RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 CHST3Q7LGC8 479 aa12.41□□□□□ -0.42
APLF-204ENST00000471727 KCNG4Q8TDN1 519 aa12.41□□□□□ -0.42
APLF-204ENST00000471727 KRT23Q9C075 422 aa12.41□□□□□ -0.42
APLF-204ENST00000471727 HPS5Q9UPZ3 1129 aa12.41□□□□□ -0.42
APLF-204ENST00000471727 NIP7Q9Y221 180 aaKnown RBP eCLIP12.41□□□□□ -0.42
APLF-204ENST00000471727 MRVI1Q9Y6F6 885 aa12.41□□□□□ -0.42
APLF-204ENST00000471727 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.41□□□□□ -0.42
APLF-204ENST00000471727 SH2B2O14492 632 aaPredicted RBP12.4□□□□□ -0.42
APLF-204ENST00000471727 NR1I2O75469 434 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 LIFRP42702 1097 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 FAM160A1Q05DH4 1040 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 ADALQ6DHV7 355 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 TMED8Q6PL24 325 aaPredicted RBP12.4□□□□□ -0.42
APLF-204ENST00000471727 PNPLA7Q6ZV29 1317 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 SGMS1Q86VZ5 419 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 CCAR1Q8IX12 1150 aaKnown RBP12.4□□□□□ -0.42
APLF-204ENST00000471727 DOT1LQ8TEK3 1739 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 USP28Q96RU2 1077 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 GNL3LQ9NVN8 582 aaKnown RBP12.4□□□□□ -0.42
APLF-204ENST00000471727 POLR3EQ9NVU0 708 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 AKAP11Q9UKA4 1901 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 NRAPQ86VF7 1730 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 ARAP2Q8WZ64 1704 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 KINO60870 393 aaKnown RBP12.4□□□□□ -0.42
APLF-204ENST00000471727 ADAMTS2O95450 1211 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 METAP2P50579 478 aaKnown RBP eCLIP12.4□□□□□ -0.42
APLF-204ENST00000471727 RCAN1P53805 252 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 SF3B3Q15393 1217 aaKnown RBP12.4□□□□□ -0.42
APLF-204ENST00000471727 CAMK4Q16566 473 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 SYNE3Q6ZMZ3 975 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.4□□□□□ -0.42
APLF-204ENST00000471727 IFNL3Q8IZI9 196 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 TMTC2Q8N394 836 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 TDRD7Q8NHU6 1098 aaKnown RBP12.4□□□□□ -0.42
APLF-204ENST00000471727 NAPBQ9H115 298 aa12.4□□□□□ -0.42
APLF-204ENST00000471727 RNF41Q9H4P4 317 aaPredicted RBP12.4□□□□□ -0.42
APLF-204ENST00000471727 MYH7P12883 1935 aa12.39□□□□□ -0.43
APLF-204ENST00000471727 ITPK1Q13572 414 aa12.39□□□□□ -0.43
APLF-204ENST00000471727 RASGRF1Q13972 1273 aa12.39□□□□□ -0.43
APLF-204ENST00000471727 UBE4AQ14139 1066 aa12.39□□□□□ -0.43
APLF-204ENST00000471727 SART3Q15020 963 aaKnown RBP12.39□□□□□ -0.43
APLF-204ENST00000471727 WASF1Q92558 559 aa12.39□□□□□ -0.43
APLF-204ENST00000471727 WWC3Q9ULE0 1092 aa12.39□□□□□ -0.43
APLF-204ENST00000471727 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.39□□□□□ -0.43
APLF-204ENST00000471727 NWD2Q9ULI1 1742 aa12.39□□□□□ -0.43
APLF-204ENST00000471727 SLIT2O94813 1529 aa12.39□□□□□ -0.43
APLF-204ENST00000471727 IGSF3O75054 1194 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 ME1P48163 572 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 SF3A1Q15459 793 aaKnown RBP12.38□□□□□ -0.43
APLF-204ENST00000471727 STX1AQ16623 288 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 ANO6Q4KMQ2 910 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 TBC1D10CQ8IV04 446 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 CKAP2LQ8IYA6 745 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 MAGEB6Q8N7X4 407 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 LINC00301Q8NCQ3 95 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 ENGASEQ8NFI3 743 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 HELBQ8NG08 1087 aaPredicted RBP12.38□□□□□ -0.43
APLF-204ENST00000471727 PIBF1Q8WXW3 757 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 MRPS27Q92552 414 aaKnown RBP12.38□□□□□ -0.43
APLF-204ENST00000471727 ACSBG1Q96GR2 724 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 CBX8Q9HC52 389 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 SEC31BQ9NQW1 1179 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 ANO10Q9NW15 660 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 ZNF831Q5JPB2 1677 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 NID2Q14112 1375 aa12.38□□□□□ -0.43
APLF-204ENST00000471727 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 ZBTB22O15209 634 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 ZBTB43O43298 467 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 ZNF165P49910 485 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 CHRNDQ07001 517 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 PPP2R5BQ15173 497 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 STK38Q15208 465 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 SLC10A5Q5PT55 438 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 AKNAD1Q5T1N1 836 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
APLF-204ENST00000471727 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 APOA5Q6Q788 366 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 ANKRD18AQ8IVF6 992 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 IGDCC4Q8TDY8 1250 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 STAG1Q8WVM7 1258 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 NBPF3Q9H094 633 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 GPHNQ9NQX3 736 aaPredicted RBP12.37□□□□□ -0.43
APLF-204ENST00000471727 BSDC1Q9NW68 430 aaPredicted RBP12.37□□□□□ -0.43
APLF-204ENST00000471727 LTBP4Q8N2S1 1624 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 CNTNAP4Q9C0A0 1308 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 A0A0G2JS52 829 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 SEMA3EO15041 775 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 TOM1O60784 492 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 MBD4O95243 580 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 KIF23Q02241 960 aaPredicted RBP12.37□□□□□ -0.43
APLF-204ENST00000471727 TRIM29Q14134 588 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 TMEM67Q5HYA8 995 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 NFXL1Q6ZNB6 911 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 MFSD6Q6ZSS7 791 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 CYB5R4Q7L1T6 521 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 ILDR1Q86SU0 546 aaPredicted RBP12.37□□□□□ -0.43
APLF-204ENST00000471727 JMYQ8N9B5 988 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 FSIP1Q8NA03 581 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 NYXQ9GZU5 481 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 NAT10Q9H0A0 1025 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms