RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 ARHGAP6O43182 974 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 HSP90B1P14625 803 aaKnown RBP9.27□□□□□ -0.93
CCDC93-208ENST00000474546 ATP5JP18859 108 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 TEFQ10587 303 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 MSL1Q68DK7 614 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 FBXO38Q6PIJ6 1188 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 DHX32Q7L7V1 743 aaKnown RBP9.27□□□□□ -0.93
CCDC93-208ENST00000474546 HOMER1Q86YM7 354 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 IPO4Q8TEX9 1081 aaKnown RBP9.27□□□□□ -0.93
CCDC93-208ENST00000474546 BBXQ8WY36 941 aaPredicted RBP9.27□□□□□ -0.93
CCDC93-208ENST00000474546 RABGGTAQ92696 567 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 BRF1Q92994 677 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 CHAMP1Q96JM3 812 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 EYA1Q99502 592 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 DSCC1Q9BVC3 393 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 UTP14AQ9BVJ6 771 aaKnown RBP9.27□□□□□ -0.93
CCDC93-208ENST00000474546 NAA15Q9BXJ9 866 aaKnown RBP9.27□□□□□ -0.93
CCDC93-208ENST00000474546 ARFGAP3Q9NP61 516 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 HELLSQ9NRZ9 838 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 BCS1LQ9Y276 419 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 PRR36Q9H6K5 1346 aa9.27□□□□□ -0.93
CCDC93-208ENST00000474546 SLIT3O75094 1523 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 TMEM88BA6NKF7 163 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 CDKL5O76039 1030 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 LARGE1O95461 756 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 NLRP12P59046 1061 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 EIF4A1P60842 406 aaKnown RBP9.26□□□□□ -0.93
CCDC93-208ENST00000474546 PTH1RQ03431 593 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 LRMPQ12912 555 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 NMIQ13287 307 aaPredicted RBP9.26□□□□□ -0.93
CCDC93-208ENST00000474546 SF3A1Q15459 793 aaKnown RBP9.26□□□□□ -0.93
CCDC93-208ENST00000474546 ELF2Q15723 593 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 ADCK5Q3MIX3 580 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 MCMDC2Q4G0Z9 681 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 PLEKHO1Q53GL0 409 aaPredicted RBP9.26□□□□□ -0.93
CCDC93-208ENST00000474546 AKAP4Q5JQC9 854 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 KCNH5Q8NCM2 988 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 GOLGA5Q8TBA6 731 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 HNRNPLLQ8WVV9 542 aaKnown RBP9.26□□□□□ -0.93
CCDC93-208ENST00000474546 AGXT2Q9BYV1 514 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 KIAA1468Q9P260 1216 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 COL18A1P39060 1754 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 WNK3Q9BYP7 1800 aa9.26□□□□□ -0.93
CCDC93-208ENST00000474546 CCDC151A5D8V7 595 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 RASSF10A6NK89 507 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 A6NNZ2 444 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 GRM8O00222 908 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 CA12O43570 354 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 STX10O60499 249 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 SMC2O95347 1197 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 SLC3A2P08195 630 aaKnown RBP9.25□□□□□ -0.93
CCDC93-208ENST00000474546 PNMA6AP0CW24 399 aaPredicted RBP9.25□□□□□ -0.93
CCDC93-208ENST00000474546 ME1P48163 572 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 ZC3H6P61129 1189 aaKnown RBP9.25□□□□□ -0.93
CCDC93-208ENST00000474546 TOB2Q14106 344 aaPredicted RBP9.25□□□□□ -0.93
CCDC93-208ENST00000474546 DEFB115Q30KQ5 88 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 TUBB8Q3ZCM7 444 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 ARHGAP29Q52LW3 1261 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 CHADLQ6NUI6 762 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 CPLX2Q6PUV4 134 aaKnown RBP9.25□□□□□ -0.93
CCDC93-208ENST00000474546 OLFM4Q6UX06 510 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 LEKR1Q6ZMV7 388 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 SYNE3Q6ZMZ3 975 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 COL23A1Q86Y22 540 aaPredicted RBP9.25□□□□□ -0.93
CCDC93-208ENST00000474546 DHX40Q8IX18 779 aaKnown RBP9.25□□□□□ -0.93
CCDC93-208ENST00000474546 IQUBQ8NA54 791 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 ENGASEQ8NFI3 743 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 TSC1Q92574 1164 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 PGBD1Q96JS3 809 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 PPP1R13BQ96KQ4 1090 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 RASSF4Q9H2L5 321 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 GPR108Q9NPR9 543 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 RNF181Q9P0P0 153 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 SBF1O95248 1867 aa9.25□□□□□ -0.93
CCDC93-208ENST00000474546 PALLDQ8WX93 1383 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 ABCC12Q96J65 1359 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 UNC80Q8N2C7 3258 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 KAT6BQ8WYB5 2073 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 PI4KAP2A4QPH2 592 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 GLTPD2A6NH11 291 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 TAF5LO75529 589 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 ZRANB2O95218 330 aaKnown RBP eCLIP9.24□□□□□ -0.93
CCDC93-208ENST00000474546 ZFYP08048 801 aaPredicted RBP9.24□□□□□ -0.93
CCDC93-208ENST00000474546 CMA1P23946 247 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 HOXC9P31274 260 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 TNNT3P45378 269 aaPredicted RBP9.24□□□□□ -0.93
CCDC93-208ENST00000474546 EVCP57679 992 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 STK38Q15208 465 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 KANK3Q6NY19 840 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 FERMT3Q86UX7 667 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 CEP112Q8N8E3 955 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 PI4KAP1Q8N8J0 262 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 NECAB1Q8N987 351 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 TRIML1Q8N9V2 468 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 FSIP1Q8NA03 581 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 NGDNQ8NEJ9 315 aaKnown RBP9.24□□□□□ -0.93
CCDC93-208ENST00000474546 GOLGA1Q92805 767 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 YY1AP1Q9H869 796 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 COPRSQ9NQ92 184 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 PRDM6Q9NQX0 595 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms