RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 TMEM39BQ9GZU3 492 aa24.28■■□□□ 1.48
SORT1-203ENST00000471996 ZCCHC17Q9NP64 241 aaKnown RBP24.28■■□□□ 1.48
SORT1-203ENST00000471996 SPDYE5A6NIY4 337 aa24.27■■□□□ 1.48
SORT1-203ENST00000471996 IFIT5Q13325 482 aaKnown RBP24.27■■□□□ 1.48
SORT1-203ENST00000471996 TTF2Q9UNY4 1162 aaKnown RBP24.27■■□□□ 1.48
SORT1-203ENST00000471996 RANBP2P49792 3224 aaKnown RBP24.26■■□□□ 1.47
SORT1-203ENST00000471996 TCP10L2B9ZVM9 353 aa24.26■■□□□ 1.47
SORT1-203ENST00000471996 DLL1O00548 723 aa24.26■■□□□ 1.47
SORT1-203ENST00000471996 SLC4A2P04920 1241 aa24.26■■□□□ 1.47
SORT1-203ENST00000471996 CETPP11597 493 aa24.26■■□□□ 1.47
SORT1-203ENST00000471996 TNNI2P48788 182 aa24.26■■□□□ 1.47
SORT1-203ENST00000471996 MTFR1Q15390 333 aa24.26■■□□□ 1.47
SORT1-203ENST00000471996 MFSD14BQ5SR56 506 aa24.26■■□□□ 1.47
SORT1-203ENST00000471996 DZIP1LQ8IYY4 767 aaKnown RBP24.26■■□□□ 1.47
SORT1-203ENST00000471996 BTBD19C9JJ37 291 aa24.25■■□□□ 1.47
SORT1-203ENST00000471996 LINS1Q8NG48 757 aa24.25■■□□□ 1.47
SORT1-203ENST00000471996 FOXO4P98177 505 aa24.24■■□□□ 1.47
SORT1-203ENST00000471996 SLC17A8Q8NDX2 589 aa24.24■■□□□ 1.47
SORT1-203ENST00000471996 TDRD7Q8NHU6 1098 aaKnown RBP24.24■■□□□ 1.47
SORT1-203ENST00000471996 NKX2-3Q8TAU0 364 aa24.24■■□□□ 1.47
SORT1-203ENST00000471996 PRO3102Q9H379 93 aa24.24■■□□□ 1.47
SORT1-203ENST00000471996 ERO1BQ86YB8 467 aa24.23■■□□□ 1.47
SORT1-203ENST00000471996 DNAAF4Q8WXU2 420 aa24.23■■□□□ 1.47
SORT1-203ENST00000471996 TSR2Q969E8 191 aaKnown RBP24.23■■□□□ 1.47
SORT1-203ENST00000471996 CHMP3Q9Y3E7 222 aa24.23■■□□□ 1.47
SORT1-203ENST00000471996 SNCAIPQ9Y6H5 919 aa24.23■■□□□ 1.47
SORT1-203ENST00000471996 PLIN1O60240 522 aa24.22■■□□□ 1.47
SORT1-203ENST00000471996 CRKP46108 304 aa24.22■■□□□ 1.47
SORT1-203ENST00000471996 FLIIQ13045 1269 aa24.22■■□□□ 1.47
SORT1-203ENST00000471996 SNAPC2Q13487 334 aa24.22■■□□□ 1.47
SORT1-203ENST00000471996 C17orf99Q6UX52 265 aa24.22■■□□□ 1.47
SORT1-203ENST00000471996 UBE2Q1Q7Z7E8 422 aa24.22■■□□□ 1.47
SORT1-203ENST00000471996 SRRDQ9UH36 339 aa24.22■■□□□ 1.47
SORT1-203ENST00000471996 IRF6O14896 467 aa24.21■■□□□ 1.47
SORT1-203ENST00000471996 TWISTNBQ3B726 338 aaPredicted RBP24.21■■□□□ 1.47
SORT1-203ENST00000471996 HTATIP2Q9BUP3 242 aa24.21■■□□□ 1.47
SORT1-203ENST00000471996 CTGFP29279 349 aa24.2■■□□□ 1.46
SORT1-203ENST00000471996 GJA8P48165 433 aa24.2■■□□□ 1.46
SORT1-203ENST00000471996 LDHAL6AQ6ZMR3 332 aa24.2■■□□□ 1.46
SORT1-203ENST00000471996 ZSWIM8A7E2V4 1837 aa24.19■■□□□ 1.46
SORT1-203ENST00000471996 GJB1P08034 283 aa24.19■■□□□ 1.46
SORT1-203ENST00000471996 PSMC4P43686 418 aa24.19■■□□□ 1.46
SORT1-203ENST00000471996 PPIL2Q13356 520 aa24.19■■□□□ 1.46
SORT1-203ENST00000471996 FKBP5Q13451 457 aaPredicted RBP24.19■■□□□ 1.46
SORT1-203ENST00000471996 ZNF594Q96JF6 807 aaPredicted RBP24.19■■□□□ 1.46
SORT1-203ENST00000471996 TRIM47Q96LD4 638 aa24.19■■□□□ 1.46
SORT1-203ENST00000471996 WRNIP1Q96S55 665 aa24.19■■□□□ 1.46
SORT1-203ENST00000471996 NR2E3Q9Y5X4 410 aa24.19■■□□□ 1.46
SORT1-203ENST00000471996 ECM2O94769 699 aaPredicted RBP24.18■■□□□ 1.46
SORT1-203ENST00000471996 HOXD10P28358 340 aa24.18■■□□□ 1.46
SORT1-203ENST00000471996 HIBADHP31937 336 aaKnown RBP24.18■■□□□ 1.46
SORT1-203ENST00000471996 GRK4P32298 578 aa24.18■■□□□ 1.46
SORT1-203ENST00000471996 GYG1P46976 350 aa24.18■■□□□ 1.46
SORT1-203ENST00000471996 CCDC57Q2TAC2 916 aa24.18■■□□□ 1.46
SORT1-203ENST00000471996 LMBR1LQ6UX01 489 aa24.18■■□□□ 1.46
SORT1-203ENST00000471996 RAET1EQ8TD07 263 aa24.18■■□□□ 1.46
SORT1-203ENST00000471996 ZKSCAN4Q969J2 545 aaPredicted RBP24.18■■□□□ 1.46
SORT1-203ENST00000471996 FAM84BQ96KN1 310 aaPredicted RBP24.18■■□□□ 1.46
SORT1-203ENST00000471996 CNNM1Q9NRU3 951 aa24.18■■□□□ 1.46
SORT1-203ENST00000471996 CPA4Q9UI42 421 aa24.18■■□□□ 1.46
SORT1-203ENST00000471996 A0A1B0GUL6 1792 aa24.17■■□□□ 1.46
SORT1-203ENST00000471996 OSBPP22059 807 aa24.17■■□□□ 1.46
SORT1-203ENST00000471996 DDX10Q13206 875 aaKnown RBP24.17■■□□□ 1.46
SORT1-203ENST00000471996 UBE4AQ14139 1066 aa24.17■■□□□ 1.46
SORT1-203ENST00000471996 TAF7LQ5H9L4 462 aa24.17■■□□□ 1.46
SORT1-203ENST00000471996 RIPOR2Q9Y4F9 1068 aa24.17■■□□□ 1.46
SORT1-203ENST00000471996 CCL5P13501 91 aa24.16■■□□□ 1.46
SORT1-203ENST00000471996 ARAP2Q8WZ64 1704 aa24.15■■□□□ 1.46
SORT1-203ENST00000471996 ZBTB7BO15156 539 aaPredicted RBP24.15■■□□□ 1.46
SORT1-203ENST00000471996 FMNL1O95466 1100 aaPredicted RBP24.15■■□□□ 1.46
SORT1-203ENST00000471996 CACNB3P54284 484 aa24.15■■□□□ 1.46
SORT1-203ENST00000471996 HDLBPQ00341 1268 aaKnown RBP24.15■■□□□ 1.46
SORT1-203ENST00000471996 GRIK5Q16478 980 aa24.15■■□□□ 1.46
SORT1-203ENST00000471996 HOOK2Q96ED9 719 aa24.15■■□□□ 1.46
SORT1-203ENST00000471996 RNF208Q9H0X6 261 aa24.15■■□□□ 1.46
SORT1-203ENST00000471996 A0A1W2PPC1 479 aa24.14■■□□□ 1.45
SORT1-203ENST00000471996 PPATQ06203 517 aa24.14■■□□□ 1.45
SORT1-203ENST00000471996 EPHA10Q5JZY3 1008 aa24.14■■□□□ 1.45
SORT1-203ENST00000471996 ANKRD23Q86SG2 305 aa24.14■■□□□ 1.45
SORT1-203ENST00000471996 FAM83AQ86UY5 434 aa24.14■■□□□ 1.45
SORT1-203ENST00000471996 MYPNQ86TC9 1320 aa24.13■■□□□ 1.45
SORT1-203ENST00000471996 UBXN2AP68543 259 aa24.13■■□□□ 1.45
SORT1-203ENST00000471996 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.13■■□□□ 1.45
SORT1-203ENST00000471996 ADGRA2Q96PE1 1338 aa24.12■■□□□ 1.45
SORT1-203ENST00000471996 PDHXO00330 501 aa24.12■■□□□ 1.45
SORT1-203ENST00000471996 FKBP1CQ5VVH2 108 aa24.12■■□□□ 1.45
SORT1-203ENST00000471996 DCAF15Q66K64 600 aa24.12■■□□□ 1.45
SORT1-203ENST00000471996 TEKT1Q969V4 418 aa24.12■■□□□ 1.45
SORT1-203ENST00000471996 BIN2Q9UBW5 565 aaPredicted RBP24.12■■□□□ 1.45
SORT1-203ENST00000471996 BEND3Q5T5X7 828 aa24.11■■□□□ 1.45
SORT1-203ENST00000471996 U2AF1L4Q8WU68 220 aaKnown RBP24.11■■□□□ 1.45
SORT1-203ENST00000471996 TMOD2Q9NZR1 351 aa24.11■■□□□ 1.45
SORT1-203ENST00000471996 FARP2O94887 1054 aaPredicted RBP24.1■■□□□ 1.45
SORT1-203ENST00000471996 FBXO33Q7Z6M2 555 aa24.1■■□□□ 1.45
SORT1-203ENST00000471996 TBC1D22AQ8WUA7 517 aa24.1■■□□□ 1.45
SORT1-203ENST00000471996 ZDHHC15Q96MV8 337 aa24.1■■□□□ 1.45
SORT1-203ENST00000471996 MRIQ9BWK5 157 aa24.1■■□□□ 1.45
SORT1-203ENST00000471996 ZNF341Q9BYN7 854 aa24.1■■□□□ 1.45
SORT1-203ENST00000471996 COL6A3P12111 3177 aa24.09■■□□□ 1.45
SORT1-203ENST00000471996 SOX1O00570 391 aaPredicted RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms