RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 CDK5RAP2Q96SN8 1893 aa16.37■□□□□ 0.21
TRAF4-210ENST00000475329 BAZ2AQ9UIF9 1905 aaKnown RBP16.37■□□□□ 0.21
TRAF4-210ENST00000475329 FOXP2O15409 715 aa16.37■□□□□ 0.21
TRAF4-210ENST00000475329 CYP21A2P08686 494 aa16.37■□□□□ 0.21
TRAF4-210ENST00000475329 GNAT2P19087 354 aa16.37■□□□□ 0.21
TRAF4-210ENST00000475329 ADCK5Q3MIX3 580 aa16.37■□□□□ 0.21
TRAF4-210ENST00000475329 CC2D2BQ6DHV5 1058 aa16.37■□□□□ 0.21
TRAF4-210ENST00000475329 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
TRAF4-210ENST00000475329 STRBPQ96SI9 672 aaKnown RBP16.37■□□□□ 0.21
TRAF4-210ENST00000475329 COA1Q9GZY4 146 aa16.37■□□□□ 0.21
TRAF4-210ENST00000475329 ZMYM6O95789 1325 aa16.37■□□□□ 0.21
TRAF4-210ENST00000475329 NAV1Q8NEY1 1877 aa16.36■□□□□ 0.21
TRAF4-210ENST00000475329 HSP90AA1P07900 732 aaKnown RBP16.36■□□□□ 0.21
TRAF4-210ENST00000475329 MECOMQ03112 1051 aa16.36■□□□□ 0.21
TRAF4-210ENST00000475329 R3HDM1Q15032 1099 aaKnown RBP16.36■□□□□ 0.21
TRAF4-210ENST00000475329 IMMTQ16891 758 aaKnown RBP16.36■□□□□ 0.21
TRAF4-210ENST00000475329 BLOC1S2Q6QNY1 142 aa16.36■□□□□ 0.21
TRAF4-210ENST00000475329 RUFY3Q7L099 469 aa16.36■□□□□ 0.21
TRAF4-210ENST00000475329 DZIP1Q86YF9 867 aaKnown RBP16.36■□□□□ 0.21
TRAF4-210ENST00000475329 TTC14Q96N46 770 aa16.36■□□□□ 0.21
TRAF4-210ENST00000475329 ZC3H12CQ9C0D7 883 aaKnown RBP16.36■□□□□ 0.21
TRAF4-210ENST00000475329 ARMT1Q9H993 441 aa16.36■□□□□ 0.21
TRAF4-210ENST00000475329 MAGEB6P1A0A0J9YX57 407 aa16.35■□□□□ 0.21
TRAF4-210ENST00000475329 RIMBP2O15034 1052 aa16.35■□□□□ 0.21
TRAF4-210ENST00000475329 LDHBP07195 334 aaKnown RBP16.35■□□□□ 0.21
TRAF4-210ENST00000475329 PRDX5P30044 214 aa16.35■□□□□ 0.21
TRAF4-210ENST00000475329 ALX1Q15699 326 aa16.35■□□□□ 0.21
TRAF4-210ENST00000475329 LCORLQ8N3X6 602 aa16.35■□□□□ 0.21
TRAF4-210ENST00000475329 NSUN4Q96CB9 384 aaKnown RBP16.35■□□□□ 0.21
TRAF4-210ENST00000475329 SLKQ9H2G2 1235 aaPredicted RBP16.35■□□□□ 0.21
TRAF4-210ENST00000475329 PDRG1Q9NUG6 133 aa16.35■□□□□ 0.21
TRAF4-210ENST00000475329 JAG2Q9Y219 1238 aa16.35■□□□□ 0.21
TRAF4-210ENST00000475329 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
TRAF4-210ENST00000475329 TAF6LQ9Y6J9 622 aa16.35■□□□□ 0.21
TRAF4-210ENST00000475329 SNED1Q8TER0 1413 aa16.35■□□□□ 0.21
TRAF4-210ENST00000475329 FOCADQ5VW36 1801 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 PATL2C9JE40 543 aaKnown RBP16.34■□□□□ 0.21
TRAF4-210ENST00000475329 FGAP02671 866 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 APPP05067 770 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 RPS6KB1P23443 525 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 GSTO1P78417 241 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 GRIPAP1Q4V328 841 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 TTLL5Q6EMB2 1281 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 ADGRA1Q86SQ6 560 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 TTLL6Q8N841 843 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 SPRYD3Q8NCJ5 442 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 TBC1D22AQ8WUA7 517 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 C7orf43Q8WVR3 580 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 NEK1Q96PY6 1258 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 ZNF219Q9P2Y4 722 aaPredicted RBP16.34■□□□□ 0.21
TRAF4-210ENST00000475329 FAM205AQ6ZU69 1335 aa16.34■□□□□ 0.21
TRAF4-210ENST00000475329 SCN9AQ15858 1988 aa16.33■□□□□ 0.21
TRAF4-210ENST00000475329 PSDA5PKW4 1024 aaPredicted RBP16.33■□□□□ 0.2
TRAF4-210ENST00000475329 G3V3G9 751 aa16.33■□□□□ 0.2
TRAF4-210ENST00000475329 HMGB1P09429 215 aaKnown RBP16.33■□□□□ 0.2
TRAF4-210ENST00000475329 CPA1P15085 419 aa16.33■□□□□ 0.2
TRAF4-210ENST00000475329 DPEP1P16444 411 aa16.33■□□□□ 0.2
TRAF4-210ENST00000475329 DCAF8Q5TAQ9 597 aa16.33■□□□□ 0.2
TRAF4-210ENST00000475329 SUPT20HQ8NEM7 779 aa16.33■□□□□ 0.2
TRAF4-210ENST00000475329 ZNF384Q8TF68 577 aa16.33■□□□□ 0.2
TRAF4-210ENST00000475329 RTFDC1Q9BY42 306 aaPredicted RBP16.33■□□□□ 0.2
TRAF4-210ENST00000475329 NACAP1Q9BZK3 213 aa16.33■□□□□ 0.2
TRAF4-210ENST00000475329 SLC4A4Q9Y6R1 1079 aa16.33■□□□□ 0.2
TRAF4-210ENST00000475329 E7EWF7 191 aa16.32■□□□□ 0.2
TRAF4-210ENST00000475329 ZNF213O14771 459 aa16.32■□□□□ 0.2
TRAF4-210ENST00000475329 AK2P54819 239 aa16.32■□□□□ 0.2
TRAF4-210ENST00000475329 TGFB2P61812 414 aa16.32■□□□□ 0.2
TRAF4-210ENST00000475329 ECM29Q5VYK3 1845 aa16.32■□□□□ 0.2
TRAF4-210ENST00000475329 STOX1Q6ZVD7 989 aa16.32■□□□□ 0.2
TRAF4-210ENST00000475329 NOL8Q76FK4 1167 aaKnown RBP16.32■□□□□ 0.2
TRAF4-210ENST00000475329 TMX3Q96JJ7 454 aa16.32■□□□□ 0.2
TRAF4-210ENST00000475329 RIOK1Q9BRS2 568 aaKnown RBP16.32■□□□□ 0.2
TRAF4-210ENST00000475329 NAPBQ9H115 298 aa16.32■□□□□ 0.2
TRAF4-210ENST00000475329 EPB41L4AQ9HCS5 686 aaPredicted RBP16.32■□□□□ 0.2
TRAF4-210ENST00000475329 FER1L6Q2WGJ9 1857 aa16.31■□□□□ 0.2
TRAF4-210ENST00000475329 A0A0G2JLW4 131 aa16.31■□□□□ 0.2
TRAF4-210ENST00000475329 GSG1L2A8MUP6 293 aa16.31■□□□□ 0.2
TRAF4-210ENST00000475329 TDO2P48775 406 aa16.31■□□□□ 0.2
TRAF4-210ENST00000475329 HAND2P61296 217 aa16.31■□□□□ 0.2
TRAF4-210ENST00000475329 ANKRD1Q15327 319 aa16.31■□□□□ 0.2
TRAF4-210ENST00000475329 CCDC93Q567U6 631 aa16.31■□□□□ 0.2
TRAF4-210ENST00000475329 IFNL3Q8IZI9 196 aa16.31■□□□□ 0.2
TRAF4-210ENST00000475329 ALDH8A1Q9H2A2 487 aaPredicted RBP16.31■□□□□ 0.2
TRAF4-210ENST00000475329 LIMCH1Q9UPQ0 1083 aa16.31■□□□□ 0.2
TRAF4-210ENST00000475329 PRKAB2O43741 272 aa16.3■□□□□ 0.2
TRAF4-210ENST00000475329 LDHCP07864 332 aa16.3■□□□□ 0.2
TRAF4-210ENST00000475329 DYNLL1P63167 89 aaKnown RBP16.3■□□□□ 0.2
TRAF4-210ENST00000475329 GTF2IP78347 998 aa16.3■□□□□ 0.2
TRAF4-210ENST00000475329 DOK7Q18PE1 504 aa16.3■□□□□ 0.2
TRAF4-210ENST00000475329 MFSD14BQ5SR56 506 aa16.3■□□□□ 0.2
TRAF4-210ENST00000475329 NOL10Q9BSC4 688 aaKnown RBP16.3■□□□□ 0.2
TRAF4-210ENST00000475329 CRNKL1Q9BZJ0 848 aaKnown RBP16.3■□□□□ 0.2
TRAF4-210ENST00000475329 ARFGEF1Q9Y6D6 1849 aa16.3■□□□□ 0.2
TRAF4-210ENST00000475329 ADAMTSL1Q8N6G6 1762 aa16.3■□□□□ 0.2
TRAF4-210ENST00000475329 MROH7-TTC4A0A0A0MT08 1334 aa16.29■□□□□ 0.2
TRAF4-210ENST00000475329 DDX60LQ5H9U9 1706 aaKnown RBP16.29■□□□□ 0.2
TRAF4-210ENST00000475329 C21orf2O43822 256 aa16.29■□□□□ 0.2
TRAF4-210ENST00000475329 KCNA3P22001 575 aa16.29■□□□□ 0.2
TRAF4-210ENST00000475329 CUL4AQ13619 759 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms