RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 WDR33Q9C0J8 1336 aaKnown RBP11.54□□□□□ -0.56
SMC4-213ENST00000472282 H7C1D1 291 aa11.53□□□□□ -0.56
SMC4-213ENST00000472282 FAM161AQ3B820 660 aa11.53□□□□□ -0.56
SMC4-213ENST00000472282 RBM26Q5T8P6 1007 aaKnown RBP11.53□□□□□ -0.56
SMC4-213ENST00000472282 SLC4A10Q6U841 1118 aa11.53□□□□□ -0.56
SMC4-213ENST00000472282 LINS1Q8NG48 757 aa11.53□□□□□ -0.56
SMC4-213ENST00000472282 DPF2Q92785 391 aa11.53□□□□□ -0.56
SMC4-213ENST00000472282 CDC5LQ99459 802 aaKnown RBP11.53□□□□□ -0.56
SMC4-213ENST00000472282 PLA2G12BQ9BX93 195 aa11.53□□□□□ -0.56
SMC4-213ENST00000472282 MINPP1Q9UNW1 487 aa11.53□□□□□ -0.56
SMC4-213ENST00000472282 ECM29Q5VYK3 1845 aa11.52□□□□□ -0.57
SMC4-213ENST00000472282 CELF2O95319 508 aaKnown RBP11.52□□□□□ -0.57
SMC4-213ENST00000472282 CSF1RP07333 972 aa11.52□□□□□ -0.57
SMC4-213ENST00000472282 VIL1P09327 827 aaKnown RBP11.52□□□□□ -0.57
SMC4-213ENST00000472282 ATP2B4P23634 1241 aa11.52□□□□□ -0.57
SMC4-213ENST00000472282 KLRK1P26718 216 aa11.52□□□□□ -0.57
SMC4-213ENST00000472282 BEND3Q5T5X7 828 aa11.52□□□□□ -0.57
SMC4-213ENST00000472282 CYP4F22Q6NT55 531 aa11.52□□□□□ -0.57
SMC4-213ENST00000472282 USP48Q86UV5 1035 aa11.52□□□□□ -0.57
SMC4-213ENST00000472282 TXNRD3Q86VQ6 643 aa11.52□□□□□ -0.57
SMC4-213ENST00000472282 FRAT1Q92837 279 aaPredicted RBP11.52□□□□□ -0.57
SMC4-213ENST00000472282 LRCH3Q96II8 777 aa11.52□□□□□ -0.57
SMC4-213ENST00000472282 API5Q9BZZ5 524 aaKnown RBP11.52□□□□□ -0.57
SMC4-213ENST00000472282 ZNF408Q9H9D4 720 aa11.52□□□□□ -0.57
SMC4-213ENST00000472282 BSDC1Q9NW68 430 aaPredicted RBP11.52□□□□□ -0.57
SMC4-213ENST00000472282 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.52□□□□□ -0.57
SMC4-213ENST00000472282 RCAN3Q9UKA8 241 aa11.52□□□□□ -0.57
SMC4-213ENST00000472282 TLL2Q9Y6L7 1015 aa11.52□□□□□ -0.57
SMC4-213ENST00000472282 PCNTO95613 3336 aa11.52□□□□□ -0.57
SMC4-213ENST00000472282 ZNF609O15014 1411 aa11.52□□□□□ -0.57
SMC4-213ENST00000472282 ADM5C9JUS6 153 aa11.51□□□□□ -0.57
SMC4-213ENST00000472282 ITGA6P23229 1130 aa11.51□□□□□ -0.57
SMC4-213ENST00000472282 CCT4P50991 539 aaKnown RBP11.51□□□□□ -0.57
SMC4-213ENST00000472282 FOXO4P98177 505 aa11.51□□□□□ -0.57
SMC4-213ENST00000472282 GRM1Q13255 1194 aa11.51□□□□□ -0.57
SMC4-213ENST00000472282 EPHA10Q5JZY3 1008 aa11.51□□□□□ -0.57
SMC4-213ENST00000472282 ZC3H15Q8WU90 426 aaKnown RBP11.51□□□□□ -0.57
SMC4-213ENST00000472282 CAPNS2Q96L46 248 aa11.51□□□□□ -0.57
SMC4-213ENST00000472282 MXD3Q9BW11 206 aa11.51□□□□□ -0.57
SMC4-213ENST00000472282 WBP1LQ9NX94 342 aa11.51□□□□□ -0.57
SMC4-213ENST00000472282 TNNQ9UQP3 1299 aa11.51□□□□□ -0.57
SMC4-213ENST00000472282 MED23Q9ULK4 1368 aa11.51□□□□□ -0.57
SMC4-213ENST00000472282 SNAP23O00161 211 aa11.5□□□□□ -0.57
SMC4-213ENST00000472282 IPO8O15397 1037 aaKnown RBP11.5□□□□□ -0.57
SMC4-213ENST00000472282 ALDH1L1O75891 902 aa11.5□□□□□ -0.57
SMC4-213ENST00000472282 TRIM27P14373 513 aa11.5□□□□□ -0.57
SMC4-213ENST00000472282 RPS12P25398 132 aaKnown RBP11.5□□□□□ -0.57
SMC4-213ENST00000472282 KIF4BQ2VIQ3 1234 aa11.5□□□□□ -0.57
SMC4-213ENST00000472282 ZKSCAN2Q63HK3 967 aa11.5□□□□□ -0.57
SMC4-213ENST00000472282 RSBN1LQ6PCB5 846 aaPredicted RBP11.5□□□□□ -0.57
SMC4-213ENST00000472282 PAXIP1Q6ZW49 1069 aaPredicted RBP11.5□□□□□ -0.57
SMC4-213ENST00000472282 CDC37L1Q7L3B6 337 aa11.5□□□□□ -0.57
SMC4-213ENST00000472282 SAPCD2Q86UD0 394 aa11.5□□□□□ -0.57
SMC4-213ENST00000472282 TNS4Q8IZW8 715 aa11.5□□□□□ -0.57
SMC4-213ENST00000472282 GMLQ99445 158 aa11.5□□□□□ -0.57
SMC4-213ENST00000472282 SRCIN1Q9C0H9 1055 aa11.5□□□□□ -0.57
SMC4-213ENST00000472282 AOC2O75106 756 aa11.49□□□□□ -0.57
SMC4-213ENST00000472282 ATF7IPQ6VMQ6 1270 aa11.49□□□□□ -0.57
SMC4-213ENST00000472282 ARHGAP45Q92619 1136 aa11.49□□□□□ -0.57
SMC4-213ENST00000472282 CLUAP1Q96AJ1 413 aa11.49□□□□□ -0.57
SMC4-213ENST00000472282 TSR3Q9UJK0 312 aaKnown RBP11.49□□□□□ -0.57
SMC4-213ENST00000472282 SCAF8Q9UPN6 1271 aaKnown RBP11.49□□□□□ -0.57
SMC4-213ENST00000472282 CASP8AP2Q9UKL3 1982 aa11.48□□□□□ -0.57
SMC4-213ENST00000472282 HSPA8P11142 646 aaKnown RBP11.48□□□□□ -0.57
SMC4-213ENST00000472282 IGHMBP2P38935 993 aaKnown RBP11.48□□□□□ -0.57
SMC4-213ENST00000472282 LBX1P52954 281 aa11.48□□□□□ -0.57
SMC4-213ENST00000472282 ZNF280AP59817 542 aaPredicted RBP11.48□□□□□ -0.57
SMC4-213ENST00000472282 CHRNDQ07001 517 aa11.48□□□□□ -0.57
SMC4-213ENST00000472282 AGBL3Q8NEM8 1001 aa11.48□□□□□ -0.57
SMC4-213ENST00000472282 ZNF594Q96JF6 807 aaPredicted RBP11.48□□□□□ -0.57
SMC4-213ENST00000472282 ZIC5Q96T25 663 aa11.48□□□□□ -0.57
SMC4-213ENST00000472282 GGA3Q9NZ52 723 aa11.48□□□□□ -0.57
SMC4-213ENST00000472282 ARIH1Q9Y4X5 557 aaPredicted RBP11.48□□□□□ -0.57
SMC4-213ENST00000472282 IRS2Q9Y4H2 1338 aa11.48□□□□□ -0.57
SMC4-213ENST00000472282 ARAP2Q8WZ64 1704 aa11.48□□□□□ -0.57
SMC4-213ENST00000472282 AKAP11Q9UKA4 1901 aa11.48□□□□□ -0.57
SMC4-213ENST00000472282 ZNF804BA4D1E1 1349 aa11.47□□□□□ -0.57
SMC4-213ENST00000472282 USP17L3A6NCW0 530 aa11.47□□□□□ -0.57
SMC4-213ENST00000472282 USP17L4A6NCW7 530 aa11.47□□□□□ -0.57
SMC4-213ENST00000472282 GRM8O00222 908 aa11.47□□□□□ -0.57
SMC4-213ENST00000472282 TAF5LO75529 589 aa11.47□□□□□ -0.57
SMC4-213ENST00000472282 KCNC4Q03721 635 aa11.47□□□□□ -0.57
SMC4-213ENST00000472282 TSR1Q2NL82 804 aaKnown RBP11.47□□□□□ -0.57
SMC4-213ENST00000472282 DACT2Q5SW24 774 aa11.47□□□□□ -0.57
SMC4-213ENST00000472282 Q6ZNB5 142 aa11.47□□□□□ -0.57
SMC4-213ENST00000472282 USP17L1Q7RTZ2 530 aa11.47□□□□□ -0.57
SMC4-213ENST00000472282 KRT26Q7Z3Y9 468 aa11.47□□□□□ -0.57
SMC4-213ENST00000472282 PODNQ7Z5L7 613 aa11.47□□□□□ -0.57
SMC4-213ENST00000472282 HELBQ8NG08 1087 aaPredicted RBP11.47□□□□□ -0.57
SMC4-213ENST00000472282 KAZALD1Q96I82 304 aa11.47□□□□□ -0.57
SMC4-213ENST00000472282 C9orf78Q9NZ63 289 aaPredicted RBP11.47□□□□□ -0.57
SMC4-213ENST00000472282 ANKRD18BA2A2Z9 1011 aa11.46□□□□□ -0.57
SMC4-213ENST00000472282 PLIN1O60240 522 aa11.46□□□□□ -0.57
SMC4-213ENST00000472282 ECE1P42892 770 aa11.46□□□□□ -0.57
SMC4-213ENST00000472282 CTCFP49711 727 aaPredicted RBP11.46□□□□□ -0.57
SMC4-213ENST00000472282 SCARF1Q14162 830 aa11.46□□□□□ -0.57
SMC4-213ENST00000472282 ANGEL2Q5VTE6 544 aaKnown RBP11.46□□□□□ -0.57
SMC4-213ENST00000472282 LMBR1LQ6UX01 489 aa11.46□□□□□ -0.57
SMC4-213ENST00000472282 FTSJ3Q8IY81 847 aaKnown RBP11.46□□□□□ -0.57
SMC4-213ENST00000472282 AIDAQ96BJ3 306 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms