RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 ALDH1B1P30837 517 aa12.15□□□□□ -0.46
PCCB-213ENST00000475214 CUL4AQ13619 759 aa12.15□□□□□ -0.46
PCCB-213ENST00000475214 NFKBIBQ15653 356 aa12.15□□□□□ -0.46
PCCB-213ENST00000475214 IMMTQ16891 758 aaKnown RBP12.15□□□□□ -0.46
PCCB-213ENST00000475214 C15orf52Q6ZUT6 534 aaKnown RBP12.15□□□□□ -0.46
PCCB-213ENST00000475214 TTLL6Q8N841 843 aa12.15□□□□□ -0.46
PCCB-213ENST00000475214 INTS4Q96HW7 963 aaKnown RBP12.15□□□□□ -0.46
PCCB-213ENST00000475214 ALDH8A1Q9H2A2 487 aaPredicted RBP12.15□□□□□ -0.46
PCCB-213ENST00000475214 ABCF2Q9UG63 623 aa12.15□□□□□ -0.46
PCCB-213ENST00000475214 IGSF3O75054 1194 aa12.14□□□□□ -0.47
PCCB-213ENST00000475214 CPA1P15085 419 aa12.14□□□□□ -0.47
PCCB-213ENST00000475214 GPSM2P81274 684 aa12.14□□□□□ -0.47
PCCB-213ENST00000475214 C9orf131Q5VYM1 1079 aa12.14□□□□□ -0.47
PCCB-213ENST00000475214 ZNF804AQ7Z570 1209 aa12.14□□□□□ -0.47
PCCB-213ENST00000475214 SP8Q8IXZ3 490 aa12.14□□□□□ -0.47
PCCB-213ENST00000475214 TMX4Q9H1E5 349 aaPredicted RBP12.14□□□□□ -0.47
PCCB-213ENST00000475214 SH2B1Q9NRF2 756 aaPredicted RBP12.14□□□□□ -0.47
PCCB-213ENST00000475214 RAI14Q9P0K7 980 aa12.14□□□□□ -0.47
PCCB-213ENST00000475214 GGA1Q9UJY5 639 aa12.14□□□□□ -0.47
PCCB-213ENST00000475214 NSFL1CQ9UNZ2 370 aaKnown RBP12.14□□□□□ -0.47
PCCB-213ENST00000475214 ARFGEF1Q9Y6D6 1849 aa12.14□□□□□ -0.47
PCCB-213ENST00000475214 MYH13Q9UKX3 1938 aa12.13□□□□□ -0.47
PCCB-213ENST00000475214 CEP350Q5VT06 3117 aa12.13□□□□□ -0.47
PCCB-213ENST00000475214 ANKRD31Q8N7Z5 1873 aa12.13□□□□□ -0.47
PCCB-213ENST00000475214 ZNF213O14771 459 aa12.13□□□□□ -0.47
PCCB-213ENST00000475214 PPEF1O14829 653 aaPredicted RBP12.13□□□□□ -0.47
PCCB-213ENST00000475214 FGAP02671 866 aa12.13□□□□□ -0.47
PCCB-213ENST00000475214 APPP05067 770 aa12.13□□□□□ -0.47
PCCB-213ENST00000475214 GNAT2P19087 354 aa12.13□□□□□ -0.47
PCCB-213ENST00000475214 CYP7A1P22680 504 aa12.13□□□□□ -0.47
PCCB-213ENST00000475214 KLRK1P26718 216 aa12.13□□□□□ -0.47
PCCB-213ENST00000475214 NUCB2P80303 420 aa12.13□□□□□ -0.47
PCCB-213ENST00000475214 SPTY2D1Q68D10 685 aaPredicted RBP12.13□□□□□ -0.47
PCCB-213ENST00000475214 TMED8Q6PL24 325 aaPredicted RBP12.13□□□□□ -0.47
PCCB-213ENST00000475214 C2CD5Q86YS7 1000 aa12.13□□□□□ -0.47
PCCB-213ENST00000475214 ZGPATQ8N5A5 531 aaKnown RBP12.13□□□□□ -0.47
PCCB-213ENST00000475214 DNAJC5GQ8N7S2 189 aa12.13□□□□□ -0.47
PCCB-213ENST00000475214 STRBPQ96SI9 672 aaKnown RBP12.13□□□□□ -0.47
PCCB-213ENST00000475214 PODXL2Q9NZ53 605 aa12.13□□□□□ -0.47
PCCB-213ENST00000475214 ZC3H4Q9UPT8 1303 aaKnown RBP12.12□□□□□ -0.47
PCCB-213ENST00000475214 PATL2C9JE40 543 aaKnown RBP12.12□□□□□ -0.47
PCCB-213ENST00000475214 E7EWF7 191 aa12.12□□□□□ -0.47
PCCB-213ENST00000475214 UFL1O94874 794 aa12.12□□□□□ -0.47
PCCB-213ENST00000475214 SRGNP10124 158 aa12.12□□□□□ -0.47
PCCB-213ENST00000475214 MASTLQ96GX5 879 aa12.12□□□□□ -0.47
PCCB-213ENST00000475214 NMRK2Q9NPI5 230 aa12.12□□□□□ -0.47
PCCB-213ENST00000475214 RNF181Q9P0P0 153 aa12.12□□□□□ -0.47
PCCB-213ENST00000475214 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.12□□□□□ -0.47
PCCB-213ENST00000475214 TAF6LQ9Y6J9 622 aa12.12□□□□□ -0.47
PCCB-213ENST00000475214 IRS2Q9Y4H2 1338 aa12.11□□□□□ -0.47
PCCB-213ENST00000475214 COL1A1P02452 1464 aaPredicted RBP12.11□□□□□ -0.47
PCCB-213ENST00000475214 MBD4O95243 580 aa12.11□□□□□ -0.47
PCCB-213ENST00000475214 FGD1P98174 961 aa12.11□□□□□ -0.47
PCCB-213ENST00000475214 CHAF1AQ13111 956 aaPredicted RBP12.11□□□□□ -0.47
PCCB-213ENST00000475214 RAB3GAP1Q15042 981 aa12.11□□□□□ -0.47
PCCB-213ENST00000475214 ALX1Q15699 326 aa12.11□□□□□ -0.47
PCCB-213ENST00000475214 TTLL5Q6EMB2 1281 aa12.11□□□□□ -0.47
PCCB-213ENST00000475214 NAA16Q6N069 864 aaPredicted RBP12.11□□□□□ -0.47
PCCB-213ENST00000475214 DHX32Q7L7V1 743 aaKnown RBP12.11□□□□□ -0.47
PCCB-213ENST00000475214 TXNRD3Q86VQ6 643 aa12.11□□□□□ -0.47
PCCB-213ENST00000475214 TDRD7Q8NHU6 1098 aaKnown RBP12.11□□□□□ -0.47
PCCB-213ENST00000475214 WDR66Q8TBY9 1149 aa12.11□□□□□ -0.47
PCCB-213ENST00000475214 NACAP1Q9BZK3 213 aa12.11□□□□□ -0.47
PCCB-213ENST00000475214 ARMT1Q9H993 441 aa12.11□□□□□ -0.47
PCCB-213ENST00000475214 ATP6V0A2Q9Y487 856 aa12.11□□□□□ -0.47
PCCB-213ENST00000475214 WDR90Q96KV7 1748 aa12.11□□□□□ -0.47
PCCB-213ENST00000475214 ZMYM6O95789 1325 aa12.11□□□□□ -0.47
PCCB-213ENST00000475214 MAGEB6P1A0A0J9YX57 407 aa12.1□□□□□ -0.47
PCCB-213ENST00000475214 C6orf229H3BNL8 230 aa12.1□□□□□ -0.47
PCCB-213ENST00000475214 FOXP2O15409 715 aa12.1□□□□□ -0.47
PCCB-213ENST00000475214 LMNB1P20700 586 aa12.1□□□□□ -0.47
PCCB-213ENST00000475214 SOGA3Q5TF21 947 aa12.1□□□□□ -0.47
PCCB-213ENST00000475214 STOX1Q6ZVD7 989 aa12.1□□□□□ -0.47
PCCB-213ENST00000475214 TBC1D16Q8TBP0 767 aa12.1□□□□□ -0.47
PCCB-213ENST00000475214 RBM46Q8TBY0 533 aaKnown RBP12.1□□□□□ -0.47
PCCB-213ENST00000475214 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
PCCB-213ENST00000475214 ZNF622Q969S3 477 aaKnown RBP eCLIP12.1□□□□□ -0.47
PCCB-213ENST00000475214 SLC4A4Q9Y6R1 1079 aa12.1□□□□□ -0.47
PCCB-213ENST00000475214 LRRC37AA6NMS7 1700 aa12.1□□□□□ -0.47
PCCB-213ENST00000475214 SALL1Q9NSC2 1324 aa12.1□□□□□ -0.47
PCCB-213ENST00000475214 LAMA4Q16363 1823 aa12.09□□□□□ -0.47
PCCB-213ENST00000475214 HAND2P61296 217 aa12.09□□□□□ -0.47
PCCB-213ENST00000475214 TRDNQ13061 729 aa12.09□□□□□ -0.47
PCCB-213ENST00000475214 TOB2Q14106 344 aaPredicted RBP12.09□□□□□ -0.47
PCCB-213ENST00000475214 STYK1Q6J9G0 422 aa12.09□□□□□ -0.47
PCCB-213ENST00000475214 Q6ZUG5 572 aa12.09□□□□□ -0.47
PCCB-213ENST00000475214 RALYLQ86SE5 291 aaKnown RBP12.09□□□□□ -0.47
PCCB-213ENST00000475214 IFNL3Q8IZI9 196 aa12.09□□□□□ -0.47
PCCB-213ENST00000475214 MIGA1Q8NAN2 632 aa12.09□□□□□ -0.47
PCCB-213ENST00000475214 NCOA7Q8NI08 942 aa12.09□□□□□ -0.47
PCCB-213ENST00000475214 TNPO1Q92973 898 aaKnown RBP12.09□□□□□ -0.47
PCCB-213ENST00000475214 TCEANC2Q96MN5 208 aa12.09□□□□□ -0.47
PCCB-213ENST00000475214 GBP4Q96PP9 640 aa12.09□□□□□ -0.47
PCCB-213ENST00000475214 LARP6Q9BRS8 491 aaKnown RBP12.09□□□□□ -0.47
PCCB-213ENST00000475214 NAPBQ9H115 298 aa12.09□□□□□ -0.47
PCCB-213ENST00000475214 CCDC88AQ3V6T2 1871 aa12.08□□□□□ -0.48
PCCB-213ENST00000475214 TDO2P48775 406 aa12.08□□□□□ -0.48
PCCB-213ENST00000475214 GSTO1P78417 241 aa12.08□□□□□ -0.48
PCCB-213ENST00000475214 EXOSC10Q01780 885 aaKnown RBP12.08□□□□□ -0.48
PCCB-213ENST00000475214 MECOMQ03112 1051 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms