RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CAP1Q01518 475 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 CRHR2Q13324 411 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 CWF19L2Q2TBE0 894 aaKnown RBP6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 CCDC30Q5VVM6 783 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 KSR2Q6VAB6 950 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 CERS5Q8N5B7 392 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 PI4KAP1Q8N8J0 262 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 MTMR14Q8NCE2 650 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 CD99L2Q8TCZ2 262 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 SLC10A4Q96EP9 437 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 TMEM121BQ9BXQ6 578 aaPredicted RBP6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 PCDHAC2Q9Y5I4 1007 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 CUL9Q8IWT3 2517 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 AOX1Q06278 1338 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 CLRN2A0PK11 232 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 TESPA1A2RU30 521 aaPredicted RBP6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 UNCXA6NJT0 531 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 APAF1O14727 1248 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 RIOK3O14730 519 aaKnown RBP6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 EN2P19622 333 aaPredicted RBP6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 ITGA6P23229 1130 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 IGHMBP2P38935 993 aaKnown RBP6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 CASP7P55210 303 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 CALD1Q05682 793 aaKnown RBP6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 CHRNDQ07001 517 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 DLGAP5Q15398 846 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 UBE3BQ7Z3V4 1068 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 TSPYL6Q8N831 410 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 SLC17A8Q8NDX2 589 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 ERO1AQ96HE7 468 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 PTPN18Q99952 460 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 PLA2G12BQ9BX93 195 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 ANKRD2Q9GZV1 360 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 EFCC1Q9HA90 598 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 CD209Q9NNX6 404 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 PTPN22Q9Y2R2 807 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 PPP2R3BQ9Y5P8 575 aa6.59□□□□□ -1.35
SNRNP40-204ENST00000474025 ECM29Q5VYK3 1845 aa6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 H7C1W4 665 aa6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 SNAP23O00161 211 aa6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 CSF1RP07333 972 aa6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 KCNJ4P48050 445 aa6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 IREB2P48200 963 aaKnown RBP6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 SP3Q02447 781 aa6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 NEXNQ0ZGT2 675 aa6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 SUPT20HL1Q3ZLR7 823 aa6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 CFAP100Q494V2 611 aa6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 NBPF12Q5TAG4 269 aaPredicted RBP6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 C15orf52Q6ZUT6 534 aaKnown RBP6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 RNF25Q96BH1 459 aaPredicted RBP6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 ZNF333Q96JL9 665 aa6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 MPHOSPH8Q99549 860 aa6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 CHMP4AQ9BY43 222 aa6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 OTOFQ9HC10 1997 aa6.58□□□□□ -1.36
SNRNP40-204ENST00000474025 A0A1B0GUL6 1792 aa6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 PRUNE2Q8WUY3 3088 aa6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 F8W031 263 aaPredicted RBP6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 MYO1BO43795 1136 aa6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 USP2O75604 605 aaPredicted RBP6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 IL1R1P14778 569 aa6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 FKBP1AP62942 108 aaKnown RBP6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 GCKRQ14397 625 aa6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 RASA3Q14644 834 aa6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 ARHGEF6Q15052 776 aa6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 OTUD7BQ6GQQ9 843 aa6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 G2E3Q7L622 706 aa6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 ANKRD13AQ8IZ07 590 aa6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 BRI3BPQ8WY22 251 aa6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 MS4A4AQ96JQ5 239 aa6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 PRMT6Q96LA8 375 aaPredicted RBP6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 VEZTQ9HBM0 779 aa6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 BOLA1Q9Y3E2 137 aa6.57□□□□□ -1.36
SNRNP40-204ENST00000474025 TAF5LO75529 589 aa6.56□□□□□ -1.36
SNRNP40-204ENST00000474025 DDX10Q13206 875 aaKnown RBP6.56□□□□□ -1.36
SNRNP40-204ENST00000474025 SLC9C1Q4G0N8 1177 aa6.56□□□□□ -1.36
SNRNP40-204ENST00000474025 ZNF804AQ7Z570 1209 aa6.56□□□□□ -1.36
SNRNP40-204ENST00000474025 CDAN1Q8IWY9 1227 aa6.56□□□□□ -1.36
SNRNP40-204ENST00000474025 EFCAB3Q8N7B9 438 aa6.56□□□□□ -1.36
SNRNP40-204ENST00000474025 HELBQ8NG08 1087 aaPredicted RBP6.56□□□□□ -1.36
SNRNP40-204ENST00000474025 TSR2Q969E8 191 aaKnown RBP6.56□□□□□ -1.36
SNRNP40-204ENST00000474025 OPTNQ96CV9 577 aa6.56□□□□□ -1.36
SNRNP40-204ENST00000474025 STK31Q9BXU1 1019 aa6.56□□□□□ -1.36
SNRNP40-204ENST00000474025 MYH16Q9H6N6 1097 aa6.56□□□□□ -1.36
SNRNP40-204ENST00000474025 ELP3Q9H9T3 547 aa6.56□□□□□ -1.36
SNRNP40-204ENST00000474025 JAG2Q9Y219 1238 aa6.56□□□□□ -1.36
SNRNP40-204ENST00000474025 PTCH2Q9Y6C5 1203 aa6.56□□□□□ -1.36
SNRNP40-204ENST00000474025 SPTBN5Q9NRC6 3674 aaKnown RBP6.55□□□□□ -1.36
SNRNP40-204ENST00000474025 ANKRD18BA2A2Z9 1011 aa6.55□□□□□ -1.36
SNRNP40-204ENST00000474025 FOXO4P98177 505 aa6.55□□□□□ -1.36
SNRNP40-204ENST00000474025 FLIIQ13045 1269 aa6.55□□□□□ -1.36
SNRNP40-204ENST00000474025 TNFAIP1Q13829 316 aa6.55□□□□□ -1.36
SNRNP40-204ENST00000474025 VGLL4Q14135 290 aa6.55□□□□□ -1.36
SNRNP40-204ENST00000474025 TAF1CQ15572 869 aaPredicted RBP6.55□□□□□ -1.36
SNRNP40-204ENST00000474025 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.55□□□□□ -1.36
SNRNP40-204ENST00000474025 NBPF11Q86T75 865 aa6.55□□□□□ -1.36
SNRNP40-204ENST00000474025 LINS1Q8NG48 757 aa6.55□□□□□ -1.36
SNRNP40-204ENST00000474025 TEPSINQ96N21 525 aa6.55□□□□□ -1.36
SNRNP40-204ENST00000474025 MUC3AQ02505 3323 aa6.55□□□□□ -1.36
SNRNP40-204ENST00000474025 FAM205AQ6ZU69 1335 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms