RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 VGLL4Q14135 290 aa12.78□□□□□ -0.36
SCAMP3-205ENST00000472397 CCL15Q16663 113 aa12.78□□□□□ -0.36
SCAMP3-205ENST00000472397 NOM1Q5C9Z4 860 aaKnown RBP12.78□□□□□ -0.36
SCAMP3-205ENST00000472397 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.78□□□□□ -0.36
SCAMP3-205ENST00000472397 FAM43AQ8N2R8 423 aa12.78□□□□□ -0.36
SCAMP3-205ENST00000472397 TEPSINQ96N21 525 aa12.78□□□□□ -0.36
SCAMP3-205ENST00000472397 CFHR5Q9BXR6 569 aa12.78□□□□□ -0.36
SCAMP3-205ENST00000472397 ARHGAP39Q9C0H5 1083 aa12.78□□□□□ -0.36
SCAMP3-205ENST00000472397 PPP2R3BQ9Y5P8 575 aa12.78□□□□□ -0.36
SCAMP3-205ENST00000472397 PTCH2Q9Y6C5 1203 aa12.78□□□□□ -0.36
SCAMP3-205ENST00000472397 INHBEP58166 350 aa12.77□□□□□ -0.37
SCAMP3-205ENST00000472397 TAF1CQ15572 869 aaPredicted RBP12.77□□□□□ -0.37
SCAMP3-205ENST00000472397 OTUD7BQ6GQQ9 843 aa12.77□□□□□ -0.37
SCAMP3-205ENST00000472397 VPS37DQ86XT2 251 aa12.77□□□□□ -0.37
SCAMP3-205ENST00000472397 SH3TC2Q8TF17 1288 aa12.77□□□□□ -0.37
SCAMP3-205ENST00000472397 ZKSCAN4Q969J2 545 aaPredicted RBP12.77□□□□□ -0.37
SCAMP3-205ENST00000472397 MS4A4AQ96JQ5 239 aa12.77□□□□□ -0.37
SCAMP3-205ENST00000472397 SRCIN1Q9C0H9 1055 aa12.77□□□□□ -0.37
SCAMP3-205ENST00000472397 FAM205AQ6ZU69 1335 aa12.77□□□□□ -0.37
SCAMP3-205ENST00000472397 COL1A1P02452 1464 aaPredicted RBP12.77□□□□□ -0.37
SCAMP3-205ENST00000472397 MMP14P50281 582 aa12.76□□□□□ -0.37
SCAMP3-205ENST00000472397 BCAMP50895 628 aa12.76□□□□□ -0.37
SCAMP3-205ENST00000472397 FKBP1AP62942 108 aaKnown RBP12.76□□□□□ -0.37
SCAMP3-205ENST00000472397 MAP3K9P80192 1104 aa12.76□□□□□ -0.37
SCAMP3-205ENST00000472397 METTL24Q5JXM2 366 aa12.76□□□□□ -0.37
SCAMP3-205ENST00000472397 MIGA2Q7L4E1 593 aa12.76□□□□□ -0.37
SCAMP3-205ENST00000472397 BICC1Q9H694 974 aaKnown RBP12.76□□□□□ -0.37
SCAMP3-205ENST00000472397 OTOFQ9HC10 1997 aa12.76□□□□□ -0.37
SCAMP3-205ENST00000472397 ZSWIM8A7E2V4 1837 aa12.75□□□□□ -0.37
SCAMP3-205ENST00000472397 UBE4AQ14139 1066 aa12.75□□□□□ -0.37
SCAMP3-205ENST00000472397 SLC4A8Q2Y0W8 1093 aa12.75□□□□□ -0.37
SCAMP3-205ENST00000472397 HABP4Q5JVS0 413 aaKnown RBP12.75□□□□□ -0.37
SCAMP3-205ENST00000472397 WDR63Q8IWG1 891 aa12.75□□□□□ -0.37
SCAMP3-205ENST00000472397 PCDH10Q9P2E7 1040 aa12.75□□□□□ -0.37
SCAMP3-205ENST00000472397 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
SCAMP3-205ENST00000472397 CSADQ9Y600 493 aa12.75□□□□□ -0.37
SCAMP3-205ENST00000472397 ECM29Q5VYK3 1845 aa12.74□□□□□ -0.37
SCAMP3-205ENST00000472397 TESPA1A2RU30 521 aaPredicted RBP12.74□□□□□ -0.37
SCAMP3-205ENST00000472397 ANKRD44Q8N8A2 993 aa12.74□□□□□ -0.37
SCAMP3-205ENST00000472397 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.74□□□□□ -0.371e-10■■■□□ 19.1
SCAMP3-205ENST00000472397 WRNIP1Q96S55 665 aa12.74□□□□□ -0.37
SCAMP3-205ENST00000472397 ZFYVE28Q9HCC9 887 aa12.74□□□□□ -0.37
SCAMP3-205ENST00000472397 SERPINA10Q9UK55 444 aa12.74□□□□□ -0.37
SCAMP3-205ENST00000472397 BTBD19C9JJ37 291 aa12.73□□□□□ -0.37
SCAMP3-205ENST00000472397 ANP32CO43423 234 aa12.73□□□□□ -0.37
SCAMP3-205ENST00000472397 ALDH1L1O75891 902 aa12.73□□□□□ -0.37
SCAMP3-205ENST00000472397 TNNI2P48788 182 aa12.73□□□□□ -0.37
SCAMP3-205ENST00000472397 TCP10Q12799 353 aa12.73□□□□□ -0.37
SCAMP3-205ENST00000472397 TNFAIP1Q13829 316 aa12.73□□□□□ -0.37
SCAMP3-205ENST00000472397 SLC9C1Q4G0N8 1177 aa12.73□□□□□ -0.37
SCAMP3-205ENST00000472397 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
SCAMP3-205ENST00000472397 FBXO33Q7Z6M2 555 aa12.73□□□□□ -0.37
SCAMP3-205ENST00000472397 TMEM106CQ9BVX2 250 aa12.73□□□□□ -0.37
SCAMP3-205ENST00000472397 CPA4Q9UI42 421 aa12.73□□□□□ -0.37
SCAMP3-205ENST00000472397 SNCAIPQ9Y6H5 919 aa12.73□□□□□ -0.37
SCAMP3-205ENST00000472397 SLURP2P0DP57 97 aa12.72□□□□□ -0.37
SCAMP3-205ENST00000472397 INPP5BP32019 993 aa12.72□□□□□ -0.37
SCAMP3-205ENST00000472397 GTF2A2P52657 109 aa12.72□□□□□ -0.37
SCAMP3-205ENST00000472397 TEKT1Q969V4 418 aa12.72□□□□□ -0.37
SCAMP3-205ENST00000472397 ARMC5Q96C12 935 aa12.72□□□□□ -0.37
SCAMP3-205ENST00000472397 MROH5Q6ZUA9 1318 aa12.71□□□□□ -0.37
SCAMP3-205ENST00000472397 IRF6O14896 467 aa12.71□□□□□ -0.37
SCAMP3-205ENST00000472397 CTGFP29279 349 aa12.71□□□□□ -0.37
SCAMP3-205ENST00000472397 CAVIN4Q5BKX8 364 aa12.71□□□□□ -0.37
SCAMP3-205ENST00000472397 MRPL50Q8N5N7 158 aaKnown RBP12.71□□□□□ -0.37
SCAMP3-205ENST00000472397 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.71□□□□□ -0.37
SCAMP3-205ENST00000472397 ZNF333Q96JL9 665 aa12.71□□□□□ -0.37
SCAMP3-205ENST00000472397 SIL1Q9H173 461 aa12.71□□□□□ -0.37
SCAMP3-205ENST00000472397 KIAA0100Q14667 2235 aaKnown RBP12.71□□□□□ -0.37
SCAMP3-205ENST00000472397 SPDYE5A6NIY4 337 aa12.7□□□□□ -0.38
SCAMP3-205ENST00000472397 MTFR1Q15390 333 aa12.7□□□□□ -0.38
SCAMP3-205ENST00000472397 DIXDC1Q155Q3 683 aa12.7□□□□□ -0.38
SCAMP3-205ENST00000472397 APOBEC3HQ6NTF7 200 aaKnown RBP12.7□□□□□ -0.38
SCAMP3-205ENST00000472397 ZFPM1Q8IX07 1006 aa12.7□□□□□ -0.38
SCAMP3-205ENST00000472397 TMOD2Q9NZR1 351 aa12.7□□□□□ -0.38
SCAMP3-205ENST00000472397 COLQQ9Y215 455 aaPredicted RBP12.7□□□□□ -0.38
SCAMP3-205ENST00000472397 HTTP42858 3142 aa12.69□□□□□ -0.38
SCAMP3-205ENST00000472397 PDE8BO95263 885 aa12.69□□□□□ -0.38
SCAMP3-205ENST00000472397 NFIAQ12857 509 aa12.69□□□□□ -0.38
SCAMP3-205ENST00000472397 VGLL2Q8N8G2 317 aa12.69□□□□□ -0.38
SCAMP3-205ENST00000472397 UNCXA6NJT0 531 aa12.68□□□□□ -0.38
SCAMP3-205ENST00000472397 H0YGN5 161 aa12.68□□□□□ -0.38
SCAMP3-205ENST00000472397 CETPP11597 493 aa12.68□□□□□ -0.38
SCAMP3-205ENST00000472397 ZEB1P37275 1124 aaPredicted RBP12.68□□□□□ -0.38
SCAMP3-205ENST00000472397 LACTBP83111 547 aaPredicted RBP12.68□□□□□ -0.38
SCAMP3-205ENST00000472397 ERO1BQ86YB8 467 aa12.68□□□□□ -0.38
SCAMP3-205ENST00000472397 TLR2O60603 784 aa12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 FMNL1O95466 1100 aaPredicted RBP12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 PSMC4P43686 418 aa12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 SNAPC2Q13487 334 aa12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 KIF22Q14807 665 aa12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 RABL6Q3YEC7 729 aaPredicted RBP12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 CDC42EP5Q6NZY7 148 aa12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 NBPF11Q86T75 865 aa12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 CCDC84Q86UT8 332 aaPredicted RBP12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 TBC1D22AQ8WUA7 517 aa12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 SSH1Q8WYL5 1049 aa12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 GCC1Q96CN9 775 aa12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 ZDHHC15Q96MV8 337 aa12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 ZNF341Q9BYN7 854 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms