RNA–Protein interactions for RNA: ENST00000473517.1

SATB2-208, Transcript of SATB homeobox 2, humanhuman

TSL 3

Gene SATB2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-208ENST00000473517 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.74□□□□□ -0.69
SATB2-208ENST00000473517 PRMT6Q96LA8 375 aaPredicted RBP10.74□□□□□ -0.69
SATB2-208ENST00000473517 C11orf49Q9H6J7 331 aa10.74□□□□□ -0.69
SATB2-208ENST00000473517 GABRQQ9UN88 632 aa10.74□□□□□ -0.69
SATB2-208ENST00000473517 HCN4Q9Y3Q4 1203 aa10.74□□□□□ -0.69
SATB2-208ENST00000473517 IRF6O14896 467 aa10.73□□□□□ -0.69
SATB2-208ENST00000473517 ELNP15502 786 aa10.73□□□□□ -0.69
SATB2-208ENST00000473517 FLT3LGP49771 235 aa10.73□□□□□ -0.69
SATB2-208ENST00000473517 EIF4G2P78344 907 aaKnown RBP eCLIP10.73□□□□□ -0.69
SATB2-208ENST00000473517 GTF2IP78347 998 aa10.73□□□□□ -0.69
SATB2-208ENST00000473517 MDM2Q00987 491 aaPredicted RBP10.73□□□□□ -0.69
SATB2-208ENST00000473517 TRIM28Q13263 835 aaKnown RBP10.73□□□□□ -0.69
SATB2-208ENST00000473517 CFAP100Q494V2 611 aa10.73□□□□□ -0.69
SATB2-208ENST00000473517 CCDC152Q4G0S7 254 aa10.73□□□□□ -0.69
SATB2-208ENST00000473517 RTL5Q5HYW3 569 aaPredicted RBP10.73□□□□□ -0.69
SATB2-208ENST00000473517 ANKRD23Q86SG2 305 aa10.73□□□□□ -0.69
SATB2-208ENST00000473517 ANKRD18AQ8IVF6 992 aa10.73□□□□□ -0.69
SATB2-208ENST00000473517 NUDCQ9Y266 331 aa10.73□□□□□ -0.69
SATB2-208ENST00000473517 ALPK3Q96L96 1907 aa10.72□□□□□ -0.69
SATB2-208ENST00000473517 BCRP11274 1271 aa10.72□□□□□ -0.69
SATB2-208ENST00000473517 PPIL2Q13356 520 aa10.72□□□□□ -0.69
SATB2-208ENST00000473517 PLBD2Q8NHP8 589 aa10.72□□□□□ -0.69
SATB2-208ENST00000473517 ATXN2LQ8WWM7 1075 aaKnown RBP10.72□□□□□ -0.69
SATB2-208ENST00000473517 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.72□□□□□ -0.69
SATB2-208ENST00000473517 PCDHAC2Q9Y5I4 1007 aa10.72□□□□□ -0.69
SATB2-208ENST00000473517 ATP5J2-PTCD1G3V325 749 aa10.71□□□□□ -0.69
SATB2-208ENST00000473517 PDHXO00330 501 aa10.71□□□□□ -0.69
SATB2-208ENST00000473517 NCOR1O75376 2440 aa10.71□□□□□ -0.69
SATB2-208ENST00000473517 CCT4P50991 539 aaKnown RBP10.71□□□□□ -0.69
SATB2-208ENST00000473517 CC2D1BQ5T0F9 858 aaKnown RBP10.71□□□□□ -0.69
SATB2-208ENST00000473517 TEPSINQ96N21 525 aa10.71□□□□□ -0.69
SATB2-208ENST00000473517 TTYH1Q9H313 450 aaPredicted RBP10.71□□□□□ -0.69
SATB2-208ENST00000473517 U2AF1L5P0DN76 240 aaPredicted RBP10.7□□□□□ -0.7
SATB2-208ENST00000473517 U2AF1Q01081 240 aaKnown RBP eCLIP10.7□□□□□ -0.7
SATB2-208ENST00000473517 TXNRD3Q86VQ6 643 aa10.7□□□□□ -0.7
SATB2-208ENST00000473517 ZBTB38Q8NAP3 1195 aaPredicted RBP10.7□□□□□ -0.7
SATB2-208ENST00000473517 LBHD1Q9BQE6 289 aaPredicted RBP10.7□□□□□ -0.7
SATB2-208ENST00000473517 BSDC1Q9NW68 430 aaPredicted RBP10.7□□□□□ -0.7
SATB2-208ENST00000473517 MINPP1Q9UNW1 487 aa10.7□□□□□ -0.7
SATB2-208ENST00000473517 LEMD3Q9Y2U8 911 aa10.7□□□□□ -0.7
SATB2-208ENST00000473517 SNCAIPQ9Y6H5 919 aa10.7□□□□□ -0.7
SATB2-208ENST00000473517 PPATQ06203 517 aa10.69□□□□□ -0.7
SATB2-208ENST00000473517 SPDYE2Q495Y8 402 aa10.69□□□□□ -0.7
SATB2-208ENST00000473517 ALYREFQ86V81 257 aaKnown RBP10.69□□□□□ -0.7
SATB2-208ENST00000473517 CERS5Q8N5B7 392 aa10.69□□□□□ -0.7
SATB2-208ENST00000473517 ADAMTS19Q8TE59 1207 aa10.69□□□□□ -0.7
SATB2-208ENST00000473517 CFAP53Q96M91 514 aa10.69□□□□□ -0.7
SATB2-208ENST00000473517 UHRF1Q96T88 793 aaPredicted RBP10.69□□□□□ -0.7
SATB2-208ENST00000473517 CDC5LQ99459 802 aaKnown RBP10.69□□□□□ -0.7
SATB2-208ENST00000473517 PARK7Q99497 189 aaKnown RBP10.69□□□□□ -0.7
SATB2-208ENST00000473517 OGDHLQ9ULD0 1010 aa10.69□□□□□ -0.7
SATB2-208ENST00000473517 AOX1Q06278 1338 aa10.68□□□□□ -0.7
SATB2-208ENST00000473517 PER1O15534 1290 aaPredicted RBP10.68□□□□□ -0.7
SATB2-208ENST00000473517 PDE8AO60658 829 aa10.68□□□□□ -0.7
SATB2-208ENST00000473517 FKBP1AP62942 108 aaKnown RBP10.68□□□□□ -0.7
SATB2-208ENST00000473517 SMAD3P84022 425 aaKnown RBP10.68□□□□□ -0.7
SATB2-208ENST00000473517 CDAN1Q8IWY9 1227 aa10.68□□□□□ -0.7
SATB2-208ENST00000473517 USP38Q8NB14 1042 aa10.68□□□□□ -0.7
SATB2-208ENST00000473517 ASB2Q96Q27 587 aa10.68□□□□□ -0.7
SATB2-208ENST00000473517 ZNF70Q9UC06 446 aaPredicted RBP10.68□□□□□ -0.7
SATB2-208ENST00000473517 PFASO15067 1338 aa10.67□□□□□ -0.7
SATB2-208ENST00000473517 F8W031 263 aaPredicted RBP10.67□□□□□ -0.7
SATB2-208ENST00000473517 TNPO2O14787 897 aaKnown RBP10.67□□□□□ -0.7
SATB2-208ENST00000473517 TNNI2P48788 182 aa10.67□□□□□ -0.7
SATB2-208ENST00000473517 RBM5P52756 815 aaKnown RBP eCLIP10.67□□□□□ -0.7
SATB2-208ENST00000473517 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.67□□□□□ -0.7
SATB2-208ENST00000473517 CCDC85AQ96PX6 553 aaPredicted RBP10.67□□□□□ -0.7
SATB2-208ENST00000473517 CD209Q9NNX6 404 aa10.67□□□□□ -0.7
SATB2-208ENST00000473517 HMX1Q9NP08 348 aaPredicted RBP10.67□□□□□ -0.7
SATB2-208ENST00000473517 TSPYL4Q9UJ04 414 aa10.67□□□□□ -0.7
SATB2-208ENST00000473517 OTOFQ9HC10 1997 aa10.66□□□□□ -0.7
SATB2-208ENST00000473517 CACNA1AO00555 2505 aa10.66□□□□□ -0.7
SATB2-208ENST00000473517 COL6A1P12109 1028 aa10.66□□□□□ -0.7
SATB2-208ENST00000473517 ZKSCAN4Q969J2 545 aaPredicted RBP10.66□□□□□ -0.7
SATB2-208ENST00000473517 WRNIP1Q96S55 665 aa10.66□□□□□ -0.7
SATB2-208ENST00000473517 LRFN3Q9BTN0 628 aa10.66□□□□□ -0.7
SATB2-208ENST00000473517 TMEM39BQ9GZU3 492 aa10.66□□□□□ -0.7
SATB2-208ENST00000473517 KCNH4Q9UQ05 1017 aa10.66□□□□□ -0.7
SATB2-208ENST00000473517 HMGCRP04035 888 aa10.65□□□□□ -0.7
SATB2-208ENST00000473517 CYP2C8P10632 490 aa10.65□□□□□ -0.7
SATB2-208ENST00000473517 MRPS5P82675 430 aaKnown RBP10.65□□□□□ -0.7
SATB2-208ENST00000473517 MOGSQ13724 837 aa10.65□□□□□ -0.7
SATB2-208ENST00000473517 LRRC26Q2I0M4 334 aa10.65□□□□□ -0.7
SATB2-208ENST00000473517 COA7Q96BR5 231 aa10.65□□□□□ -0.7
SATB2-208ENST00000473517 P2RX7Q99572 595 aaKnown RBP10.65□□□□□ -0.7
SATB2-208ENST00000473517 BABAM1Q9NWV8 329 aa10.65□□□□□ -0.7
SATB2-208ENST00000473517 TAOK2Q9UL54 1235 aa10.65□□□□□ -0.7
SATB2-208ENST00000473517 BDP1A6H8Y1 2624 aa10.65□□□□□ -0.71
SATB2-208ENST00000473517 TCP10L2B9ZVM9 353 aa10.64□□□□□ -0.71
SATB2-208ENST00000473517 PCCAP05165 728 aaPredicted RBP10.64□□□□□ -0.71
SATB2-208ENST00000473517 NEFMP07197 916 aa10.64□□□□□ -0.71
SATB2-208ENST00000473517 HSPA5P11021 654 aaKnown RBP10.64□□□□□ -0.71
SATB2-208ENST00000473517 KLRK1P26718 216 aa10.64□□□□□ -0.71
SATB2-208ENST00000473517 SHHQ15465 462 aa10.64□□□□□ -0.71
SATB2-208ENST00000473517 IL27Q8NEV9 243 aa10.64□□□□□ -0.71
SATB2-208ENST00000473517 HOOK2Q96ED9 719 aa10.64□□□□□ -0.71
SATB2-208ENST00000473517 ANKRD2Q9GZV1 360 aa10.64□□□□□ -0.71
SATB2-208ENST00000473517 TDRD3Q9H7E2 651 aaKnown RBP10.64□□□□□ -0.71
SATB2-208ENST00000473517 FOXD4L1Q9NU39 408 aa10.64□□□□□ -0.71
SATB2-208ENST00000473517 THEGQ9P2T0 379 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms