RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 PSEN2P49810 448 aa13.44□□□□□ -0.26
CALD1-217ENST00000475772 CTSWP56202 376 aa13.44□□□□□ -0.26
CALD1-217ENST00000475772 CWF19L2Q2TBE0 894 aaKnown RBP13.44□□□□□ -0.26
CALD1-217ENST00000475772 NBPF9Q3BBW0 867 aa13.44□□□□□ -0.26
CALD1-217ENST00000475772 C6orf132Q5T0Z8 1188 aa13.44□□□□□ -0.26
CALD1-217ENST00000475772 PRAMEF18Q5VWM3 479 aa13.44□□□□□ -0.26
CALD1-217ENST00000475772 USP17L1Q7RTZ2 530 aa13.44□□□□□ -0.26
CALD1-217ENST00000475772 RASAL3Q86YV0 1011 aa13.44□□□□□ -0.26
CALD1-217ENST00000475772 BSDC1Q9NW68 430 aaPredicted RBP13.44□□□□□ -0.26
CALD1-217ENST00000475772 DDX58O95786 925 aaKnown RBP13.43□□□□□ -0.26
CALD1-217ENST00000475772 PTPREP23469 700 aa13.43□□□□□ -0.26
CALD1-217ENST00000475772 CALD1Q05682 793 aaKnown RBP13.43□□□□□ -0.26
CALD1-217ENST00000475772 DACT2Q5SW24 774 aa13.43□□□□□ -0.26
CALD1-217ENST00000475772 TSR2Q969E8 191 aaKnown RBP13.43□□□□□ -0.26
CALD1-217ENST00000475772 PITPNM2Q9BZ72 1349 aa13.42□□□□□ -0.26
CALD1-217ENST00000475772 NEURL1BA8MQ27 555 aa13.42□□□□□ -0.26
CALD1-217ENST00000475772 CCT4P50991 539 aaKnown RBP13.42□□□□□ -0.26
CALD1-217ENST00000475772 CASP7P55210 303 aa13.42□□□□□ -0.26
CALD1-217ENST00000475772 KCNK17Q96T54 332 aa13.42□□□□□ -0.26
CALD1-217ENST00000475772 CDC5LQ99459 802 aaKnown RBP13.42□□□□□ -0.26
CALD1-217ENST00000475772 MED23Q9ULK4 1368 aa13.42□□□□□ -0.26
CALD1-217ENST00000475772 PAPPA2Q9BXP8 1791 aa13.41□□□□□ -0.26
CALD1-217ENST00000475772 UBE2Q2LH0YL09 131 aa13.41□□□□□ -0.26
CALD1-217ENST00000475772 WNT10BO00744 389 aa13.41□□□□□ -0.26
CALD1-217ENST00000475772 MAP3K7O43318 606 aa13.41□□□□□ -0.26
CALD1-217ENST00000475772 KLRK1P26718 216 aa13.41□□□□□ -0.26
CALD1-217ENST00000475772 TSR1Q2NL82 804 aaKnown RBP13.41□□□□□ -0.26
CALD1-217ENST00000475772 SMYD5Q6GMV2 418 aa13.41□□□□□ -0.26
CALD1-217ENST00000475772 CACNA1FO60840 1977 aa13.4□□□□□ -0.26
CALD1-217ENST00000475772 CSF1RP07333 972 aa13.4□□□□□ -0.26
CALD1-217ENST00000475772 FKBP1BP68106 108 aa13.4□□□□□ -0.26
CALD1-217ENST00000475772 DMRTA1Q5VZB9 504 aa13.4□□□□□ -0.26
CALD1-217ENST00000475772 PLA2G12BQ9BX93 195 aa13.4□□□□□ -0.26
CALD1-217ENST00000475772 LSM11P83369 360 aaKnown RBP eCLIP13.39□□□□□ -0.27
CALD1-217ENST00000475772 STRIP1Q5VSL9 837 aa13.39□□□□□ -0.27
CALD1-217ENST00000475772 WWC1Q8IX03 1113 aa13.39□□□□□ -0.27
CALD1-217ENST00000475772 ZBED3Q96IU2 234 aaPredicted RBP13.39□□□□□ -0.27
CALD1-217ENST00000475772 COA1Q9GZY4 146 aa13.39□□□□□ -0.27
CALD1-217ENST00000475772 LEMD3Q9Y2U8 911 aa13.39□□□□□ -0.27
CALD1-217ENST00000475772 IRS2Q9Y4H2 1338 aa13.39□□□□□ -0.27
CALD1-217ENST00000475772 SNAP23O00161 211 aa13.38□□□□□ -0.27
CALD1-217ENST00000475772 COL9A1P20849 921 aa13.38□□□□□ -0.27
CALD1-217ENST00000475772 TM4SF4P48230 202 aa13.38□□□□□ -0.27
CALD1-217ENST00000475772 GCKRQ14397 625 aa13.38□□□□□ -0.27
CALD1-217ENST00000475772 CCDC27Q2M243 656 aa13.38□□□□□ -0.27
CALD1-217ENST00000475772 TWISTNBQ3B726 338 aaPredicted RBP13.38□□□□□ -0.27
CALD1-217ENST00000475772 UBE3BQ7Z3V4 1068 aa13.38□□□□□ -0.27
CALD1-217ENST00000475772 CTU1Q7Z7A3 348 aaKnown RBP13.38□□□□□ -0.27
CALD1-217ENST00000475772 CHMP4AQ9BY43 222 aa13.38□□□□□ -0.27
CALD1-217ENST00000475772 TBC1D8O95759 1140 aa13.37□□□□□ -0.27
CALD1-217ENST00000475772 ITGA6P23229 1130 aa13.37□□□□□ -0.27
CALD1-217ENST00000475772 SOX10P56693 466 aa13.37□□□□□ -0.27
CALD1-217ENST00000475772 NEXNQ0ZGT2 675 aa13.37□□□□□ -0.27
CALD1-217ENST00000475772 TTLL5Q6EMB2 1281 aa13.37□□□□□ -0.27
CALD1-217ENST00000475772 ZNF804BA4D1E1 1349 aa13.37□□□□□ -0.27
CALD1-217ENST00000475772 PPP1R3GB7ZBB8 358 aa13.36□□□□□ -0.27
CALD1-217ENST00000475772 VAMP4O75379 141 aa13.36□□□□□ -0.27
CALD1-217ENST00000475772 SASH1O94885 1247 aa13.36□□□□□ -0.27
CALD1-217ENST00000475772 IGHMBP2P38935 993 aaKnown RBP13.36□□□□□ -0.27
CALD1-217ENST00000475772 PTPN12Q05209 780 aaKnown RBP13.36□□□□□ -0.27
CALD1-217ENST00000475772 ZNF296Q8WUU4 475 aaPredicted RBP13.36□□□□□ -0.27
CALD1-217ENST00000475772 STK31Q9BXU1 1019 aa13.36□□□□□ -0.27
CALD1-217ENST00000475772 R3HDMLQ9H3Y0 253 aa13.36□□□□□ -0.27
CALD1-217ENST00000475772 CD209Q9NNX6 404 aa13.36□□□□□ -0.27
CALD1-217ENST00000475772 FZD1Q9UP38 647 aa13.36□□□□□ -0.27
CALD1-217ENST00000475772 PCDHAC2Q9Y5I4 1007 aa13.36□□□□□ -0.27
CALD1-217ENST00000475772 GTF2IP78347 998 aa13.35□□□□□ -0.27
CALD1-217ENST00000475772 CHRNDQ07001 517 aa13.35□□□□□ -0.27
CALD1-217ENST00000475772 FLIIQ13045 1269 aa13.35□□□□□ -0.27
CALD1-217ENST00000475772 LDLRAD1Q5T700 205 aa13.35□□□□□ -0.27
CALD1-217ENST00000475772 KIAA0825Q8IV33 1275 aa13.35□□□□□ -0.27
CALD1-217ENST00000475772 OGFOD1Q8N543 542 aa13.35□□□□□ -0.27
CALD1-217ENST00000475772 CERS5Q8N5B7 392 aa13.35□□□□□ -0.27
CALD1-217ENST00000475772 CDHR5Q9HBB8 845 aa13.35□□□□□ -0.27
CALD1-217ENST00000475772 MYO3BQ8WXR4 1341 aa13.35□□□□□ -0.27
CALD1-217ENST00000475772 A0A1B0GUL6 1792 aa13.35□□□□□ -0.27
CALD1-217ENST00000475772 TAF5LO75529 589 aa13.34□□□□□ -0.27
CALD1-217ENST00000475772 FOXO4P98177 505 aa13.34□□□□□ -0.27
CALD1-217ENST00000475772 DNAAF4Q8WXU2 420 aa13.34□□□□□ -0.27
CALD1-217ENST00000475772 ZBED2Q9BTP6 218 aa13.34□□□□□ -0.27
CALD1-217ENST00000475772 ANKRD2Q9GZV1 360 aa13.34□□□□□ -0.27
CALD1-217ENST00000475772 HPS5Q9UPZ3 1129 aa13.34□□□□□ -0.27
CALD1-217ENST00000475772 GPR25O00155 361 aa13.33□□□□□ -0.28
CALD1-217ENST00000475772 MMP14P50281 582 aa13.33□□□□□ -0.28
CALD1-217ENST00000475772 PRKG1Q13976 671 aa13.33□□□□□ -0.28
CALD1-217ENST00000475772 TTLL12Q14166 644 aaPredicted RBP13.33□□□□□ -0.28
CALD1-217ENST00000475772 C15orf52Q6ZUT6 534 aaKnown RBP13.33□□□□□ -0.28
CALD1-217ENST00000475772 HELBQ8NG08 1087 aaPredicted RBP13.33□□□□□ -0.28
CALD1-217ENST00000475772 LINS1Q8NG48 757 aa13.33□□□□□ -0.28
CALD1-217ENST00000475772 MPHOSPH8Q99549 860 aa13.33□□□□□ -0.28
CALD1-217ENST00000475772 SLC4A5Q9BY07 1137 aa13.33□□□□□ -0.28
CALD1-217ENST00000475772 NPDC1Q9NQX5 325 aaPredicted RBP13.33□□□□□ -0.28
CALD1-217ENST00000475772 AOX1Q06278 1338 aa13.33□□□□□ -0.28
CALD1-217ENST00000475772 IL16Q14005 1332 aa13.33□□□□□ -0.28
CALD1-217ENST00000475772 ECM29Q5VYK3 1845 aa13.32□□□□□ -0.28
CALD1-217ENST00000475772 EPHA10Q5JZY3 1008 aa13.32□□□□□ -0.28
CALD1-217ENST00000475772 CFHR5Q9BXR6 569 aa13.32□□□□□ -0.28
CALD1-217ENST00000475772 CENPFP49454 3210 aa13.32□□□□□ -0.28
CALD1-217ENST00000475772 MKI67P46013 3256 aaKnown RBP13.31□□□□□ -0.28
CALD1-217ENST00000475772 F6X3S4 739 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms