RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ZIC2O95409 532 aaPredicted RBP3.59□□□□□ -1.83
XRN1-210ENST00000472697 SDSP20132 328 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 GSTT1P30711 240 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 POLR2BP30876 1174 aaKnown RBP3.59□□□□□ -1.83
XRN1-210ENST00000472697 ID4P47928 161 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 ZNF460Q14592 562 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 C2orf27AQ580R0 203 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 NBPF6Q5VWK0 638 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 DTHD1Q6ZMT9 781 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 BICDL1Q6ZP65 573 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 HFE2Q6ZVN8 426 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 RNF180Q86T96 592 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 TICAM2Q86XR7 235 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 TTC16Q8NEE8 873 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 TRPM4Q8TD43 1214 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 EXOC2Q96KP1 924 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 NBPF4Q96M43 638 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 TARS2Q9BW92 718 aaKnown RBP3.59□□□□□ -1.83
XRN1-210ENST00000472697 ZC3H12CQ9C0D7 883 aaKnown RBP3.59□□□□□ -1.83
XRN1-210ENST00000472697 STRN4Q9NRL3 753 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 SMARCA2P51531 1590 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 LTBP3Q9NS15 1303 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 GIPRP48546 466 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 MLLT1Q03111 559 aaPredicted RBP3.59□□□□□ -1.83
XRN1-210ENST00000472697 NFE2Q16621 373 aaPredicted RBP3.59□□□□□ -1.83
XRN1-210ENST00000472697 HSP90AB2PQ58FF8 381 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 ESCO1Q5FWF5 840 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 SOGA3Q5TF21 947 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 RELL1Q8IUW5 271 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 FERD3LQ96RJ6 166 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 RUBCNLQ9H714 662 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 OSGEPQ9NPF4 335 aa3.59□□□□□ -1.83
XRN1-210ENST00000472697 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.59□□□□□ -1.834e-7■■■■■ 57.7
XRN1-210ENST00000472697 WASHC2CQ9Y4E1 1318 aa3.59□□□□□ -1.84
XRN1-210ENST00000472697 J3QW42 95 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 LCE2BO14633 110 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 TSPAN6O43657 245 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 STRN3Q13033 797 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 HGSNATQ68CP4 663 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 ZNF787Q6DD87 383 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 PDE12Q6L8Q7 609 aaKnown RBP3.58□□□□□ -1.84
XRN1-210ENST00000472697 SLITRK4Q8IW52 837 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 MORC4Q8TE76 937 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 RHBDD1Q8TEB9 315 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 NKD1Q969G9 470 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 MKL1Q969V6 931 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 ARPC5LQ9BPX5 153 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 IL21Q9HBE4 155 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 PRDM10Q9NQV6 1147 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 SEC31BQ9NQW1 1179 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 ACTR10Q9NZ32 417 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 CDV3Q9UKY7 258 aaKnown RBP3.58□□□□□ -1.84
XRN1-210ENST00000472697 WDR62O43379 1518 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 SETD1BQ9UPS6 1966 aaKnown RBP3.58□□□□□ -1.84
XRN1-210ENST00000472697 NRG2O14511 850 aaPredicted RBP3.58□□□□□ -1.84
XRN1-210ENST00000472697 AKAP10O43572 662 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 STAT3P40763 770 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 PTGIRP43119 386 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 ATP11AP98196 1134 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 NFKB2Q00653 900 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 SFSWAPQ12872 951 aaKnown RBP3.58□□□□□ -1.84
XRN1-210ENST00000472697 FAM209AQ5JX71 171 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 TSHZ1Q6ZSZ6 1077 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 Q6ZVU0 165 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 REC114Q7Z4M0 266 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 TTC6Q86TZ1 520 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 HOMER1Q86YM7 354 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 TRIM42Q8IWZ5 723 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 ASAP3Q8TDY4 903 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 CEP63Q96MT8 703 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 VTA1Q9NP79 307 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 CHMP3Q9Y3E7 222 aa3.58□□□□□ -1.84
XRN1-210ENST00000472697 NFKBIEO00221 500 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 PRC1O43663 620 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 MYBP10242 640 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 PCSK2P16519 638 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 EIF6P56537 245 aaKnown RBP3.57□□□□□ -1.84
XRN1-210ENST00000472697 SLC27A3Q5K4L6 730 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 XKR5Q6UX68 686 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 AGMOQ6ZNB7 445 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 GAL3ST3Q96A11 431 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 IL17RAQ96F46 866 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 NECAB3Q96P71 396 aaPredicted RBP3.57□□□□□ -1.84
XRN1-210ENST00000472697 ZIC5Q96T25 663 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 OSMRQ99650 979 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 MUC3BQ9H195 1237 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 PTPRHQ9HD43 1115 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 R3HCC1Q9Y3T6 440 aaKnown RBP3.57□□□□□ -1.84
XRN1-210ENST00000472697 SCRIBQ14160 1630 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 KIF21AQ7Z4S6 1674 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 TMEM238LA0A1B0GVL6 79 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 A0A1W2PQH9 124 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 DCDC2BA2VCK2 349 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 GFRA3O60609 400 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 LDHAP00338 332 aaKnown RBP3.57□□□□□ -1.84
XRN1-210ENST00000472697 TIMP2P16035 220 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 CDC25BP30305 580 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 ARSDP51689 593 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 WDR4P57081 412 aaKnown RBP3.57□□□□□ -1.84
XRN1-210ENST00000472697 FOXC1Q12948 553 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms