RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 PRDX5P30044 214 aa10.06□□□□□ -0.8
CNN3-205ENST00000474409 SLC9C2Q5TAH2 1124 aa10.06□□□□□ -0.8
CNN3-205ENST00000474409 CIAPIN1Q6FI81 312 aa10.06□□□□□ -0.8
CNN3-205ENST00000474409 MAGEB6Q8N7X4 407 aa10.06□□□□□ -0.8
CNN3-205ENST00000474409 RUFY2Q8WXA3 655 aa10.06□□□□□ -0.8
CNN3-205ENST00000474409 RAD50Q92878 1312 aa10.06□□□□□ -0.8
CNN3-205ENST00000474409 MYH4Q9Y623 1939 aa10.05□□□□□ -0.8
CNN3-205ENST00000474409 PSMD14O00487 310 aa10.05□□□□□ -0.8
CNN3-205ENST00000474409 RNF113AO15541 343 aaKnown RBP10.05□□□□□ -0.8
CNN3-205ENST00000474409 CHMLP26374 656 aa10.05□□□□□ -0.8
CNN3-205ENST00000474409 ADD2P35612 726 aa10.05□□□□□ -0.8
CNN3-205ENST00000474409 PRELPP51888 382 aa10.05□□□□□ -0.8
CNN3-205ENST00000474409 FKBP1AP62942 108 aaKnown RBP10.05□□□□□ -0.8
CNN3-205ENST00000474409 GSTO1P78417 241 aa10.05□□□□□ -0.8
CNN3-205ENST00000474409 NMIQ13287 307 aaPredicted RBP10.05□□□□□ -0.8
CNN3-205ENST00000474409 DACT2Q5SW24 774 aa10.05□□□□□ -0.8
CNN3-205ENST00000474409 NAA16Q6N069 864 aaPredicted RBP10.05□□□□□ -0.8
CNN3-205ENST00000474409 CWC27Q6UX04 472 aaKnown RBP10.05□□□□□ -0.8
CNN3-205ENST00000474409 TICAM2Q86XR7 235 aa10.05□□□□□ -0.8
CNN3-205ENST00000474409 APPBP2Q92624 585 aa10.05□□□□□ -0.8
CNN3-205ENST00000474409 MXD3Q9BW11 206 aa10.05□□□□□ -0.8
CNN3-205ENST00000474409 KCNQ5Q9NR82 932 aa10.05□□□□□ -0.8
CNN3-205ENST00000474409 TTF2Q9UNY4 1162 aaKnown RBP10.05□□□□□ -0.8
CNN3-205ENST00000474409 SUGT1Q9Y2Z0 365 aa10.05□□□□□ -0.8
CNN3-205ENST00000474409 ZNF541Q9H0D2 1346 aa10.05□□□□□ -0.8
CNN3-205ENST00000474409 ZNF532Q9HCE3 1301 aa10.05□□□□□ -0.8
CNN3-205ENST00000474409 A0A0D9SFI3 127 aa10.04□□□□□ -0.8
CNN3-205ENST00000474409 EIF5BO60841 1220 aaKnown RBP10.04□□□□□ -0.8
CNN3-205ENST00000474409 IGSF3O75054 1194 aa10.04□□□□□ -0.8
CNN3-205ENST00000474409 CYP7A1P22680 504 aa10.04□□□□□ -0.8
CNN3-205ENST00000474409 MECOMQ03112 1051 aa10.04□□□□□ -0.8
CNN3-205ENST00000474409 TNIP1Q15025 636 aa10.04□□□□□ -0.8
CNN3-205ENST00000474409 C8orf34Q49A92 452 aa10.04□□□□□ -0.8
CNN3-205ENST00000474409 C9orf131Q5VYM1 1079 aa10.04□□□□□ -0.8
CNN3-205ENST00000474409 RSBN1LQ6PCB5 846 aaPredicted RBP10.04□□□□□ -0.8
CNN3-205ENST00000474409 KIAA0825Q8IV33 1275 aa10.04□□□□□ -0.8
CNN3-205ENST00000474409 SLF2Q8IX21 1173 aa10.04□□□□□ -0.8
CNN3-205ENST00000474409 CERS5Q8N5B7 392 aa10.04□□□□□ -0.8
CNN3-205ENST00000474409 NSUN4Q96CB9 384 aaKnown RBP10.04□□□□□ -0.8
CNN3-205ENST00000474409 FAM227BQ96M60 508 aa10.04□□□□□ -0.8
CNN3-205ENST00000474409 NOL10Q9BSC4 688 aaKnown RBP10.04□□□□□ -0.8
CNN3-205ENST00000474409 GJA3Q9Y6H8 435 aa10.04□□□□□ -0.8
CNN3-205ENST00000474409 MROH7-TTC4A0A0A0MT08 1334 aa10.04□□□□□ -0.8
CNN3-205ENST00000474409 FZD9O00144 591 aa10.03□□□□□ -0.8
CNN3-205ENST00000474409 CHGBP05060 677 aa10.03□□□□□ -0.8
CNN3-205ENST00000474409 MFAP1P55081 439 aaKnown RBP10.03□□□□□ -0.8
CNN3-205ENST00000474409 CXCL9Q07325 125 aa10.03□□□□□ -0.8
CNN3-205ENST00000474409 UBE3CQ15386 1083 aa10.03□□□□□ -0.8
CNN3-205ENST00000474409 GRIK5Q16478 980 aa10.03□□□□□ -0.8
CNN3-205ENST00000474409 SLFNL1Q499Z3 407 aa10.03□□□□□ -0.8
CNN3-205ENST00000474409 ZMYM1Q5SVZ6 1142 aa10.03□□□□□ -0.8
CNN3-205ENST00000474409 TMED8Q6PL24 325 aaPredicted RBP10.03□□□□□ -0.8
CNN3-205ENST00000474409 AIDAQ96BJ3 306 aa10.03□□□□□ -0.8
CNN3-205ENST00000474409 TRPM7Q96QT4 1865 aa10.03□□□□□ -0.8
CNN3-205ENST00000474409 ESYT1Q9BSJ8 1104 aa10.03□□□□□ -0.8
CNN3-205ENST00000474409 HELLSQ9NRZ9 838 aa10.03□□□□□ -0.8
CNN3-205ENST00000474409 HDAC9Q9UKV0 1011 aa10.03□□□□□ -0.8
CNN3-205ENST00000474409 MYH6P13533 1939 aa10.03□□□□□ -0.8
CNN3-205ENST00000474409 CCDC171Q6TFL3 1326 aa10.03□□□□□ -0.8
CNN3-205ENST00000474409 ZC3H4Q9UPT8 1303 aaKnown RBP10.03□□□□□ -0.8
CNN3-205ENST00000474409 SRCAPQ6ZRS2 3230 aa10.02□□□□□ -0.81
CNN3-205ENST00000474409 TCRBV5S4A2TA0A5A2 114 aa10.02□□□□□ -0.81
CNN3-205ENST00000474409 M0R2C6 588 aa10.02□□□□□ -0.81
CNN3-205ENST00000474409 REC8O95072 547 aa10.02□□□□□ -0.81
CNN3-205ENST00000474409 LDHCP07864 332 aa10.02□□□□□ -0.81
CNN3-205ENST00000474409 VIL1P09327 827 aaKnown RBP10.02□□□□□ -0.81
CNN3-205ENST00000474409 SCNN1DP51172 638 aa10.02□□□□□ -0.81
CNN3-205ENST00000474409 RBM5P52756 815 aaKnown RBP eCLIP10.02□□□□□ -0.81
CNN3-205ENST00000474409 DIXDC1Q155Q3 683 aa10.02□□□□□ -0.81
CNN3-205ENST00000474409 MCMDC2Q4G0Z9 681 aa10.02□□□□□ -0.81
CNN3-205ENST00000474409 MIGA1Q8NAN2 632 aa10.02□□□□□ -0.81
CNN3-205ENST00000474409 AGBL3Q8NEM8 1001 aa10.02□□□□□ -0.81
CNN3-205ENST00000474409 TEKT1Q969V4 418 aa10.02□□□□□ -0.81
CNN3-205ENST00000474409 ZBTB12Q9Y330 459 aaPredicted RBP10.02□□□□□ -0.81
CNN3-205ENST00000474409 OTOFQ9HC10 1997 aa10.01□□□□□ -0.81
CNN3-205ENST00000474409 MAGEB6P1A0A0J9YX57 407 aa10.01□□□□□ -0.81
CNN3-205ENST00000474409 SGSM2O43147 1006 aa10.01□□□□□ -0.81
CNN3-205ENST00000474409 GPAA1O43292 621 aa10.01□□□□□ -0.81
CNN3-205ENST00000474409 MBD4O95243 580 aa10.01□□□□□ -0.81
CNN3-205ENST00000474409 RPS12P25398 132 aaKnown RBP10.01□□□□□ -0.81
CNN3-205ENST00000474409 CRKP46108 304 aa10.01□□□□□ -0.81
CNN3-205ENST00000474409 CCDC129Q6ZRS4 1044 aa10.01□□□□□ -0.81
CNN3-205ENST00000474409 KIAA1211Q6ZU35 1233 aa10.01□□□□□ -0.81
CNN3-205ENST00000474409 ADGRA1Q86SQ6 560 aa10.01□□□□□ -0.81
CNN3-205ENST00000474409 ZNF589Q86UQ0 364 aaPredicted RBP10.01□□□□□ -0.81
CNN3-205ENST00000474409 OGFOD1Q8N543 542 aa10.01□□□□□ -0.81
CNN3-205ENST00000474409 OSBP2Q969R2 916 aa10.01□□□□□ -0.81
CNN3-205ENST00000474409 SEC62Q99442 399 aaKnown RBP10.01□□□□□ -0.81
CNN3-205ENST00000474409 PUS7LQ9H0K6 701 aaKnown RBP10.01□□□□□ -0.81
CNN3-205ENST00000474409 IL25Q9H293 177 aa10.01□□□□□ -0.81
CNN3-205ENST00000474409 UPF2Q9HAU5 1272 aaKnown RBP10.01□□□□□ -0.81
CNN3-205ENST00000474409 ANO2Q9NQ90 1003 aa10.01□□□□□ -0.81
CNN3-205ENST00000474409 AATFQ9NY61 560 aaKnown RBP eCLIP10.01□□□□□ -0.81
CNN3-205ENST00000474409 DOCK1Q14185 1865 aa10□□□□□ -0.81
CNN3-205ENST00000474409 BAG3O95817 575 aa10□□□□□ -0.81
CNN3-205ENST00000474409 USP17L8P0C7I0 530 aa10□□□□□ -0.81
CNN3-205ENST00000474409 BTDP43251 543 aa10□□□□□ -0.81
CNN3-205ENST00000474409 GMPSP49915 693 aaPredicted RBP10□□□□□ -0.81
CNN3-205ENST00000474409 GPC2Q8N158 579 aa10□□□□□ -0.81
CNN3-205ENST00000474409 LCORLQ8N3X6 602 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms