RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 SIL1Q9H173 461 aa5.44□□□□□ -1.54
U2SURP-208ENST00000473835 FAN1Q9Y2M0 1017 aa5.44□□□□□ -1.54
U2SURP-208ENST00000473835 NDUFB9Q9Y6M9 179 aa5.44□□□□□ -1.54
U2SURP-208ENST00000473835 ADAMTS7Q9UKP4 1686 aa5.44□□□□□ -1.54
U2SURP-208ENST00000473835 SIPA1L3O60292 1781 aaPredicted RBP5.44□□□□□ -1.54
U2SURP-208ENST00000473835 SYF2O95926 243 aaKnown RBP5.43□□□□□ -1.54
U2SURP-208ENST00000473835 PFKFB1P16118 471 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 PDIA3P30101 505 aaKnown RBP5.43□□□□□ -1.54
U2SURP-208ENST00000473835 MTF1Q14872 753 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 PLPPR3Q6T4P5 718 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 HOMER1Q86YM7 354 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 FBXL16Q8N461 479 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 BOLA2Q9H3K6 86 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 A0A1B0GUL7 405 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 H3BQV1 296 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 CCP110O43303 1012 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 HOXB7P09629 217 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 ME1P48163 572 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 CWF19L2Q2TBE0 894 aaKnown RBP5.43□□□□□ -1.54
U2SURP-208ENST00000473835 IFFO2Q5TF58 517 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 WWC2Q6AWC2 1192 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.43□□□□□ -1.54
U2SURP-208ENST00000473835 CLIC6Q96NY7 704 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 TEX13AQ9BXU3 409 aaPredicted RBP5.43□□□□□ -1.54
U2SURP-208ENST00000473835 ABCB6Q9NP58 842 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 ZNF202O95125 648 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 ABL1P00519 1130 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 PRR29P0C7W0 189 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 GTF2A1P52655 376 aaPredicted RBP5.43□□□□□ -1.54
U2SURP-208ENST00000473835 METTL16Q86W50 562 aaKnown RBP5.43□□□□□ -1.54
U2SURP-208ENST00000473835 SLC26A8Q96RN1 970 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 VPS18Q9P253 973 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 PXDNQ92626 1479 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 FOSBP53539 338 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 DHX8Q14562 1220 aaKnown RBP5.43□□□□□ -1.54
U2SURP-208ENST00000473835 PLEKHO1Q53GL0 409 aaPredicted RBP5.43□□□□□ -1.54
U2SURP-208ENST00000473835 OTUD7BQ6GQQ9 843 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 KCNV1Q6PIU1 500 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 KLHDC4Q8TBB5 520 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 FSD1Q9BTV5 496 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 DBNLQ9UJU6 430 aaKnown RBP5.43□□□□□ -1.54
U2SURP-208ENST00000473835 BCL9LQ86UU0 1499 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 RFX5P48382 616 aaPredicted RBP5.43□□□□□ -1.54
U2SURP-208ENST00000473835 KRT32Q14532 448 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 DNAJC5Q9H3Z4 198 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 BICC1Q9H694 974 aaKnown RBP5.43□□□□□ -1.54
U2SURP-208ENST00000473835 HPS5Q9UPZ3 1129 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 ANKRD65E5RJM6 399 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 STX10O60499 249 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 VSNL1P62760 191 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 GPS2Q13227 327 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 SHC4Q6S5L8 630 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 GOLGA1Q92805 767 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 AK7Q96M32 723 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.43□□□□□ -1.54
U2SURP-208ENST00000473835 GJB4Q9NTQ9 266 aa5.43□□□□□ -1.54
U2SURP-208ENST00000473835 CWC15Q9P013 229 aaKnown RBP5.43□□□□□ -1.54
U2SURP-208ENST00000473835 YEATS4O95619 227 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 CT47A1Q5JQC4 288 aaPredicted RBP5.42□□□□□ -1.54
U2SURP-208ENST00000473835 EPHA10Q5JZY3 1008 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 SRGAP1Q7Z6B7 1085 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 THEMISQ8N1K5 641 aaPredicted RBP5.42□□□□□ -1.54
U2SURP-208ENST00000473835 FANCLQ9NW38 375 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 SHOX2O60902 331 aaPredicted RBP5.42□□□□□ -1.54
U2SURP-208ENST00000473835 CMA1P23946 247 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 AARSP49588 968 aaKnown RBP eCLIP5.42□□□□□ -1.54
U2SURP-208ENST00000473835 GUCY1B3Q02153 619 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 PTPAQ15257 358 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 ZNF396Q96N95 335 aaPredicted RBP5.42□□□□□ -1.54
U2SURP-208ENST00000473835 MAP3K14Q99558 947 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 DESI2Q9BSY9 194 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 LGR6Q9HBX8 967 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 ZSCAN12O43309 604 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 IVLP07476 585 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 FECHP22830 423 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 HOXC9P31274 260 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 GNG11P61952 73 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 SART3Q15020 963 aaKnown RBP5.42□□□□□ -1.54
U2SURP-208ENST00000473835 RAD9BQ6WBX8 426 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 PLEKHA4Q9H4M7 779 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 PRAMEF22A3QJZ6 481 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 PBX1P40424 430 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 UBASH3AP57075 661 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 DHX32Q7L7V1 743 aaKnown RBP5.42□□□□□ -1.54
U2SURP-208ENST00000473835 BAG1Q99933 345 aaPredicted RBP5.42□□□□□ -1.54
U2SURP-208ENST00000473835 GPHNQ9NQX3 736 aaPredicted RBP5.42□□□□□ -1.54
U2SURP-208ENST00000473835 C5P01031 1676 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 SH3TC1Q8TE82 1336 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 IGKV5-2P06315 115 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 SLC3A2P08195 630 aaKnown RBP5.42□□□□□ -1.54
U2SURP-208ENST00000473835 ATP5JP18859 108 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 AMPD2Q01433 879 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 MYL5Q02045 173 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 FMR1Q06787 632 aaKnown RBP eCLIP5.42□□□□□ -1.54
U2SURP-208ENST00000473835 PDIA6Q15084 440 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 TTC31Q49AM3 519 aaPredicted RBP5.42□□□□□ -1.54
U2SURP-208ENST00000473835 MYSM1Q5VVJ2 828 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 JAKMIP3Q5VZ66 844 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 NKX2-3Q8TAU0 364 aa5.42□□□□□ -1.54
U2SURP-208ENST00000473835 FMNL2Q96PY5 1086 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms