RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 PLIN1O60240 522 aa20.22■□□□□ 0.83
ITGB1-211ENST00000475184 MAP3K9P80192 1104 aa20.21■□□□□ 0.83
ITGB1-211ENST00000475184 CCDC27Q2M243 656 aa20.21■□□□□ 0.83
ITGB1-211ENST00000475184 TAF7LQ5H9L4 462 aa20.21■□□□□ 0.83
ITGB1-211ENST00000475184 LMBR1LQ6UX01 489 aa20.21■□□□□ 0.83
ITGB1-211ENST00000475184 LDHAL6AQ6ZMR3 332 aa20.21■□□□□ 0.83
ITGB1-211ENST00000475184 WWC1Q8IX03 1113 aa20.21■□□□□ 0.83
ITGB1-211ENST00000475184 DZIP1LQ8IYY4 767 aaKnown RBP20.21■□□□□ 0.83
ITGB1-211ENST00000475184 FAM43AQ8N2R8 423 aa20.21■□□□□ 0.83
ITGB1-211ENST00000475184 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.21■□□□□ 0.83
ITGB1-211ENST00000475184 OTUD5Q96G74 571 aa20.21■□□□□ 0.83
ITGB1-211ENST00000475184 ZNF594Q96JF6 807 aaPredicted RBP20.21■□□□□ 0.83
ITGB1-211ENST00000475184 TMEM39BQ9GZU3 492 aa20.21■□□□□ 0.83
ITGB1-211ENST00000475184 CNNM1Q9NRU3 951 aa20.21■□□□□ 0.83
ITGB1-211ENST00000475184 CSADQ9Y600 493 aa20.21■□□□□ 0.83
ITGB1-211ENST00000475184 TCP10L2B9ZVM9 353 aa20.2■□□□□ 0.82
ITGB1-211ENST00000475184 MYCP01106 439 aaPredicted RBP20.2■□□□□ 0.82
ITGB1-211ENST00000475184 CCDC57Q2TAC2 916 aa20.2■□□□□ 0.82
ITGB1-211ENST00000475184 TDRD7Q8NHU6 1098 aaKnown RBP20.2■□□□□ 0.82
ITGB1-211ENST00000475184 WDHD1O75717 1129 aaPredicted RBP20.19■□□□□ 0.82
ITGB1-211ENST00000475184 TNNI2P48788 182 aa20.19■□□□□ 0.82
ITGB1-211ENST00000475184 IL16Q14005 1332 aa20.19■□□□□ 0.82
ITGB1-211ENST00000475184 HIBADHP31937 336 aaKnown RBP20.18■□□□□ 0.82
ITGB1-211ENST00000475184 CRKP46108 304 aa20.18■□□□□ 0.82
ITGB1-211ENST00000475184 GYG1P46976 350 aa20.18■□□□□ 0.82
ITGB1-211ENST00000475184 EPHA10Q5JZY3 1008 aa20.18■□□□□ 0.82
ITGB1-211ENST00000475184 SH3TC2Q8TF17 1288 aa20.18■□□□□ 0.82
ITGB1-211ENST00000475184 SPDYE5A6NIY4 337 aa20.17■□□□□ 0.82
ITGB1-211ENST00000475184 F6X3S4 739 aa20.17■□□□□ 0.82
ITGB1-211ENST00000475184 H0YGN5 161 aa20.17■□□□□ 0.82
ITGB1-211ENST00000475184 TLR2O60603 784 aa20.17■□□□□ 0.82
ITGB1-211ENST00000475184 UBE4AQ14139 1066 aa20.17■□□□□ 0.82
ITGB1-211ENST00000475184 KIF22Q14807 665 aa20.17■□□□□ 0.82
ITGB1-211ENST00000475184 BEND3Q5T5X7 828 aa20.17■□□□□ 0.82
ITGB1-211ENST00000475184 ARHGAP39Q9C0H5 1083 aa20.17■□□□□ 0.82
ITGB1-211ENST00000475184 AK9Q5TCS8 1911 aa20.17■□□□□ 0.82
ITGB1-211ENST00000475184 MYH13Q9UKX3 1938 aa20.16■□□□□ 0.82
ITGB1-211ENST00000475184 GRM8O00222 908 aa20.16■□□□□ 0.82
ITGB1-211ENST00000475184 CETPP11597 493 aa20.16■□□□□ 0.82
ITGB1-211ENST00000475184 LACTBP83111 547 aaPredicted RBP20.16■□□□□ 0.82
ITGB1-211ENST00000475184 FAM84BQ96KN1 310 aaPredicted RBP20.16■□□□□ 0.82
ITGB1-211ENST00000475184 ZCCHC17Q9NP64 241 aaKnown RBP20.16■□□□□ 0.82
ITGB1-211ENST00000475184 FANCIQ9NVI1 1328 aa20.16■□□□□ 0.82
ITGB1-211ENST00000475184 SNCAIPQ9Y6H5 919 aa20.15■□□□□ 0.82
ITGB1-211ENST00000475184 BTBD19C9JJ37 291 aa20.14■□□□□ 0.81
ITGB1-211ENST00000475184 GNRH1P01148 92 aa20.14■□□□□ 0.81
ITGB1-211ENST00000475184 ERO1BQ86YB8 467 aa20.14■□□□□ 0.81
ITGB1-211ENST00000475184 MGAMO43451 1857 aa20.13■□□□□ 0.81
ITGB1-211ENST00000475184 VAMP4O75379 141 aa20.13■□□□□ 0.81
ITGB1-211ENST00000475184 CACNB3P54284 484 aa20.13■□□□□ 0.81
ITGB1-211ENST00000475184 PRMT2P55345 433 aa20.13■□□□□ 0.81
ITGB1-211ENST00000475184 SNAPC2Q13487 334 aa20.13■□□□□ 0.81
ITGB1-211ENST00000475184 GRIK5Q16478 980 aa20.13■□□□□ 0.81
ITGB1-211ENST00000475184 WRNIP1Q96S55 665 aa20.13■□□□□ 0.81
ITGB1-211ENST00000475184 IRF6O14896 467 aa20.12■□□□□ 0.81
ITGB1-211ENST00000475184 HDLBPQ00341 1268 aaKnown RBP20.12■□□□□ 0.81
ITGB1-211ENST00000475184 ZKSCAN4Q969J2 545 aaPredicted RBP20.12■□□□□ 0.81
ITGB1-211ENST00000475184 C9orf78Q9NZ63 289 aaPredicted RBP20.12■□□□□ 0.81
ITGB1-211ENST00000475184 PPIL2Q13356 520 aa20.11■□□□□ 0.81
ITGB1-211ENST00000475184 CHRDL2Q6WN34 429 aa20.11■□□□□ 0.81
ITGB1-211ENST00000475184 VPS37DQ86XT2 251 aa20.11■□□□□ 0.81
ITGB1-211ENST00000475184 TBC1D22AQ8WUA7 517 aa20.11■□□□□ 0.81
ITGB1-211ENST00000475184 TEKT1Q969V4 418 aa20.11■□□□□ 0.81
ITGB1-211ENST00000475184 SHISA4Q96DD7 197 aa20.11■□□□□ 0.81
ITGB1-211ENST00000475184 PUS3Q9BZE2 481 aaKnown RBP20.11■□□□□ 0.81
ITGB1-211ENST00000475184 TMOD2Q9NZR1 351 aa20.11■□□□□ 0.81
ITGB1-211ENST00000475184 IQSEC3Q9UPP2 1182 aaPredicted RBP20.11■□□□□ 0.81
ITGB1-211ENST00000475184 CHAF1AQ13111 956 aaPredicted RBP20.1■□□□□ 0.81
ITGB1-211ENST00000475184 FBXO33Q7Z6M2 555 aa20.1■□□□□ 0.81
ITGB1-211ENST00000475184 FAM83AQ86UY5 434 aa20.1■□□□□ 0.81
ITGB1-211ENST00000475184 HOOK2Q96ED9 719 aa20.1■□□□□ 0.81
ITGB1-211ENST00000475184 A0A0C4DFX4 3053 aa20.09■□□□□ 0.81
ITGB1-211ENST00000475184 MROH5Q6ZUA9 1318 aa20.09■□□□□ 0.81
ITGB1-211ENST00000475184 ECM2O94769 699 aaPredicted RBP20.09■□□□□ 0.81
ITGB1-211ENST00000475184 EXOSC9Q06265 439 aaKnown RBP20.09■□□□□ 0.81
ITGB1-211ENST00000475184 MTFR1Q15390 333 aa20.09■□□□□ 0.81
ITGB1-211ENST00000475184 FKBP1CQ5VVH2 108 aa20.09■□□□□ 0.81
ITGB1-211ENST00000475184 ZDHHC15Q96MV8 337 aa20.09■□□□□ 0.81
ITGB1-211ENST00000475184 RPAP1Q9BWH6 1393 aaPredicted RBP20.08■□□□□ 0.81
ITGB1-211ENST00000475184 COL6A3P12111 3177 aa20.08■□□□□ 0.81
ITGB1-211ENST00000475184 CUL9Q8IWT3 2517 aa20.08■□□□□ 0.81
ITGB1-211ENST00000475184 FRAT2O75474 233 aaPredicted RBP20.08■□□□□ 0.81
ITGB1-211ENST00000475184 CCDC184Q52MB2 194 aa20.08■□□□□ 0.81
ITGB1-211ENST00000475184 NCBP3Q53F19 620 aaKnown RBP20.08■□□□□ 0.81
ITGB1-211ENST00000475184 DCAF15Q66K64 600 aa20.08■□□□□ 0.81
ITGB1-211ENST00000475184 C17orf99Q6UX52 265 aa20.08■□□□□ 0.81
ITGB1-211ENST00000475184 DPF3Q92784 378 aa20.08■□□□□ 0.81
ITGB1-211ENST00000475184 TRIM47Q96LD4 638 aa20.08■□□□□ 0.81
ITGB1-211ENST00000475184 SRRDQ9UH36 339 aa20.08■□□□□ 0.81
ITGB1-211ENST00000475184 RIPOR2Q9Y4F9 1068 aa20.08■□□□□ 0.81
ITGB1-211ENST00000475184 LAMA3Q16787 3333 aa20.07■□□□□ 0.8
ITGB1-211ENST00000475184 ALDH1L1O75891 902 aa20.07■□□□□ 0.8
ITGB1-211ENST00000475184 CTGFP29279 349 aa20.07■□□□□ 0.8
ITGB1-211ENST00000475184 PSMC4P43686 418 aa20.07■□□□□ 0.8
ITGB1-211ENST00000475184 PPATQ06203 517 aa20.07■□□□□ 0.8
ITGB1-211ENST00000475184 CPA4Q9UI42 421 aa20.07■□□□□ 0.8
ITGB1-211ENST00000475184 CAVIN4Q5BKX8 364 aa20.06■□□□□ 0.8
ITGB1-211ENST00000475184 APOBEC3HQ6NTF7 200 aaKnown RBP20.06■□□□□ 0.8
ITGB1-211ENST00000475184 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.06■□□□□ 0.8
ITGB1-211ENST00000475184 NKX2-3Q8TAU0 364 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms