RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 CHRNDQ07001 517 aa19.52■□□□□ 0.71
TVP23B-202ENST00000476139 BICD2Q8TD16 824 aa19.52■□□□□ 0.71
TVP23B-202ENST00000476139 C8orf37Q96NL8 207 aa19.52■□□□□ 0.71
TVP23B-202ENST00000476139 NRAPQ86VF7 1730 aa19.52■□□□□ 0.71
TVP23B-202ENST00000476139 HSP90AA2PQ14568 343 aaPredicted RBP19.51■□□□□ 0.71
TVP23B-202ENST00000476139 USP28Q96RU2 1077 aa19.51■□□□□ 0.71
TVP23B-202ENST00000476139 SENP2Q9HC62 589 aa19.51■□□□□ 0.71
TVP23B-202ENST00000476139 CFAP45Q9UL16 551 aa19.51■□□□□ 0.71
TVP23B-202ENST00000476139 RXRAP19793 462 aa19.51■□□□□ 0.71
TVP23B-202ENST00000476139 ERFEQ4G0M1 354 aa19.51■□□□□ 0.71
TVP23B-202ENST00000476139 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.5■□□□□ 0.71
TVP23B-202ENST00000476139 B4E1Z4 1266 aa19.5■□□□□ 0.71
TVP23B-202ENST00000476139 TRDNQ13061 729 aa19.5■□□□□ 0.71
TVP23B-202ENST00000476139 ARMT1Q9H993 441 aa19.5■□□□□ 0.71
TVP23B-202ENST00000476139 MAP3K11Q16584 847 aa19.5■□□□□ 0.71
TVP23B-202ENST00000476139 UVSSAQ2YD98 709 aa19.5■□□□□ 0.71
TVP23B-202ENST00000476139 TNMDQ9H2S6 317 aa19.5■□□□□ 0.71
TVP23B-202ENST00000476139 TAOK2Q9UL54 1235 aa19.5■□□□□ 0.71
TVP23B-202ENST00000476139 AP5Z1O43299 807 aa19.5■□□□□ 0.71
TVP23B-202ENST00000476139 PRKAB2O43741 272 aa19.5■□□□□ 0.71
TVP23B-202ENST00000476139 MBD4O95243 580 aa19.5■□□□□ 0.71
TVP23B-202ENST00000476139 FAM182BQ5T319 152 aa19.5■□□□□ 0.71
TVP23B-202ENST00000476139 NGLY1Q96IV0 654 aa19.5■□□□□ 0.71
TVP23B-202ENST00000476139 EPB41L4AQ9HCS5 686 aaPredicted RBP19.5■□□□□ 0.71
TVP23B-202ENST00000476139 COL4A1P02462 1669 aa19.49■□□□□ 0.71
TVP23B-202ENST00000476139 CCDC192P0DO97 292 aa19.49■□□□□ 0.71
TVP23B-202ENST00000476139 MAP3K12Q12852 859 aa19.49■□□□□ 0.71
TVP23B-202ENST00000476139 SMARCC1Q92922 1105 aaPredicted RBP19.49■□□□□ 0.71
TVP23B-202ENST00000476139 KIF3AQ9Y496 699 aa19.49■□□□□ 0.71
TVP23B-202ENST00000476139 CTDSPL2Q05D32 466 aa19.48■□□□□ 0.71
TVP23B-202ENST00000476139 STK11IPQ8N1F8 1099 aa19.48■□□□□ 0.71
TVP23B-202ENST00000476139 TACC3Q9Y6A5 838 aa19.48■□□□□ 0.71
TVP23B-202ENST00000476139 NEDD4P46934 1319 aa19.48■□□□□ 0.71
TVP23B-202ENST00000476139 KDM4AO75164 1064 aa19.48■□□□□ 0.71
TVP23B-202ENST00000476139 POLR3DP05423 398 aaPredicted RBP19.48■□□□□ 0.71
TVP23B-202ENST00000476139 IFNL3Q8IZI9 196 aa19.48■□□□□ 0.71
TVP23B-202ENST00000476139 ORC3Q9UBD5 711 aaPredicted RBP19.48■□□□□ 0.71
TVP23B-202ENST00000476139 MYH7P12883 1935 aa19.48■□□□□ 0.71
TVP23B-202ENST00000476139 ATRNO75882 1429 aa19.48■□□□□ 0.71
TVP23B-202ENST00000476139 PATL2C9JE40 543 aaKnown RBP19.47■□□□□ 0.71
TVP23B-202ENST00000476139 CPLX1O14810 134 aa19.47■□□□□ 0.71
TVP23B-202ENST00000476139 MIGA1Q8NAN2 632 aa19.47■□□□□ 0.71
TVP23B-202ENST00000476139 RCOR1Q9UKL0 485 aa19.47■□□□□ 0.71
TVP23B-202ENST00000476139 CCDC144CPQ8IYA2 1237 aa19.47■□□□□ 0.71
TVP23B-202ENST00000476139 SPC24Q8NBT2 197 aa19.47■□□□□ 0.71
TVP23B-202ENST00000476139 ZNF652Q9Y2D9 606 aa19.47■□□□□ 0.71
TVP23B-202ENST00000476139 MRVI1Q9Y6F6 885 aa19.47■□□□□ 0.71
TVP23B-202ENST00000476139 LRP5O75197 1615 aa19.47■□□□□ 0.71
TVP23B-202ENST00000476139 TOM1O60784 492 aa19.47■□□□□ 0.71
TVP23B-202ENST00000476139 TPM2P07951 284 aa19.47■□□□□ 0.71
TVP23B-202ENST00000476139 GYG1P46976 350 aa19.47■□□□□ 0.71
TVP23B-202ENST00000476139 TYRO3Q06418 890 aa19.47■□□□□ 0.71
TVP23B-202ENST00000476139 DNTTIP2Q5QJE6 756 aaKnown RBP19.47■□□□□ 0.71
TVP23B-202ENST00000476139 ANGEL1Q9UNK9 670 aaKnown RBP19.47■□□□□ 0.71
TVP23B-202ENST00000476139 LCORLQ8N3X6 602 aa19.46■□□□□ 0.71
TVP23B-202ENST00000476139 CCDC24Q8N4L8 307 aa19.46■□□□□ 0.71
TVP23B-202ENST00000476139 GSG1L2A8MUP6 293 aa19.46■□□□□ 0.71
TVP23B-202ENST00000476139 DHX16O60231 1041 aaKnown RBP19.46■□□□□ 0.71
TVP23B-202ENST00000476139 C8orf76Q96K31 380 aa19.46■□□□□ 0.71
TVP23B-202ENST00000476139 AIFM3Q96NN9 605 aa19.46■□□□□ 0.71
TVP23B-202ENST00000476139 MYL10Q9BUA6 226 aa19.46■□□□□ 0.71
TVP23B-202ENST00000476139 NAPBQ9H115 298 aa19.46■□□□□ 0.71
TVP23B-202ENST00000476139 CLSTN2Q9H4D0 955 aa19.46■□□□□ 0.71
TVP23B-202ENST00000476139 LRP2BPQ9P2M1 347 aa19.46■□□□□ 0.71
TVP23B-202ENST00000476139 TBC1D9BQ66K14 1250 aa19.45■□□□□ 0.7
TVP23B-202ENST00000476139 CLEC4GQ6UXB4 293 aa19.45■□□□□ 0.7
TVP23B-202ENST00000476139 DDX19AQ9NUU7 478 aaKnown RBP19.45■□□□□ 0.7
TVP23B-202ENST00000476139 ZSWIM5Q9P217 1185 aa19.45■□□□□ 0.7
TVP23B-202ENST00000476139 ADGRA1Q86SQ6 560 aa19.45■□□□□ 0.7
TVP23B-202ENST00000476139 LUZP1Q86V48 1076 aa19.45■□□□□ 0.7
TVP23B-202ENST00000476139 IGDCC4Q8TDY8 1250 aa19.45■□□□□ 0.7
TVP23B-202ENST00000476139 GOLPH3LQ9H4A5 285 aa19.45■□□□□ 0.7
TVP23B-202ENST00000476139 ABCF2Q9UG63 623 aa19.45■□□□□ 0.7
TVP23B-202ENST00000476139 PRKCSHP14314 528 aaPredicted RBP19.44■□□□□ 0.7
TVP23B-202ENST00000476139 CDC27P30260 824 aa19.44■□□□□ 0.7
TVP23B-202ENST00000476139 CCAR1Q8IX12 1150 aaKnown RBP19.44■□□□□ 0.7
TVP23B-202ENST00000476139 FBXO18Q8NFZ0 1043 aa19.44■□□□□ 0.7
TVP23B-202ENST00000476139 DDX60Q8IY21 1712 aaKnown RBP19.44■□□□□ 0.7
TVP23B-202ENST00000476139 SH2B2O14492 632 aaPredicted RBP19.44■□□□□ 0.7
TVP23B-202ENST00000476139 GTF2E1P29083 439 aaPredicted RBP19.44■□□□□ 0.7
TVP23B-202ENST00000476139 MICU3Q86XE3 530 aa19.44■□□□□ 0.7
TVP23B-202ENST00000476139 SRP68Q9UHB9 627 aaKnown RBP19.44■□□□□ 0.7
TVP23B-202ENST00000476139 KIAA2012Q0VF49 1180 aa19.44■□□□□ 0.7
TVP23B-202ENST00000476139 PHKBQ93100 1093 aa19.44■□□□□ 0.7
TVP23B-202ENST00000476139 BCL2L12Q9HB09 334 aa19.44■□□□□ 0.7
TVP23B-202ENST00000476139 FAM13BQ9NYF5 915 aa19.44■□□□□ 0.7
TVP23B-202ENST00000476139 UQCRHLA0A096LP55 91 aa19.43■□□□□ 0.7
TVP23B-202ENST00000476139 UQCRHP07919 91 aa19.43■□□□□ 0.7
TVP23B-202ENST00000476139 ME1P48163 572 aa19.43■□□□□ 0.7
TVP23B-202ENST00000476139 ANO6Q4KMQ2 910 aa19.43■□□□□ 0.7
TVP23B-202ENST00000476139 APOA5Q6Q788 366 aa19.43■□□□□ 0.7
TVP23B-202ENST00000476139 ANKRD18AQ8IVF6 992 aa19.43■□□□□ 0.7
TVP23B-202ENST00000476139 CELF1Q92879 486 aaKnown RBP19.43■□□□□ 0.7
TVP23B-202ENST00000476139 CDC5LQ99459 802 aaKnown RBP19.43■□□□□ 0.7
TVP23B-202ENST00000476139 SLC4A4Q9Y6R1 1079 aa19.43■□□□□ 0.7
TVP23B-202ENST00000476139 RTL9Q8NET4 1388 aa19.43■□□□□ 0.7
TVP23B-202ENST00000476139 WDR19Q8NEZ3 1342 aa19.43■□□□□ 0.7
TVP23B-202ENST00000476139 UBE2Q2LH0YL09 131 aa19.43■□□□□ 0.7
TVP23B-202ENST00000476139 METAP2P50579 478 aaKnown RBP eCLIP19.43■□□□□ 0.7
TVP23B-202ENST00000476139 CHMP4CQ96CF2 233 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms