RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 GJB2P29033 226 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 CCT4P50991 539 aaKnown RBP4.79□□□□□ -1.64
USP16-205ENST00000474835 ZNF568Q3ZCX4 644 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 NOM1Q5C9Z4 860 aaKnown RBP4.79□□□□□ -1.64
USP16-205ENST00000474835 BICD2Q8TD16 824 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 PPP1R12AO14974 1030 aaPredicted RBP4.79□□□□□ -1.64
USP16-205ENST00000474835 MGRN1O60291 552 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 PIM1P11309 404 aaPredicted RBP4.79□□□□□ -1.64
USP16-205ENST00000474835 TNFAIP8L3Q5GJ75 292 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 CDKAL1Q5VV42 579 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 SH3RF1Q7Z6J0 888 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 TADA2BQ86TJ2 420 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 THUMPD2Q9BTF0 503 aaKnown RBP4.79□□□□□ -1.64
USP16-205ENST00000474835 SCAND2PQ9GZW5 306 aaPredicted RBP4.79□□□□□ -1.64
USP16-205ENST00000474835 ZCCHC17Q9NP64 241 aaKnown RBP4.79□□□□□ -1.64
USP16-205ENST00000474835 A0A087WUV0 522 aaPredicted RBP4.78□□□□□ -1.64
USP16-205ENST00000474835 GOLGA6L6A8MZA4 724 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 PFKFB2O60825 505 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 LCA5LO95447 670 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 HOXB7P09629 217 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 RPS6KB1P23443 525 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 HNRNPH1P31943 449 aaKnown RBP4.78□□□□□ -1.64
USP16-205ENST00000474835 NR1I3Q14994 352 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 LONRF2Q1L5Z9 754 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 JAKMIP3Q5VZ66 844 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 MREGQ8N565 214 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 FAM71BQ8TC56 605 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.78□□□□□ -1.64
USP16-205ENST00000474835 CLIP2Q9UDT6 1046 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 ATP8B3O60423 1300 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 SIP14410 1827 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 NUP98P52948 1817 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 A6NHS1 94 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 TMCO5BA8MYB1 307 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 COQ9O75208 318 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 SEC31AO94979 1220 aaKnown RBP4.78□□□□□ -1.64
USP16-205ENST00000474835 IVLP07476 585 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 SKILP12757 684 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 G2E3Q7L622 706 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 TRAPPC11Q7Z392 1133 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 BRAPQ7Z569 592 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 FILIP1Q7Z7B0 1213 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 NUP62CLQ9H1M0 184 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 POLR3EQ9NVU0 708 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 DACT1Q9NYF0 836 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 REXO2Q9Y3B8 237 aaKnown RBP4.78□□□□□ -1.64
USP16-205ENST00000474835 LRRFIP2Q9Y608 721 aaKnown RBP4.78□□□□□ -1.64
USP16-205ENST00000474835 COL4A1P02462 1669 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 PLEKHG3A1L390 1219 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 LIN7AO14910 233 aaPredicted RBP4.78□□□□□ -1.64
USP16-205ENST00000474835 PPFIA3O75145 1194 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 PRKAR2BP31323 418 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 STX1AQ16623 288 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 PAPD7Q5XG87 772 aaKnown RBP4.78□□□□□ -1.64
USP16-205ENST00000474835 ZNF771Q7L3S4 317 aaPredicted RBP4.78□□□□□ -1.64
USP16-205ENST00000474835 TAX1BP1Q86VP1 789 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 FOXP4Q8IVH2 680 aaPredicted RBP4.78□□□□□ -1.64
USP16-205ENST00000474835 PLCD3Q8N3E9 789 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 C3orf20Q8ND61 904 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 CFAP61Q8NHU2 1237 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 PPM1EQ8WY54 764 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 ZKSCAN4Q969J2 545 aaPredicted RBP4.78□□□□□ -1.64
USP16-205ENST00000474835 AZIN2Q96A70 460 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 PANX2Q96RD6 677 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.78□□□□□ -1.64
USP16-205ENST00000474835 TSKSQ9UJT2 592 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 HPCAL4Q9UM19 191 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 HDAC5Q9UQL6 1122 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 STK36Q9NRP7 1315 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 FNDC1Q4ZHG4 1894 aaPredicted RBP4.78□□□□□ -1.64
USP16-205ENST00000474835 DOCK5Q9H7D0 1870 aa4.78□□□□□ -1.64
USP16-205ENST00000474835 LTBP1Q14766 1721 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 A0A1B0GTH6 734 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 N4BP1O75113 896 aaKnown RBP4.77□□□□□ -1.65
USP16-205ENST00000474835 MYCNP04198 464 aaPredicted RBP4.77□□□□□ -1.65
USP16-205ENST00000474835 RFX5P48382 616 aaPredicted RBP4.77□□□□□ -1.65
USP16-205ENST00000474835 PTPN14Q15678 1187 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 ZKSCAN8Q15776 578 aaPredicted RBP4.77□□□□□ -1.65
USP16-205ENST00000474835 BEND3Q5T5X7 828 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 SYNE3Q6ZMZ3 975 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 NSUN7Q8NE18 718 aaKnown RBP4.77□□□□□ -1.65
USP16-205ENST00000474835 TTYH3Q9C0H2 523 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 ANKRD18BA2A2Z9 1011 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 SLC27A2O14975 620 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 AFAP1Q8N556 730 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 DPF2Q92785 391 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 METP08581 1390 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 DCCP43146 1447 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 H0YGN5 161 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 STX10O60499 249 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 OAS1P00973 400 aaKnown RBP4.77□□□□□ -1.65
USP16-205ENST00000474835 TPM4P67936 248 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 FAM160A1Q05DH4 1040 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 ZNF483Q8TF39 744 aaPredicted RBP4.77□□□□□ -1.65
USP16-205ENST00000474835 MMTAG2Q9BU76 263 aaKnown RBP4.77□□□□□ -1.65
USP16-205ENST00000474835 SUFUQ9UMX1 484 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 NFS1Q9Y697 457 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 MYH10P35580 1976 aa4.77□□□□□ -1.65
USP16-205ENST00000474835 PSMD14O00487 310 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 CASP7P55210 303 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms