RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 TNFAIP1Q13829 316 aa19.7■□□□□ 0.74
CDPF1-205ENST00000474256 SIL1Q9H173 461 aa19.7■□□□□ 0.74
CDPF1-205ENST00000474256 SUGT1Q9Y2Z0 365 aa19.7■□□□□ 0.74
CDPF1-205ENST00000474256 IPO8O15397 1037 aaKnown RBP19.69■□□□□ 0.74
CDPF1-205ENST00000474256 TRIM27P14373 513 aa19.69■□□□□ 0.74
CDPF1-205ENST00000474256 IL15P40933 162 aaPredicted RBP19.69■□□□□ 0.74
CDPF1-205ENST00000474256 SPRYD7Q5W111 196 aa19.69■□□□□ 0.74
CDPF1-205ENST00000474256 DIEXFQ68CQ4 756 aaKnown RBP19.69■□□□□ 0.74
CDPF1-205ENST00000474256 MCOLN1Q9GZU1 580 aa19.69■□□□□ 0.74
CDPF1-205ENST00000474256 COPRSQ9NQ92 184 aa19.69■□□□□ 0.74
CDPF1-205ENST00000474256 CEP126Q9P2H0 1117 aa19.69■□□□□ 0.74
CDPF1-205ENST00000474256 BCAR3O75815 825 aa19.68■□□□□ 0.74
CDPF1-205ENST00000474256 GNAI3P08754 354 aa19.68■□□□□ 0.74
CDPF1-205ENST00000474256 PA2G4Q9UQ80 394 aaKnown RBP19.68■□□□□ 0.74
CDPF1-205ENST00000474256 USP2O75604 605 aaPredicted RBP19.67■□□□□ 0.74
CDPF1-205ENST00000474256 SREBF2Q12772 1141 aa19.67■□□□□ 0.74
CDPF1-205ENST00000474256 MKRN3Q13064 507 aaKnown RBP19.67■□□□□ 0.74
CDPF1-205ENST00000474256 MTX1Q13505 466 aa19.67■□□□□ 0.74
CDPF1-205ENST00000474256 DGKZQ13574 1117 aa19.67■□□□□ 0.74
CDPF1-205ENST00000474256 ATP2B3Q16720 1220 aa19.67■□□□□ 0.74
CDPF1-205ENST00000474256 ATF7IPQ6VMQ6 1270 aa19.67■□□□□ 0.74
CDPF1-205ENST00000474256 TEKT1Q969V4 418 aa19.67■□□□□ 0.74
CDPF1-205ENST00000474256 SLC10A4Q96EP9 437 aa19.67■□□□□ 0.74
CDPF1-205ENST00000474256 ZDHHC15Q96MV8 337 aa19.67■□□□□ 0.74
CDPF1-205ENST00000474256 TEPSINQ96N21 525 aa19.67■□□□□ 0.74
CDPF1-205ENST00000474256 ARAP2Q8WZ64 1704 aa19.67■□□□□ 0.74
CDPF1-205ENST00000474256 ECM29Q5VYK3 1845 aa19.67■□□□□ 0.74
CDPF1-205ENST00000474256 WDR66Q8TBY9 1149 aa19.66■□□□□ 0.74
CDPF1-205ENST00000474256 CLMNQ96JQ2 1002 aa19.66■□□□□ 0.74
CDPF1-205ENST00000474256 TCP10L2B9ZVM9 353 aa19.65■□□□□ 0.74
CDPF1-205ENST00000474256 ZBTB48P10074 688 aaPredicted RBP19.65■□□□□ 0.74
CDPF1-205ENST00000474256 IREB2P48200 963 aaKnown RBP19.65■□□□□ 0.74
CDPF1-205ENST00000474256 TNNI2P48788 182 aa19.65■□□□□ 0.74
CDPF1-205ENST00000474256 HNRNPUQ00839 825 aaKnown RBP eCLIP19.65■□□□□ 0.74
CDPF1-205ENST00000474256 APOBEC3HQ6NTF7 200 aaKnown RBP19.65■□□□□ 0.74
CDPF1-205ENST00000474256 FRAT1Q92837 279 aaPredicted RBP19.65■□□□□ 0.74
CDPF1-205ENST00000474256 TNNQ9UQP3 1299 aa19.65■□□□□ 0.74
CDPF1-205ENST00000474256 MAST3O60307 1309 aa19.65■□□□□ 0.74
CDPF1-205ENST00000474256 CASP8AP2Q9UKL3 1982 aa19.64■□□□□ 0.74
CDPF1-205ENST00000474256 ZBTB22O15209 634 aa19.64■□□□□ 0.73
CDPF1-205ENST00000474256 SRGAP3O43295 1099 aa19.64■□□□□ 0.73
CDPF1-205ENST00000474256 TBC1D8O95759 1140 aa19.64■□□□□ 0.73
CDPF1-205ENST00000474256 HHIPL2Q6UWX4 724 aa19.64■□□□□ 0.73
CDPF1-205ENST00000474256 CDAN1Q8IWY9 1227 aa19.64■□□□□ 0.73
CDPF1-205ENST00000474256 CFHR5Q9BXR6 569 aa19.64■□□□□ 0.73
CDPF1-205ENST00000474256 TMEM39BQ9GZU3 492 aa19.64■□□□□ 0.73
CDPF1-205ENST00000474256 MANSC4A6NHS7 340 aaPredicted RBP19.63■□□□□ 0.73
CDPF1-205ENST00000474256 INHBEP58166 350 aa19.63■□□□□ 0.73
CDPF1-205ENST00000474256 ANKRD13AQ8IZ07 590 aa19.63■□□□□ 0.73
CDPF1-205ENST00000474256 WNK4Q96J92 1243 aa19.63■□□□□ 0.73
CDPF1-205ENST00000474256 GNL3LQ9NVN8 582 aaKnown RBP19.63■□□□□ 0.73
CDPF1-205ENST00000474256 CCDC85CA6NKD9 419 aa19.62■□□□□ 0.73
CDPF1-205ENST00000474256 SEMA3EO15041 775 aa19.62■□□□□ 0.73
CDPF1-205ENST00000474256 CACNB3P54284 484 aa19.62■□□□□ 0.73
CDPF1-205ENST00000474256 NOM1Q5C9Z4 860 aaKnown RBP19.62■□□□□ 0.73
CDPF1-205ENST00000474256 FKBP1CQ5VVH2 108 aa19.62■□□□□ 0.73
CDPF1-205ENST00000474256 CLUAP1Q96AJ1 413 aa19.62■□□□□ 0.73
CDPF1-205ENST00000474256 AKAP11Q9UKA4 1901 aa19.61■□□□□ 0.73
CDPF1-205ENST00000474256 SALL1Q9NSC2 1324 aa19.61■□□□□ 0.73
CDPF1-205ENST00000474256 GNAI2P04899 355 aa19.61■□□□□ 0.73
CDPF1-205ENST00000474256 ADORA1P30542 326 aa19.61■□□□□ 0.73
CDPF1-205ENST00000474256 PHKA1P46020 1223 aa19.61■□□□□ 0.73
CDPF1-205ENST00000474256 ZKSCAN2Q63HK3 967 aa19.61■□□□□ 0.73
CDPF1-205ENST00000474256 FAM83AQ86UY5 434 aa19.61■□□□□ 0.73
CDPF1-205ENST00000474256 DENND2AQ9ULE3 1009 aa19.61■□□□□ 0.73
CDPF1-205ENST00000474256 ALDH1A1P00352 501 aa19.6■□□□□ 0.73
CDPF1-205ENST00000474256 PRDX5P30044 214 aa19.6■□□□□ 0.73
CDPF1-205ENST00000474256 GJA5P36382 358 aa19.6■□□□□ 0.73
CDPF1-205ENST00000474256 TIMM10P62072 90 aa19.6■□□□□ 0.73
CDPF1-205ENST00000474256 CCDC102BQ68D86 513 aa19.6■□□□□ 0.73
CDPF1-205ENST00000474256 CTU1Q7Z7A3 348 aaKnown RBP19.6■□□□□ 0.73
CDPF1-205ENST00000474256 IFNL1Q8IU54 200 aa19.6■□□□□ 0.73
CDPF1-205ENST00000474256 ZNF296Q8WUU4 475 aaPredicted RBP19.6■□□□□ 0.73
CDPF1-205ENST00000474256 TMOD2Q9NZR1 351 aa19.6■□□□□ 0.73
CDPF1-205ENST00000474256 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.6■□□□□ 0.73
CDPF1-205ENST00000474256 GPR25O00155 361 aa19.59■□□□□ 0.73
CDPF1-205ENST00000474256 TFCP2Q12800 502 aa19.59■□□□□ 0.73
CDPF1-205ENST00000474256 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.59■□□□□ 0.73
CDPF1-205ENST00000474256 TMEM57Q8N5G2 664 aa19.59■□□□□ 0.73
CDPF1-205ENST00000474256 AKAP2Q9Y2D5 859 aa19.59■□□□□ 0.73
CDPF1-205ENST00000474256 DAGLAQ9Y4D2 1042 aa19.59■□□□□ 0.73
CDPF1-205ENST00000474256 LDHBP07195 334 aaKnown RBP19.58■□□□□ 0.72
CDPF1-205ENST00000474256 MAP3K9P80192 1104 aa19.58■□□□□ 0.72
CDPF1-205ENST00000474256 DIXDC1Q155Q3 683 aa19.58■□□□□ 0.72
CDPF1-205ENST00000474256 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.58■□□□□ 0.72
CDPF1-205ENST00000474256 R3HDMLQ9H3Y0 253 aa19.58■□□□□ 0.72
CDPF1-205ENST00000474256 PNMA6EA0A0J9YXQ4 647 aa19.57■□□□□ 0.72
CDPF1-205ENST00000474256 A0A1B0GUL7 405 aa19.57■□□□□ 0.72
CDPF1-205ENST00000474256 TESPA1A2RU30 521 aaPredicted RBP19.57■□□□□ 0.72
CDPF1-205ENST00000474256 IGF2BP3O00425 579 aaKnown RBP eCLIP19.57■□□□□ 0.72
CDPF1-205ENST00000474256 ELP3Q9H9T3 547 aa19.57■□□□□ 0.72
CDPF1-205ENST00000474256 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.57■□□□□ 0.72
CDPF1-205ENST00000474256 RPAP1Q9BWH6 1393 aaPredicted RBP19.57■□□□□ 0.72
CDPF1-205ENST00000474256 PDS5AQ29RF7 1337 aaKnown RBP19.56■□□□□ 0.72
CDPF1-205ENST00000474256 RGS19P49795 217 aa19.56■□□□□ 0.72
CDPF1-205ENST00000474256 RASGRF1Q13972 1273 aa19.56■□□□□ 0.72
CDPF1-205ENST00000474256 VGLL4Q14135 290 aa19.56■□□□□ 0.72
CDPF1-205ENST00000474256 CDC42EP5Q6NZY7 148 aa19.56■□□□□ 0.72
CDPF1-205ENST00000474256 OPTNQ96CV9 577 aa19.56■□□□□ 0.72
CDPF1-205ENST00000474256 XAGE2Q96GT9 111 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms