RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CERS5Q8N5B7 392 aa21.7■■□□□ 1.06
ATG4B-217ENST00000475693 MAP4K1Q92918 833 aa21.7■■□□□ 1.06
ATG4B-217ENST00000475693 PRKAB2O43741 272 aa21.7■■□□□ 1.06
ATG4B-217ENST00000475693 HSPD1P10809 573 aaKnown RBP21.7■■□□□ 1.06
ATG4B-217ENST00000475693 ZSCAN25Q6NSZ9 544 aa21.7■■□□□ 1.06
ATG4B-217ENST00000475693 DOCK2Q92608 1830 aa21.69■■□□□ 1.06
ATG4B-217ENST00000475693 MBD4O95243 580 aa21.69■■□□□ 1.06
ATG4B-217ENST00000475693 NAA16Q6N069 864 aaPredicted RBP21.69■■□□□ 1.06
ATG4B-217ENST00000475693 LCORLQ8N3X6 602 aa21.69■■□□□ 1.06
ATG4B-217ENST00000475693 YDJCA8MPS7 323 aa21.68■■□□□ 1.06
ATG4B-217ENST00000475693 KIAA2012Q0VF49 1180 aa21.68■■□□□ 1.06
ATG4B-217ENST00000475693 CC2D2BQ6DHV5 1058 aa21.68■■□□□ 1.06
ATG4B-217ENST00000475693 RTKN2Q8IZC4 609 aa21.68■■□□□ 1.06
ATG4B-217ENST00000475693 WDR66Q8TBY9 1149 aa21.68■■□□□ 1.06
ATG4B-217ENST00000475693 COL4A5P29400 1685 aa21.68■■□□□ 1.06
ATG4B-217ENST00000475693 LDHBP07195 334 aaKnown RBP21.68■■□□□ 1.06
ATG4B-217ENST00000475693 HSPA4P34932 840 aa21.68■■□□□ 1.06
ATG4B-217ENST00000475693 BRCA1P38398 1863 aaKnown RBP21.67■■□□□ 1.06
ATG4B-217ENST00000475693 NFKBIEO00221 500 aa21.67■■□□□ 1.06
ATG4B-217ENST00000475693 LRRFIP1Q32MZ4 808 aaKnown RBP21.67■■□□□ 1.06
ATG4B-217ENST00000475693 AIDAQ96BJ3 306 aa21.67■■□□□ 1.06
ATG4B-217ENST00000475693 RASSF7Q02833 373 aa21.67■■□□□ 1.06
ATG4B-217ENST00000475693 NECTIN1Q15223 517 aa21.67■■□□□ 1.06
ATG4B-217ENST00000475693 SCN9AQ15858 1988 aa21.66■■□□□ 1.06
ATG4B-217ENST00000475693 CPA1P15085 419 aa21.66■■□□□ 1.06
ATG4B-217ENST00000475693 DZIP1Q86YF9 867 aaKnown RBP21.66■■□□□ 1.06
ATG4B-217ENST00000475693 LARGE2Q8N3Y3 721 aa21.66■■□□□ 1.06
ATG4B-217ENST00000475693 STRBPQ96SI9 672 aaKnown RBP21.66■■□□□ 1.06
ATG4B-217ENST00000475693 SYT17Q9BSW7 474 aa21.66■■□□□ 1.06
ATG4B-217ENST00000475693 AATFQ9NY61 560 aaKnown RBP eCLIP21.66■■□□□ 1.06
ATG4B-217ENST00000475693 PDS5AQ29RF7 1337 aaKnown RBP21.66■■□□□ 1.06
ATG4B-217ENST00000475693 CD2BP2O95400 341 aaKnown RBP21.65■■□□□ 1.06
ATG4B-217ENST00000475693 PRELPP51888 382 aa21.65■■□□□ 1.06
ATG4B-217ENST00000475693 ADCK5Q3MIX3 580 aa21.65■■□□□ 1.06
ATG4B-217ENST00000475693 SNX14Q9Y5W7 946 aa21.65■■□□□ 1.06
ATG4B-217ENST00000475693 CREB3L3Q68CJ9 461 aa21.65■■□□□ 1.06
ATG4B-217ENST00000475693 PSMD1Q99460 953 aa21.65■■□□□ 1.06
ATG4B-217ENST00000475693 RAD17O75943 681 aa21.64■■□□□ 1.06
ATG4B-217ENST00000475693 APPP05067 770 aa21.64■■□□□ 1.06
ATG4B-217ENST00000475693 SCNN1DP51172 638 aa21.64■■□□□ 1.06
ATG4B-217ENST00000475693 FAM205AQ6ZU69 1335 aa21.64■■□□□ 1.06
ATG4B-217ENST00000475693 SLC27A2O14975 620 aa21.64■■□□□ 1.05
ATG4B-217ENST00000475693 HAND2P61296 217 aa21.64■■□□□ 1.05
ATG4B-217ENST00000475693 PODNQ7Z5L7 613 aa21.64■■□□□ 1.05
ATG4B-217ENST00000475693 SDR42E1Q8WUS8 393 aa21.64■■□□□ 1.05
ATG4B-217ENST00000475693 UPF3BQ9BZI7 483 aaKnown RBP21.64■■□□□ 1.05
ATG4B-217ENST00000475693 SALL1Q9NSC2 1324 aa21.64■■□□□ 1.05
ATG4B-217ENST00000475693 SMIM22K7EJ46 135 aa21.63■■□□□ 1.05
ATG4B-217ENST00000475693 FGAP02671 866 aa21.63■■□□□ 1.05
ATG4B-217ENST00000475693 SUPT20HQ8NEM7 779 aa21.63■■□□□ 1.05
ATG4B-217ENST00000475693 RIOK1Q9BRS2 568 aaKnown RBP21.63■■□□□ 1.05
ATG4B-217ENST00000475693 PCDHAC2Q9Y5I4 1007 aa21.63■■□□□ 1.05
ATG4B-217ENST00000475693 MAGEB6P1A0A0J9YX57 407 aa21.63■■□□□ 1.05
ATG4B-217ENST00000475693 CYP21A2P08686 494 aa21.62■■□□□ 1.05
ATG4B-217ENST00000475693 KIAA0825Q8IV33 1275 aa21.62■■□□□ 1.05
ATG4B-217ENST00000475693 TAOK3Q9H2K8 898 aa21.62■■□□□ 1.05
ATG4B-217ENST00000475693 MCCP23508 829 aa21.61■■□□□ 1.05
ATG4B-217ENST00000475693 SPTY2D1Q68D10 685 aaPredicted RBP21.61■■□□□ 1.05
ATG4B-217ENST00000475693 EPB41L4AQ9HCS5 686 aaPredicted RBP21.61■■□□□ 1.05
ATG4B-217ENST00000475693 SLC4A4Q9Y6R1 1079 aa21.61■■□□□ 1.05
ATG4B-217ENST00000475693 IARSP41252 1262 aaKnown RBP21.61■■□□□ 1.05
ATG4B-217ENST00000475693 DACT2Q5SW24 774 aa21.61■■□□□ 1.05
ATG4B-217ENST00000475693 TICAM2Q86XR7 235 aa21.61■■□□□ 1.05
ATG4B-217ENST00000475693 STK11IPQ8N1F8 1099 aa21.61■■□□□ 1.05
ATG4B-217ENST00000475693 ZGPATQ8N5A5 531 aaKnown RBP21.61■■□□□ 1.05
ATG4B-217ENST00000475693 GSG1L2A8MUP6 293 aa21.6■■□□□ 1.05
ATG4B-217ENST00000475693 EVX2Q03828 476 aa21.6■■□□□ 1.05
ATG4B-217ENST00000475693 DSCC1Q9BVC3 393 aa21.6■■□□□ 1.05
ATG4B-217ENST00000475693 TTF2Q9UNY4 1162 aaKnown RBP21.6■■□□□ 1.05
ATG4B-217ENST00000475693 EIF5BO60841 1220 aaKnown RBP21.6■■□□□ 1.05
ATG4B-217ENST00000475693 SLC4A8Q2Y0W8 1093 aa21.6■■□□□ 1.05
ATG4B-217ENST00000475693 INCENPQ9NQS7 918 aa21.6■■□□□ 1.05
ATG4B-217ENST00000475693 ZBTB12Q9Y330 459 aaPredicted RBP21.6■■□□□ 1.05
ATG4B-217ENST00000475693 USP17L3A6NCW0 530 aa21.59■■□□□ 1.05
ATG4B-217ENST00000475693 USP17L4A6NCW7 530 aa21.59■■□□□ 1.05
ATG4B-217ENST00000475693 SOGA3Q5TF21 947 aa21.59■■□□□ 1.05
ATG4B-217ENST00000475693 USP17L1Q7RTZ2 530 aa21.59■■□□□ 1.05
ATG4B-217ENST00000475693 LARP6Q9BRS8 491 aaKnown RBP21.59■■□□□ 1.05
ATG4B-217ENST00000475693 ARHGAP27Q6ZUM4 889 aa21.59■■□□□ 1.05
ATG4B-217ENST00000475693 TBC1D22AQ8WUA7 517 aa21.59■■□□□ 1.05
ATG4B-217ENST00000475693 TCEANC2Q96MN5 208 aa21.59■■□□□ 1.05
ATG4B-217ENST00000475693 ZBTB22O15209 634 aa21.58■■□□□ 1.05
ATG4B-217ENST00000475693 STRIP1Q5VSL9 837 aa21.58■■□□□ 1.05
ATG4B-217ENST00000475693 STOX1Q6ZVD7 989 aa21.58■■□□□ 1.05
ATG4B-217ENST00000475693 IFNL3Q8IZI9 196 aa21.58■■□□□ 1.05
ATG4B-217ENST00000475693 SH3RF3Q8TEJ3 882 aaPredicted RBP21.58■■□□□ 1.05
ATG4B-217ENST00000475693 U3KPZ7 1027 aaPredicted RBP21.58■■□□□ 1.05
ATG4B-217ENST00000475693 PATL2C9JE40 543 aaKnown RBP21.57■■□□□ 1.04
ATG4B-217ENST00000475693 PSMD14O00487 310 aa21.57■■□□□ 1.04
ATG4B-217ENST00000475693 YBX3P16989 372 aaKnown RBP eCLIP21.57■■□□□ 1.04
ATG4B-217ENST00000475693 NEK4P51957 841 aa21.57■■□□□ 1.04
ATG4B-217ENST00000475693 NOL8Q76FK4 1167 aaKnown RBP21.57■■□□□ 1.04
ATG4B-217ENST00000475693 NKX2-3Q8TAU0 364 aa21.57■■□□□ 1.04
ATG4B-217ENST00000475693 JAKMIP1Q96N16 626 aaKnown RBP21.57■■□□□ 1.04
ATG4B-217ENST00000475693 FER1L6Q2WGJ9 1857 aa21.57■■□□□ 1.04
ATG4B-217ENST00000475693 CYP2D7A0A087X1C5 515 aa21.57■■□□□ 1.04
ATG4B-217ENST00000475693 GRIPAP1Q4V328 841 aa21.57■■□□□ 1.04
ATG4B-217ENST00000475693 TBC1D2Q9BYX2 928 aa21.57■■□□□ 1.04
ATG4B-217ENST00000475693 DAXXQ9UER7 740 aaPredicted RBP21.57■■□□□ 1.04
ATG4B-217ENST00000475693 CCDC88AQ3V6T2 1871 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms