RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 HDLBPQ00341 1268 aaKnown RBP20.15■□□□□ 0.82
ITGB5-205ENST00000474838 RASA3Q14644 834 aa20.15■□□□□ 0.82
ITGB5-205ENST00000474838 GRIK5Q16478 980 aa20.15■□□□□ 0.82
ITGB5-205ENST00000474838 MAST3O60307 1309 aa20.14■□□□□ 0.81
ITGB5-205ENST00000474838 IL15P40933 162 aaPredicted RBP20.14■□□□□ 0.81
ITGB5-205ENST00000474838 HNRNPUQ00839 825 aaKnown RBP eCLIP20.14■□□□□ 0.81
ITGB5-205ENST00000474838 ATP2B3Q16720 1220 aa20.14■□□□□ 0.81
ITGB5-205ENST00000474838 ATF7IPQ6VMQ6 1270 aa20.14■□□□□ 0.81
ITGB5-205ENST00000474838 TEKT1Q969V4 418 aa20.14■□□□□ 0.81
ITGB5-205ENST00000474838 TDRD3Q9H7E2 651 aaKnown RBP20.14■□□□□ 0.81
ITGB5-205ENST00000474838 COPRSQ9NQ92 184 aa20.14■□□□□ 0.81
ITGB5-205ENST00000474838 CEP126Q9P2H0 1117 aa20.14■□□□□ 0.81
ITGB5-205ENST00000474838 FZD1Q9UP38 647 aa20.14■□□□□ 0.81
ITGB5-205ENST00000474838 SUGT1Q9Y2Z0 365 aa20.14■□□□□ 0.81
ITGB5-205ENST00000474838 UNCXA6NJT0 531 aa20.13■□□□□ 0.81
ITGB5-205ENST00000474838 SREBF2Q12772 1141 aa20.13■□□□□ 0.81
ITGB5-205ENST00000474838 CASP8AP2Q9UKL3 1982 aa20.13■□□□□ 0.81
ITGB5-205ENST00000474838 MYH13Q9UKX3 1938 aa20.12■□□□□ 0.81
ITGB5-205ENST00000474838 BCAR3O75815 825 aa20.12■□□□□ 0.81
ITGB5-205ENST00000474838 MTX1Q13505 466 aa20.12■□□□□ 0.81
ITGB5-205ENST00000474838 NBPF12Q5TAG4 269 aaPredicted RBP20.12■□□□□ 0.81
ITGB5-205ENST00000474838 SPRYD7Q5W111 196 aa20.12■□□□□ 0.81
ITGB5-205ENST00000474838 FRAT1Q92837 279 aaPredicted RBP20.12■□□□□ 0.81
ITGB5-205ENST00000474838 MCOLN1Q9GZU1 580 aa20.12■□□□□ 0.81
ITGB5-205ENST00000474838 PA2G4Q9UQ80 394 aaKnown RBP20.12■□□□□ 0.81
ITGB5-205ENST00000474838 IREB2P48200 963 aaKnown RBP20.11■□□□□ 0.81
ITGB5-205ENST00000474838 TM4SF4P48230 202 aa20.11■□□□□ 0.81
ITGB5-205ENST00000474838 TNNI2P48788 182 aa20.11■□□□□ 0.81
ITGB5-205ENST00000474838 MKRN3Q13064 507 aaKnown RBP20.11■□□□□ 0.81
ITGB5-205ENST00000474838 WDR66Q8TBY9 1149 aa20.11■□□□□ 0.81
ITGB5-205ENST00000474838 ZDHHC15Q96MV8 337 aa20.11■□□□□ 0.81
ITGB5-205ENST00000474838 MRIQ9BWK5 157 aa20.11■□□□□ 0.81
ITGB5-205ENST00000474838 SRGAP3O43295 1099 aa20.1■□□□□ 0.81
ITGB5-205ENST00000474838 ZBTB48P10074 688 aaPredicted RBP20.1■□□□□ 0.81
ITGB5-205ENST00000474838 DGKZQ13574 1117 aa20.1■□□□□ 0.81
ITGB5-205ENST00000474838 SLC10A4Q96EP9 437 aa20.1■□□□□ 0.81
ITGB5-205ENST00000474838 GNL3LQ9NVN8 582 aaKnown RBP20.1■□□□□ 0.81
ITGB5-205ENST00000474838 LAMB1P07942 1786 aa20.09■□□□□ 0.81
ITGB5-205ENST00000474838 TCP10L2B9ZVM9 353 aa20.09■□□□□ 0.81
ITGB5-205ENST00000474838 CLMNQ96JQ2 1002 aa20.09■□□□□ 0.81
ITGB5-205ENST00000474838 TEPSINQ96N21 525 aa20.09■□□□□ 0.81
ITGB5-205ENST00000474838 TNNQ9UQP3 1299 aa20.09■□□□□ 0.81
ITGB5-205ENST00000474838 OTOFQ9HC10 1997 aa20.08■□□□□ 0.81
ITGB5-205ENST00000474838 SEMA3EO15041 775 aa20.08■□□□□ 0.81
ITGB5-205ENST00000474838 USP2O75604 605 aaPredicted RBP20.08■□□□□ 0.81
ITGB5-205ENST00000474838 ZKSCAN2Q63HK3 967 aa20.08■□□□□ 0.81
ITGB5-205ENST00000474838 HHIPL2Q6UWX4 724 aa20.08■□□□□ 0.81
ITGB5-205ENST00000474838 ANKRD13AQ8IZ07 590 aa20.08■□□□□ 0.81
ITGB5-205ENST00000474838 CLUAP1Q96AJ1 413 aa20.08■□□□□ 0.81
ITGB5-205ENST00000474838 WNK4Q96J92 1243 aa20.08■□□□□ 0.81
ITGB5-205ENST00000474838 TMEM39BQ9GZU3 492 aa20.08■□□□□ 0.81
ITGB5-205ENST00000474838 TMOD2Q9NZR1 351 aa20.08■□□□□ 0.81
ITGB5-205ENST00000474838 MANSC4A6NHS7 340 aaPredicted RBP20.07■□□□□ 0.8
ITGB5-205ENST00000474838 ZBTB22O15209 634 aa20.07■□□□□ 0.8
ITGB5-205ENST00000474838 GNAI2P04899 355 aa20.07■□□□□ 0.8
ITGB5-205ENST00000474838 APOBEC3HQ6NTF7 200 aaKnown RBP20.07■□□□□ 0.8
ITGB5-205ENST00000474838 CDAN1Q8IWY9 1227 aa20.07■□□□□ 0.8
ITGB5-205ENST00000474838 SALL1Q9NSC2 1324 aa20.06■□□□□ 0.8
ITGB5-205ENST00000474838 PHKA1P46020 1223 aa20.06■□□□□ 0.8
ITGB5-205ENST00000474838 CACNB3P54284 484 aa20.06■□□□□ 0.8
ITGB5-205ENST00000474838 FKBP1CQ5VVH2 108 aa20.06■□□□□ 0.8
ITGB5-205ENST00000474838 CFHR5Q9BXR6 569 aa20.06■□□□□ 0.8
ITGB5-205ENST00000474838 DENND2AQ9ULE3 1009 aa20.06■□□□□ 0.8
ITGB5-205ENST00000474838 RPAP1Q9BWH6 1393 aaPredicted RBP20.06■□□□□ 0.8
ITGB5-205ENST00000474838 ZBED9Q6R2W3 1325 aa20.05■□□□□ 0.8
ITGB5-205ENST00000474838 TBC1D8O95759 1140 aa20.05■□□□□ 0.8
ITGB5-205ENST00000474838 ADORA1P30542 326 aa20.05■□□□□ 0.8
ITGB5-205ENST00000474838 INHBEP58166 350 aa20.05■□□□□ 0.8
ITGB5-205ENST00000474838 NOM1Q5C9Z4 860 aaKnown RBP20.05■□□□□ 0.8
ITGB5-205ENST00000474838 FAM83AQ86UY5 434 aa20.05■□□□□ 0.8
ITGB5-205ENST00000474838 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.05■□□□□ 0.8
ITGB5-205ENST00000474838 CCDC85CA6NKD9 419 aa20.04■□□□□ 0.8
ITGB5-205ENST00000474838 ALDH1A1P00352 501 aa20.04■□□□□ 0.8
ITGB5-205ENST00000474838 LDHBP07195 334 aaKnown RBP20.04■□□□□ 0.8
ITGB5-205ENST00000474838 PRDX5P30044 214 aa20.04■□□□□ 0.8
ITGB5-205ENST00000474838 CCDC102BQ68D86 513 aa20.04■□□□□ 0.8
ITGB5-205ENST00000474838 CTU1Q7Z7A3 348 aaKnown RBP20.04■□□□□ 0.8
ITGB5-205ENST00000474838 TMEM57Q8N5G2 664 aa20.04■□□□□ 0.8
ITGB5-205ENST00000474838 AKAP2Q9Y2D5 859 aa20.04■□□□□ 0.8
ITGB5-205ENST00000474838 DAGLAQ9Y4D2 1042 aa20.04■□□□□ 0.8
ITGB5-205ENST00000474838 PDS5AQ29RF7 1337 aaKnown RBP20.03■□□□□ 0.8
ITGB5-205ENST00000474838 A0A1B0GUL7 405 aa20.03■□□□□ 0.8
ITGB5-205ENST00000474838 TFCP2Q12800 502 aa20.03■□□□□ 0.8
ITGB5-205ENST00000474838 DIXDC1Q155Q3 683 aa20.03■□□□□ 0.8
ITGB5-205ENST00000474838 GJA5P36382 358 aa20.02■□□□□ 0.8
ITGB5-205ENST00000474838 RASGRF1Q13972 1273 aa20.02■□□□□ 0.8
ITGB5-205ENST00000474838 MVPQ14764 893 aaKnown RBP20.02■□□□□ 0.8
ITGB5-205ENST00000474838 IFNL1Q8IU54 200 aa20.02■□□□□ 0.8
ITGB5-205ENST00000474838 ZGPATQ8N5A5 531 aaKnown RBP20.02■□□□□ 0.8
ITGB5-205ENST00000474838 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.02■□□□□ 0.8
ITGB5-205ENST00000474838 ZNF296Q8WUU4 475 aaPredicted RBP20.02■□□□□ 0.8
ITGB5-205ENST00000474838 HOOK2Q96ED9 719 aa20.02■□□□□ 0.8
ITGB5-205ENST00000474838 ELP3Q9H9T3 547 aa20.02■□□□□ 0.8
ITGB5-205ENST00000474838 PNMA6EA0A0J9YXQ4 647 aa20.01■□□□□ 0.79
ITGB5-205ENST00000474838 GPR25O00155 361 aa20.01■□□□□ 0.79
ITGB5-205ENST00000474838 TIMM10P62072 90 aa20.01■□□□□ 0.79
ITGB5-205ENST00000474838 VGLL4Q14135 290 aa20.01■□□□□ 0.79
ITGB5-205ENST00000474838 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.01■□□□□ 0.79
ITGB5-205ENST00000474838 FTSJ3Q8IY81 847 aaKnown RBP20.01■□□□□ 0.79
ITGB5-205ENST00000474838 IGF2BP3O00425 579 aaKnown RBP eCLIP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms