476640 HDAC5Q9UQL6 1122 aa16.75■□□□□ 0.27
HMGCS2-203ENST00000476640 AK9Q5TCS8 1911 aa16.74■□□□□ 0.27
HMGCS2-203ENST00000476640 CRKP46108 304 aa16.74■□□□□ 0.27
HMGCS2-203ENST00000476640 CHAF1AQ13111 956 aaPredicted RBP16.74■□□□□ 0.27
HMGCS2-203ENST00000476640 PUM3Q15397 648 aaKnown RBP16.74■□□□□ 0.27
HMGCS2-203ENST00000476640 TEKT1Q969V4 418 aa16.74■□□□□ 0.27
HMGCS2-203ENST00000476640 CLMNQ96JQ2 1002 aa16.74■□□□□ 0.27
HMGCS2-203ENST00000476640 TDRD3Q9H7E2 651 aaKnown RBP16.74■□□□□ 0.27
HMGCS2-203ENST00000476640 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.74■□□□□ 0.27
HMGCS2-203ENST00000476640 FZD1Q9UP38 647 aa16.74■□□□□ 0.27
HMGCS2-203ENST00000476640 SUGT1Q9Y2Z0 365 aa16.74■□□□□ 0.27
HMGCS2-203ENST00000476640 USP2O75604 605 aaPredicted RBP16.73■□□□□ 0.27
HMGCS2-203ENST00000476640 IFNL1Q8IU54 200 aa16.73■□□□□ 0.27
HMGCS2-203ENST00000476640 VGLL2Q8N8G2 317 aa16.73■□□□□ 0.27
HMGCS2-203ENST00000476640 TMOD2Q9NZR1 351 aa16.73■□□□□ 0.27
HMGCS2-203ENST00000476640 IQSEC3Q9UPP2 1182 aaPredicted RBP16.73■□□□□ 0.27
HMGCS2-203ENST00000476640 SLC5A1P13866 664 aa16.72■□□□□ 0.27
HMGCS2-203ENST00000476640 HOOK2Q96ED9 719 aa16.72■□□□□ 0.27
HMGCS2-203ENST00000476640 MRIQ9BWK5 157 aa16.72■□□□□ 0.27
HMGCS2-203ENST00000476640 HPS5Q9UPZ3 1129 aa16.72■□□□□ 0.27
HMGCS2-203ENST00000476640 AOX1Q06278 1338 aa16.71■□□□□ 0.27
HMGCS2-203ENST00000476640 TCP10L2B9ZVM9 353 aa16.71■□□□□ 0.27
HMGCS2-203ENST00000476640 EYA2O00167 538 aa16.71■□□□□ 0.27
HMGCS2-203ENST00000476640 UBTFL1P0CB47 393 aaPredicted RBP16.71■□□□□ 0.27
HMGCS2-203ENST00000476640 SOX10P56693 466 aa16.71■□□□□ 0.27
HMGCS2-203ENST00000476640 FBXO46Q6PJ61 603 aaPredicted RBP16.71■□□□□ 0.27
HMGCS2-203ENST00000476640 KLHDC4Q8TBB5 520 aa16.71■□□□□ 0.27
HMGCS2-203ENST00000476640 FBXO3Q9UK99 471 aa16.71■□□□□ 0.27
HMGCS2-203ENST00000476640 BCAMP50895 628 aa16.7■□□□□ 0.26
HMGCS2-203ENST00000476640 WDR66Q8TBY9 1149 aa16.7■□□□□ 0.26
HMGCS2-203ENST00000476640 LPIN2Q92539 896 aa16.7■□□□□ 0.26
HMGCS2-203ENST00000476640 API5Q9BZZ5 524 aaKnown RBP16.7■□□□□ 0.26
HMGCS2-203ENST00000476640 CSADQ9Y600 493 aa16.7■□□□□ 0.26
HMGCS2-203ENST00000476640 TNRC18O15417 2968 aaPredicted RBP16.7■□□□□ 0.26
HMGCS2-203ENST00000476640 FGFR2P21802 821 aa16.69■□□□□ 0.26
HMGCS2-203ENST00000476640 FKBP1CQ5VVH2 108 aa16.69■□□□□ 0.26
HMGCS2-203ENST00000476640 TRMT2AQ8IZ69 625 aaKnown RBP16.69■□□□□ 0.26
HMGCS2-203ENST00000476640 CDCA7LQ96GN5 454 aa16.69■□□□□ 0.26
HMGCS2-203ENST00000476640 ZDHHC15Q96MV8 337 aa16.69■□□□□ 0.26
HMGCS2-203ENST00000476640 TEPSINQ96N21 525 aa16.69■□□□□ 0.26
HMGCS2-203ENST00000476640 TMEM39BQ9GZU3 492 aa16.69■□□□□ 0.26
HMGCS2-203ENST00000476640 IGF2BP3O00425 579 aaKnown RBP eCLIP16.68■□□□□ 0.26
HMGCS2-203ENST00000476640 MAP3K9P80192 1104 aa16.68■□□□□ 0.26
HMGCS2-203ENST00000476640 HHIPL2Q6UWX4 724 aa16.68■□□□□ 0.26
HMGCS2-203ENST00000476640 FAM83AQ86UY5 434 aa16.68■□□□□ 0.26
HMGCS2-203ENST00000476640 OPTNQ96CV9 577 aa16.68■□□□□ 0.26
HMGCS2-203ENST00000476640 ERO1AQ96HE7 468 aa16.68■□□□□ 0.26
HMGCS2-203ENST00000476640 ELP3Q9H9T3 547 aa16.68■□□□□ 0.26
HMGCS2-203ENST00000476640 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
HMGCS2-203ENST00000476640 CEP126Q9P2H0 1117 aa16.68■□□□□ 0.26
HMGCS2-203ENST00000476640 TESPA1A2RU30 521 aaPredicted RBP16.67■□□□□ 0.26
HMGCS2-203ENST00000476640 WDHD1O75717 1129 aaPredicted RBP16.67■□□□□ 0.26
HMGCS2-203ENST00000476640 CIAO1O76071 339 aa16.67■□□□□ 0.26
HMGCS2-203ENST00000476640 RFX5P48382 616 aaPredicted RBP16.67■□□□□ 0.26
HMGCS2-203ENST00000476640 R3HDMLQ9H3Y0 253 aa16.67■□□□□ 0.26
HMGCS2-203ENST00000476640 MYH2Q9UKX2 1941 aa16.66■□□□□ 0.26
HMGCS2-203ENST00000476640 CCER2I3L3R5 266 aa16.66■□□□□ 0.26
HMGCS2-203ENST00000476640 GTF2A2P52657 109 aa16.66■□□□□ 0.26
HMGCS2-203ENST00000476640 GRIK5Q16478 980 aa16.66■□□□□ 0.26
HMGCS2-203ENST00000476640 ATP2B3Q16720 1220 aa16.66■□□□□ 0.26
HMGCS2-203ENST00000476640 DCAF15Q66K64 600 aa16.66■□□□□ 0.26
HMGCS2-203ENST00000476640 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.66■□□□□ 0.26
HMGCS2-203ENST00000476640 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.66■□□□□ 0.26
HMGCS2-203ENST00000476640 NOB1Q9ULX3 412 aaKnown RBP16.66■□□□□ 0.26
HMGCS2-203ENST00000476640 RPAP1Q9BWH6 1393 aaPredicted RBP16.65■□□□□ 0.26
HMGCS2-203ENST00000476640 GJA5P36382 358 aa16.65■□□□□ 0.26
HMGCS2-203ENST00000476640 CRHR2Q13324 411 aa16.65■□□□□ 0.26
HMGCS2-203ENST00000476640 VGLL4Q14135 290 aa16.65■□□□□ 0.26
HMGCS2-203ENST00000476640 ARHGEF6Q15052 776 aa16.65■□□□□ 0.26
HMGCS2-203ENST00000476640 ATG9AQ7Z3C6 839 aa16.65■□□□□ 0.26
HMGCS2-203ENST00000476640 SIL1Q9H173 461 aa16.65■□□□□ 0.26
HMGCS2-203ENST00000476640 TRIM17Q9Y577 477 aa16.65■□□□□ 0.26
HMGCS2-203ENST00000476640 SEMA3EO15041 775 aa16.64■□□□□ 0.25
HMGCS2-203ENST00000476640 IL15P40933 162 aaPredicted RBP16.64■□□□□ 0.25
HMGCS2-203ENST00000476640 CACNB3P54284 484 aa16.64■□□□□ 0.25
HMGCS2-203ENST00000476640 APOBEC3HQ6NTF7 200 aaKnown RBP16.64■□□□□ 0.25
HMGCS2-203ENST00000476640 RBBP6Q7Z6E9 1792 aaKnown RBP16.64■□□□□ 0.25
HMGCS2-203ENST00000476640 CCL15-CCL14A0A0B4J2E2 113 aa16.63■□□□□ 0.25
HMGCS2-203ENST00000476640 SP3Q02447 781 aa16.63■□□□□ 0.25
HMGCS2-203ENST00000476640 CCL15Q16663 113 aa16.63■□□□□ 0.25
HMGCS2-203ENST00000476640 INTS3Q68E01 1043 aaKnown RBP16.63■□□□□ 0.25
HMGCS2-203ENST00000476640 OTOP1Q7RTM1 612 aa16.63■□□□□ 0.25
HMGCS2-203ENST00000476640 ERO1BQ86YB8 467 aa16.63■□□□□ 0.25
HMGCS2-203ENST00000476640 CDAN1Q8IWY9 1227 aa16.63■□□□□ 0.25
HMGCS2-203ENST00000476640 ARHGAP45Q92619 1136 aa16.63■□□□□ 0.25
HMGCS2-203ENST00000476640 OTUD5Q96G74 571 aa16.63■□□□□ 0.25
HMGCS2-203ENST00000476640 MS4A4AQ96JQ5 239 aa16.63■□□□□ 0.25
HMGCS2-203ENST00000476640 WRNIP1Q96S55 665 aa16.63■□□□□ 0.25
HMGCS2-203ENST00000476640 ZFYVE28Q9HCC9 887 aa16.63■□□□□ 0.25
HMGCS2-203ENST00000476640 DENND2AQ9ULE3 1009 aa16.63■□□□□ 0.25
HMGCS2-203ENST00000476640 LRRFIP2Q9Y608 721 aaKnown RBP16.63■□□□□ 0.25
HMGCS2-203ENST00000476640 DOCK2Q92608 1830 aa16.62■□□□□ 0.25
HMGCS2-203ENST00000476640 SPDYE5A6NIY4 337 aa16.62■□□□□ 0.25
HMGCS2-203ENST00000476640 LDHBP07195 334 aaKnown RBP16.62■□□□□ 0.25
HMGCS2-203ENST00000476640 GNAI3P08754 354 aa16.62■□□□□ 0.25
HMGCS2-203ENST00000476640 CETPP11597 493 aa16.62■□□□□ 0.25
HMGCS2-203ENST00000476640 TAF1CQ15572 869 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms