RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 BCL2L13Q9BXK5 485 aa8.85□□□□□ -0.99
GPNMB-209ENST00000474157 GRPEL1Q9HAV7 217 aa8.85□□□□□ -0.99
GPNMB-209ENST00000474157 RTEL1-TNFRSF6BF6WH68 1400 aa8.85□□□□□ -0.99
GPNMB-209ENST00000474157 VPS8Q8N3P4 1428 aa8.85□□□□□ -0.99
GPNMB-209ENST00000474157 IBTKQ9P2D0 1353 aaPredicted RBP8.85□□□□□ -0.99
GPNMB-209ENST00000474157 GPATCH8Q9UKJ3 1502 aaKnown RBP8.85□□□□□ -0.99
GPNMB-209ENST00000474157 PCSK2P16519 638 aa8.84□□□□□ -0.99
GPNMB-209ENST00000474157 GTF2F1P35269 517 aaKnown RBP eCLIP8.84□□□□□ -0.99
GPNMB-209ENST00000474157 USP5P45974 858 aa8.84□□□□□ -0.99
GPNMB-209ENST00000474157 TYRO3Q06418 890 aa8.84□□□□□ -0.99
GPNMB-209ENST00000474157 TRDNQ13061 729 aa8.84□□□□□ -0.99
GPNMB-209ENST00000474157 DDX10Q13206 875 aaKnown RBP8.84□□□□□ -0.99
GPNMB-209ENST00000474157 PDE3BQ13370 1112 aa8.84□□□□□ -0.99
GPNMB-209ENST00000474157 SKOR2Q2VWA4 1001 aaPredicted RBP8.84□□□□□ -0.99
GPNMB-209ENST00000474157 HSP90AB4PQ58FF6 505 aa8.84□□□□□ -0.99
GPNMB-209ENST00000474157 EFHC2Q5JST6 749 aa8.84□□□□□ -0.99
GPNMB-209ENST00000474157 GJD3Q8N144 294 aa8.84□□□□□ -0.99
GPNMB-209ENST00000474157 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.84□□□□□ -0.99
GPNMB-209ENST00000474157 CASKIN1Q8WXD9 1431 aa8.84□□□□□ -0.99
GPNMB-209ENST00000474157 C8orf37Q96NL8 207 aa8.84□□□□□ -0.99
GPNMB-209ENST00000474157 DONSONQ9NYP3 566 aa8.84□□□□□ -0.99
GPNMB-209ENST00000474157 GMPR2Q9P2T1 348 aaKnown RBP8.84□□□□□ -0.99
GPNMB-209ENST00000474157 USP20Q9Y2K6 914 aa8.84□□□□□ -0.99
GPNMB-209ENST00000474157 TIAM1Q13009 1591 aa8.83□□□□□ -1
GPNMB-209ENST00000474157 INO80Q9ULG1 1556 aaPredicted RBP8.83□□□□□ -1
GPNMB-209ENST00000474157 CCDC144AA2RUR9 1427 aa8.83□□□□□ -1
GPNMB-209ENST00000474157 SLC35F4A4IF30 521 aa8.83□□□□□ -1
GPNMB-209ENST00000474157 GPR182O15218 404 aa8.83□□□□□ -1
GPNMB-209ENST00000474157 INPP5BP32019 993 aa8.83□□□□□ -1
GPNMB-209ENST00000474157 TNNT3P45378 269 aaPredicted RBP8.83□□□□□ -1
GPNMB-209ENST00000474157 ZNF771Q7L3S4 317 aaPredicted RBP8.83□□□□□ -1
GPNMB-209ENST00000474157 NLRP8Q86W28 1048 aa8.83□□□□□ -1
GPNMB-209ENST00000474157 PIK3R5Q8WYR1 880 aa8.83□□□□□ -1
GPNMB-209ENST00000474157 DMRTB1Q96MA1 342 aa8.83□□□□□ -1
GPNMB-209ENST00000474157 CEP63Q96MT8 703 aa8.83□□□□□ -1
GPNMB-209ENST00000474157 PAIP2Q9BPZ3 127 aaKnown RBP8.83□□□□□ -1
GPNMB-209ENST00000474157 MED4Q9NPJ6 270 aa8.83□□□□□ -1
GPNMB-209ENST00000474157 ARHGAP23Q9P227 1491 aa8.83□□□□□ -1
GPNMB-209ENST00000474157 PHLPP1O60346 1717 aa8.83□□□□□ -1
GPNMB-209ENST00000474157 KIF16BQ96L93 1317 aa8.82□□□□□ -1
GPNMB-209ENST00000474157 PRDM15P57071 1507 aaPredicted RBP8.82□□□□□ -1
GPNMB-209ENST00000474157 MAP3K1Q13233 1512 aa8.82□□□□□ -1
GPNMB-209ENST00000474157 RBM47A0AV96 593 aaKnown RBP8.82□□□□□ -1
GPNMB-209ENST00000474157 TREHO43280 583 aa8.82□□□□□ -1
GPNMB-209ENST00000474157 IGHA2P01877 340 aa8.82□□□□□ -1
GPNMB-209ENST00000474157 YY1P25490 414 aa8.82□□□□□ -1
GPNMB-209ENST00000474157 C8orf34Q49A92 452 aa8.82□□□□□ -1
GPNMB-209ENST00000474157 Q6ZNB5 142 aa8.82□□□□□ -1
GPNMB-209ENST00000474157 GIPC2Q8TF65 315 aa8.82□□□□□ -1
GPNMB-209ENST00000474157 OGFRQ9NZT2 677 aa8.82□□□□□ -1
GPNMB-209ENST00000474157 POGKQ9P215 609 aa8.82□□□□□ -1
GPNMB-209ENST00000474157 CCNB3Q8WWL7 1395 aa8.82□□□□□ -1
GPNMB-209ENST00000474157 NCOA2Q15596 1464 aa8.82□□□□□ -1
GPNMB-209ENST00000474157 ZC3H13Q5T200 1668 aaKnown RBP8.81□□□□□ -1
GPNMB-209ENST00000474157 ZNF644Q9H582 1327 aaPredicted RBP8.81□□□□□ -1
GPNMB-209ENST00000474157 CDC42BPAQ5VT25 1732 aa8.81□□□□□ -1
GPNMB-209ENST00000474157 A6NHS1 94 aa8.81□□□□□ -1
GPNMB-209ENST00000474157 E9PSI1 815 aa8.81□□□□□ -1
GPNMB-209ENST00000474157 P4HBP07237 508 aaKnown RBP8.81□□□□□ -1
GPNMB-209ENST00000474157 THBS1P07996 1170 aa8.81□□□□□ -1
GPNMB-209ENST00000474157 ZNF853P0CG23 659 aa8.81□□□□□ -1
GPNMB-209ENST00000474157 ATF3P18847 181 aa8.81□□□□□ -1
GPNMB-209ENST00000474157 SAMD5Q5TGI4 173 aa8.81□□□□□ -1
GPNMB-209ENST00000474157 CMTR1Q8N1G2 835 aaKnown RBP8.81□□□□□ -1
GPNMB-209ENST00000474157 CCDC155Q8N6L0 562 aa8.81□□□□□ -1
GPNMB-209ENST00000474157 GGNBP2Q9H3C7 697 aa8.81□□□□□ -1
GPNMB-209ENST00000474157 RTCBQ9Y3I0 505 aaKnown RBP8.81□□□□□ -1
GPNMB-209ENST00000474157 TMEM2Q9UHN6 1383 aa8.81□□□□□ -1
GPNMB-209ENST00000474157 CCDC18Q5T9S5 1454 aa8.81□□□□□ -1
GPNMB-209ENST00000474157 SLIT1O75093 1534 aa8.8□□□□□ -1
GPNMB-209ENST00000474157 COL16A1Q07092 1604 aaPredicted RBP8.8□□□□□ -1
GPNMB-209ENST00000474157 SNRPBP14678 240 aaKnown RBP8.8□□□□□ -1
GPNMB-209ENST00000474157 EPB42P16452 691 aa8.8□□□□□ -1
GPNMB-209ENST00000474157 LIG1P18858 919 aa8.8□□□□□ -1
GPNMB-209ENST00000474157 GTF2A1P52655 376 aaPredicted RBP8.8□□□□□ -1
GPNMB-209ENST00000474157 FMR1Q06787 632 aaKnown RBP eCLIP8.8□□□□□ -1
GPNMB-209ENST00000474157 HDAC1Q13547 482 aaPredicted RBP8.8□□□□□ -1
GPNMB-209ENST00000474157 LBRQ14739 615 aaKnown RBP8.8□□□□□ -1
GPNMB-209ENST00000474157 COL19A1Q14993 1142 aa8.8□□□□□ -1
GPNMB-209ENST00000474157 FBXO33Q7Z6M2 555 aa8.8□□□□□ -1
GPNMB-209ENST00000474157 TTC16Q8NEE8 873 aa8.8□□□□□ -1
GPNMB-209ENST00000474157 MYRIPQ8NFW9 859 aa8.8□□□□□ -1
GPNMB-209ENST00000474157 ITFG2Q969R8 447 aa8.8□□□□□ -1
GPNMB-209ENST00000474157 LRRC59Q96AG4 307 aaKnown RBP8.8□□□□□ -1
GPNMB-209ENST00000474157 ZCCHC2Q9C0B9 1178 aaKnown RBP8.8□□□□□ -1
GPNMB-209ENST00000474157 NUCKS1Q9H1E3 243 aaKnown RBP8.8□□□□□ -1
GPNMB-209ENST00000474157 BRD7Q9NPI1 651 aa8.8□□□□□ -1
GPNMB-209ENST00000474157 FEZ2Q9UHY8 353 aaPredicted RBP8.8□□□□□ -1
GPNMB-209ENST00000474157 NOL7Q9UMY1 257 aaKnown RBP8.8□□□□□ -1
GPNMB-209ENST00000474157 R3HCC1Q9Y3T6 440 aaKnown RBP8.8□□□□□ -1
GPNMB-209ENST00000474157 MRVI1Q9Y6F6 885 aa8.8□□□□□ -1
GPNMB-209ENST00000474157 ERVK-7P63135 1459 aa8.8□□□□□ -1
GPNMB-209ENST00000474157 ABCC3O15438 1527 aa8.8□□□□□ -1
GPNMB-209ENST00000474157 NKTRP30414 1462 aaKnown RBP8.79□□□□□ -1
GPNMB-209ENST00000474157 RPLP1P05386 114 aaKnown RBP8.79□□□□□ -1
GPNMB-209ENST00000474157 ZNF16P17020 682 aaPredicted RBP8.79□□□□□ -1
GPNMB-209ENST00000474157 GRNP28799 593 aaKnown RBP8.79□□□□□ -1
GPNMB-209ENST00000474157 EHHADHQ08426 723 aa8.79□□□□□ -1
GPNMB-209ENST00000474157 DSC3Q14574 896 aa8.79□□□□□ -1
GPNMB-209ENST00000474157 TRIP4Q15650 581 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms