RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 REM2Q8IYK8 340 aaPredicted RBP24.05■■□□□ 1.44
COMMD1-208ENST00000472729 NEUROD6Q96NK8 337 aa24.05■■□□□ 1.44
COMMD1-208ENST00000472729 TDRD3Q9H7E2 651 aaKnown RBP24.05■■□□□ 1.44
COMMD1-208ENST00000472729 DENND2AQ9ULE3 1009 aa24.05■■□□□ 1.44
COMMD1-208ENST00000472729 PSME4Q14997 1843 aa24.05■■□□□ 1.44
COMMD1-208ENST00000472729 SEMA3EO15041 775 aa24.04■■□□□ 1.44
COMMD1-208ENST00000472729 KIF23Q02241 960 aaPredicted RBP24.04■■□□□ 1.44
COMMD1-208ENST00000472729 TFCP2Q12800 502 aa24.04■■□□□ 1.44
COMMD1-208ENST00000472729 MOB2Q70IA6 237 aa24.04■■□□□ 1.44
COMMD1-208ENST00000472729 ZNF70Q9UC06 446 aaPredicted RBP24.04■■□□□ 1.44
COMMD1-208ENST00000472729 ANGEL1Q9UNK9 670 aaKnown RBP24.04■■□□□ 1.44
COMMD1-208ENST00000472729 COL1A1P02452 1464 aaPredicted RBP24.03■■□□□ 1.44
COMMD1-208ENST00000472729 SLC10A3P09131 477 aa24.03■■□□□ 1.44
COMMD1-208ENST00000472729 RASA3Q14644 834 aa24.03■■□□□ 1.44
COMMD1-208ENST00000472729 MVPQ14764 893 aaKnown RBP24.03■■□□□ 1.44
COMMD1-208ENST00000472729 FAM155AB1AL88 458 aaPredicted RBP24.02■■□□□ 1.44
COMMD1-208ENST00000472729 HSPA8P11142 646 aaKnown RBP24.02■■□□□ 1.44
COMMD1-208ENST00000472729 TIMM10P62072 90 aa24.02■■□□□ 1.44
COMMD1-208ENST00000472729 SPDYE2Q495Y8 402 aa24.02■■□□□ 1.44
COMMD1-208ENST00000472729 ZGPATQ8N5A5 531 aaKnown RBP24.02■■□□□ 1.44
COMMD1-208ENST00000472729 MRIQ9BWK5 157 aa24.02■■□□□ 1.44
COMMD1-208ENST00000472729 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.02■■□□□ 1.44
COMMD1-208ENST00000472729 A0A1B0GUL7 405 aa24.01■■□□□ 1.43
COMMD1-208ENST00000472729 TCP10L2B9ZVM9 353 aa24.01■■□□□ 1.43
COMMD1-208ENST00000472729 LDHBP07195 334 aaKnown RBP24.01■■□□□ 1.43
COMMD1-208ENST00000472729 CCDC102BQ68D86 513 aa24.01■■□□□ 1.43
COMMD1-208ENST00000472729 PNMA6EA0A0J9YXQ4 647 aa24■■□□□ 1.43
COMMD1-208ENST00000472729 IREB2P48200 963 aaKnown RBP24■■□□□ 1.43
COMMD1-208ENST00000472729 RASAL3Q86YV0 1011 aa24■■□□□ 1.43
COMMD1-208ENST00000472729 ZDHHC15Q96MV8 337 aa24■■□□□ 1.43
COMMD1-208ENST00000472729 TSKSQ9UJT2 592 aa24■■□□□ 1.43
COMMD1-208ENST00000472729 PHKA1P46020 1223 aa23.99■■□□□ 1.43
COMMD1-208ENST00000472729 ATP8B2P98198 1209 aa23.99■■□□□ 1.43
COMMD1-208ENST00000472729 GRIK5Q16478 980 aa23.99■■□□□ 1.43
COMMD1-208ENST00000472729 HHIPL2Q6UWX4 724 aa23.99■■□□□ 1.43
COMMD1-208ENST00000472729 SLC10A4Q96EP9 437 aa23.99■■□□□ 1.43
COMMD1-208ENST00000472729 XAGE2Q96GT9 111 aa23.99■■□□□ 1.43
COMMD1-208ENST00000472729 C1orf115Q9H7X2 142 aa23.99■■□□□ 1.43
COMMD1-208ENST00000472729 ZBTB7BO15156 539 aaPredicted RBP23.98■■□□□ 1.43
COMMD1-208ENST00000472729 SURF6O75683 361 aaKnown RBP23.98■■□□□ 1.43
COMMD1-208ENST00000472729 ADORA1P30542 326 aa23.98■■□□□ 1.43
COMMD1-208ENST00000472729 ZIC5Q96T25 663 aa23.98■■□□□ 1.43
COMMD1-208ENST00000472729 RCAN3Q9UKA8 241 aa23.98■■□□□ 1.43
COMMD1-208ENST00000472729 RLBP1P12271 317 aa23.97■■□□□ 1.43
COMMD1-208ENST00000472729 NBPF12Q5TAG4 269 aaPredicted RBP23.97■■□□□ 1.43
COMMD1-208ENST00000472729 SPTY2D1Q68D10 685 aaPredicted RBP23.97■■□□□ 1.43
COMMD1-208ENST00000472729 SLF2Q8IX21 1173 aa23.97■■□□□ 1.43
COMMD1-208ENST00000472729 PANK1Q8TE04 598 aa23.97■■□□□ 1.43
COMMD1-208ENST00000472729 HOOK2Q96ED9 719 aa23.97■■□□□ 1.43
COMMD1-208ENST00000472729 CHMP4BQ9H444 224 aaKnown RBP23.97■■□□□ 1.43
COMMD1-208ENST00000472729 ABCF2Q9UG63 623 aa23.97■■□□□ 1.43
COMMD1-208ENST00000472729 MKRN3Q13064 507 aaKnown RBP23.96■■□□□ 1.43
COMMD1-208ENST00000472729 DZIP1Q86YF9 867 aaKnown RBP23.96■■□□□ 1.43
COMMD1-208ENST00000472729 CSRNP1Q96S65 589 aa23.96■■□□□ 1.43
COMMD1-208ENST00000472729 A0A1B0GUL6 1792 aa23.96■■□□□ 1.43
COMMD1-208ENST00000472729 PAPPA2Q9BXP8 1791 aa23.96■■□□□ 1.43
COMMD1-208ENST00000472729 UNCXA6NJT0 531 aa23.95■■□□□ 1.42
COMMD1-208ENST00000472729 TRPA1O75762 1119 aa23.95■■□□□ 1.42
COMMD1-208ENST00000472729 SREBF2Q12772 1141 aa23.95■■□□□ 1.42
COMMD1-208ENST00000472729 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.95■■□□□ 1.42
COMMD1-208ENST00000472729 SAGE1Q9NXZ1 904 aa23.95■■□□□ 1.42
COMMD1-208ENST00000472729 AOX1Q06278 1338 aa23.94■■□□□ 1.42
COMMD1-208ENST00000472729 SALL1Q9NSC2 1324 aa23.94■■□□□ 1.42
COMMD1-208ENST00000472729 SSH3Q8TE77 659 aa23.94■■□□□ 1.42
COMMD1-208ENST00000472729 TMEM39BQ9GZU3 492 aa23.94■■□□□ 1.42
COMMD1-208ENST00000472729 CAPN15O75808 1086 aa23.93■■□□□ 1.42
COMMD1-208ENST00000472729 PRDX5P30044 214 aa23.93■■□□□ 1.42
COMMD1-208ENST00000472729 CACNB3P54284 484 aa23.93■■□□□ 1.42
COMMD1-208ENST00000472729 RASGRF1Q13972 1273 aa23.93■■□□□ 1.42
COMMD1-208ENST00000472729 POLA2Q14181 598 aa23.93■■□□□ 1.42
COMMD1-208ENST00000472729 LDLRAD1Q5T700 205 aa23.93■■□□□ 1.42
COMMD1-208ENST00000472729 APOBEC3HQ6NTF7 200 aaKnown RBP23.93■■□□□ 1.42
COMMD1-208ENST00000472729 RNF186Q9NXI6 227 aa23.93■■□□□ 1.42
COMMD1-208ENST00000472729 FZD1Q9UP38 647 aa23.93■■□□□ 1.42
COMMD1-208ENST00000472729 POLR2AP24928 1970 aaKnown RBP23.92■■□□□ 1.42
COMMD1-208ENST00000472729 UQCRFS1P1P0C7P4 283 aa23.92■■□□□ 1.42
COMMD1-208ENST00000472729 MAP3K11Q16584 847 aa23.92■■□□□ 1.42
COMMD1-208ENST00000472729 CCDC158Q5M9N0 1113 aa23.92■■□□□ 1.42
COMMD1-208ENST00000472729 ANKRD13AQ8IZ07 590 aa23.92■■□□□ 1.42
COMMD1-208ENST00000472729 DDX19BQ9UMR2 479 aa23.92■■□□□ 1.42
COMMD1-208ENST00000472729 DIXDC1Q155Q3 683 aa23.91■■□□□ 1.42
COMMD1-208ENST00000472729 FKBP1CQ5VVH2 108 aa23.91■■□□□ 1.42
COMMD1-208ENST00000472729 FAM83AQ86UY5 434 aa23.91■■□□□ 1.42
COMMD1-208ENST00000472729 PDS5AQ29RF7 1337 aaKnown RBP23.9■■□□□ 1.42
COMMD1-208ENST00000472729 TTC39AQ5SRH9 613 aa23.9■■□□□ 1.42
COMMD1-208ENST00000472729 ERICH6Q7L0X2 663 aa23.9■■□□□ 1.42
COMMD1-208ENST00000472729 SPATA5Q8NB90 893 aa23.9■■□□□ 1.42
COMMD1-208ENST00000472729 USP40Q9NVE5 1235 aa23.9■■□□□ 1.42
COMMD1-208ENST00000472729 DAGLAQ9Y4D2 1042 aa23.9■■□□□ 1.42
COMMD1-208ENST00000472729 THSD7BQ9C0I4 1608 aa23.89■■□□□ 1.42
COMMD1-208ENST00000472729 ZBTB22O15209 634 aa23.89■■□□□ 1.41
COMMD1-208ENST00000472729 USP2O75604 605 aaPredicted RBP23.89■■□□□ 1.41
COMMD1-208ENST00000472729 INHBEP58166 350 aa23.89■■□□□ 1.41
COMMD1-208ENST00000472729 HSP90AB4PQ58FF6 505 aa23.89■■□□□ 1.41
COMMD1-208ENST00000472729 SPRYD7Q5W111 196 aa23.89■■□□□ 1.41
COMMD1-208ENST00000472729 ERC1Q8IUD2 1116 aa23.89■■□□□ 1.41
COMMD1-208ENST00000472729 GPR108Q9NPR9 543 aa23.89■■□□□ 1.41
COMMD1-208ENST00000472729 CSADQ9Y600 493 aa23.89■■□□□ 1.41
COMMD1-208ENST00000472729 ZNF646O15015 1829 aaPredicted RBP23.89■■□□□ 1.41
COMMD1-208ENST00000472729 MANSC4A6NHS7 340 aaPredicted RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms