RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-208ENST00000471438 CDK12Q9NYV4 1490 aaPredicted RBP5.06□□□□□ -1.6
CSMD2-208ENST00000471438 FGD6Q6ZV73 1430 aa5.06□□□□□ -1.6
CSMD2-208ENST00000471438 BIN1O00499 593 aa5.05□□□□□ -1.6
CSMD2-208ENST00000471438 C21orf2O43822 256 aa5.05□□□□□ -1.6
CSMD2-208ENST00000471438 PSAPP07602 524 aa5.05□□□□□ -1.6
CSMD2-208ENST00000471438 CPSF6Q16630 551 aaKnown RBP eCLIP5.05□□□□□ -1.6
CSMD2-208ENST00000471438 RTN1Q16799 776 aa5.05□□□□□ -1.6
CSMD2-208ENST00000471438 ERICH6BQ5W0A0 696 aa5.05□□□□□ -1.6
CSMD2-208ENST00000471438 STAG2Q8N3U4 1231 aa5.05□□□□□ -1.6
CSMD2-208ENST00000471438 SCG3Q8WXD2 468 aaKnown RBP5.05□□□□□ -1.6
CSMD2-208ENST00000471438 SLC38A3Q99624 504 aa5.05□□□□□ -1.6
CSMD2-208ENST00000471438 C2orf49Q9BVC5 232 aaPredicted RBP5.05□□□□□ -1.6
CSMD2-208ENST00000471438 PPP1R12CQ9BZL4 782 aa5.05□□□□□ -1.6
CSMD2-208ENST00000471438 BSDC1Q9NW68 430 aaPredicted RBP5.05□□□□□ -1.6
CSMD2-208ENST00000471438 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.05□□□□□ -1.6
CSMD2-208ENST00000471438 SETD1BQ9UPS6 1966 aaKnown RBP5.05□□□□□ -1.6
CSMD2-208ENST00000471438 UHRF1BP1LA0JNW5 1464 aa5.05□□□□□ -1.6
CSMD2-208ENST00000471438 RNF17Q9BXT8 1623 aaKnown RBP5.05□□□□□ -1.6
CSMD2-208ENST00000471438 EHBP1L1Q8N3D4 1523 aa5.04□□□□□ -1.6
CSMD2-208ENST00000471438 UGGT2Q9NYU1 1516 aa5.04□□□□□ -1.6
CSMD2-208ENST00000471438 ARHGEF12Q9NZN5 1544 aa5.04□□□□□ -1.6
CSMD2-208ENST00000471438 F13BP05160 661 aa5.04□□□□□ -1.6
CSMD2-208ENST00000471438 PREPP48147 710 aa5.04□□□□□ -1.6
CSMD2-208ENST00000471438 ARSDP51689 593 aa5.04□□□□□ -1.6
CSMD2-208ENST00000471438 ANKRD34AQ69YU3 496 aa5.04□□□□□ -1.6
CSMD2-208ENST00000471438 TXNDC11Q6PKC3 985 aa5.04□□□□□ -1.6
CSMD2-208ENST00000471438 NSUN5Q96P11 429 aaKnown RBP5.04□□□□□ -1.6
CSMD2-208ENST00000471438 ANP32EQ9BTT0 268 aa5.04□□□□□ -1.6
CSMD2-208ENST00000471438 KRTAP9-3Q9BYQ3 159 aa5.04□□□□□ -1.6
CSMD2-208ENST00000471438 CCDC18Q5T9S5 1454 aa5.04□□□□□ -1.6
CSMD2-208ENST00000471438 NAIPQ13075 1403 aa5.04□□□□□ -1.6
CSMD2-208ENST00000471438 NCOA2Q15596 1464 aa5.03□□□□□ -1.6
CSMD2-208ENST00000471438 CRTC2Q53ET0 693 aaPredicted RBP5.03□□□□□ -1.6
CSMD2-208ENST00000471438 COL26A1Q96A83 441 aa5.03□□□□□ -1.6
CSMD2-208ENST00000471438 VRTNQ9H8Y1 702 aa5.03□□□□□ -1.6
CSMD2-208ENST00000471438 PAK6Q9NQU5 681 aaPredicted RBP5.03□□□□□ -1.6
CSMD2-208ENST00000471438 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.03□□□□□ -1.6
CSMD2-208ENST00000471438 MYOM3Q5VTT5 1437 aa5.03□□□□□ -1.6
CSMD2-208ENST00000471438 CYP26A1O43174 497 aa5.02□□□□□ -1.61
CSMD2-208ENST00000471438 GAS2O43903 313 aaKnown RBP5.02□□□□□ -1.61
CSMD2-208ENST00000471438 MAP4P27816 1152 aaKnown RBP5.02□□□□□ -1.61
CSMD2-208ENST00000471438 RXRBP28702 533 aa5.02□□□□□ -1.61
CSMD2-208ENST00000471438 BUD31P41223 144 aaPredicted RBP5.02□□□□□ -1.61
CSMD2-208ENST00000471438 PRELPP51888 382 aa5.02□□□□□ -1.61
CSMD2-208ENST00000471438 PTK7Q13308 1070 aa5.02□□□□□ -1.61
CSMD2-208ENST00000471438 CFAP70Q5T0N1 1121 aa5.02□□□□□ -1.61
CSMD2-208ENST00000471438 ZNF772Q68DY9 489 aaPredicted RBP5.02□□□□□ -1.61
CSMD2-208ENST00000471438 KLHL23Q8NBE8 558 aa5.02□□□□□ -1.61
CSMD2-208ENST00000471438 UBASH3BQ8TF42 649 aa5.02□□□□□ -1.61
CSMD2-208ENST00000471438 VTI1AQ96AJ9 217 aa5.02□□□□□ -1.61
CSMD2-208ENST00000471438 SIN3AQ96ST3 1273 aa5.02□□□□□ -1.61
CSMD2-208ENST00000471438 METTL22Q9BUU2 404 aaPredicted RBP5.02□□□□□ -1.61
CSMD2-208ENST00000471438 CARD10Q9BWT7 1032 aa5.02□□□□□ -1.61
CSMD2-208ENST00000471438 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
CSMD2-208ENST00000471438 RGS12O14924 1447 aa5.02□□□□□ -1.61
CSMD2-208ENST00000471438 CARMIL2Q6F5E8 1435 aa5.02□□□□□ -1.61
CSMD2-208ENST00000471438 MIA2Q96PC5 1412 aa5.02□□□□□ -1.61
CSMD2-208ENST00000471438 CEP350Q5VT06 3117 aa5.01□□□□□ -1.61
CSMD2-208ENST00000471438 DENND4BO75064 1496 aaPredicted RBP5.01□□□□□ -1.61
CSMD2-208ENST00000471438 FHOD3Q2V2M9 1422 aa5.01□□□□□ -1.61
CSMD2-208ENST00000471438 FAM196BA6NMK8 535 aa5.01□□□□□ -1.61
CSMD2-208ENST00000471438 LMOD1P29536 600 aaPredicted RBP5.01□□□□□ -1.61
CSMD2-208ENST00000471438 CDC25BP30305 580 aa5.01□□□□□ -1.61
CSMD2-208ENST00000471438 RANGAP1P46060 587 aaPredicted RBP5.01□□□□□ -1.61
CSMD2-208ENST00000471438 DPYDQ12882 1025 aa5.01□□□□□ -1.61
CSMD2-208ENST00000471438 DDX10Q13206 875 aaKnown RBP5.01□□□□□ -1.61
CSMD2-208ENST00000471438 FAM117BQ6P1L5 589 aa5.01□□□□□ -1.61
CSMD2-208ENST00000471438 ANKMY2Q8IV38 441 aa5.01□□□□□ -1.61
CSMD2-208ENST00000471438 ARXQ96QS3 562 aa5.01□□□□□ -1.61
CSMD2-208ENST00000471438 SHANK2Q9UPX8 1470 aa5□□□□□ -1.61
CSMD2-208ENST00000471438 C3P01024 1663 aa5□□□□□ -1.61
CSMD2-208ENST00000471438 TM4SF5O14894 197 aa5□□□□□ -1.61
CSMD2-208ENST00000471438 FSCN2O14926 492 aa5□□□□□ -1.61
CSMD2-208ENST00000471438 DDX3YO15523 660 aaKnown RBP5□□□□□ -1.61
CSMD2-208ENST00000471438 ANP32CO43423 234 aa5□□□□□ -1.61
CSMD2-208ENST00000471438 MMP20O60882 483 aa5□□□□□ -1.61
CSMD2-208ENST00000471438 IGFBP4P22692 258 aa5□□□□□ -1.61
CSMD2-208ENST00000471438 CDC27P30260 824 aa5□□□□□ -1.61
CSMD2-208ENST00000471438 FDX2Q6P4F2 183 aa5□□□□□ -1.61
CSMD2-208ENST00000471438 FOXD4L4Q8WXT5 416 aaPredicted RBP5□□□□□ -1.61
CSMD2-208ENST00000471438 LACRTQ9GZZ8 138 aa5□□□□□ -1.61
CSMD2-208ENST00000471438 RNF208Q9H0X6 261 aa5□□□□□ -1.61
CSMD2-208ENST00000471438 KLK14Q9P0G3 267 aa5□□□□□ -1.61
CSMD2-208ENST00000471438 ZFYVE16Q7Z3T8 1539 aa5□□□□□ -1.61
CSMD2-208ENST00000471438 USP17L15C9J2P7 530 aa4.99□□□□□ -1.61
CSMD2-208ENST00000471438 USP17L10C9JJH3 530 aa4.99□□□□□ -1.61
CSMD2-208ENST00000471438 USP17L13C9JLJ4 530 aa4.99□□□□□ -1.61
CSMD2-208ENST00000471438 USP17L12C9JPN9 530 aa4.99□□□□□ -1.61
CSMD2-208ENST00000471438 USP17L11C9JVI0 530 aa4.99□□□□□ -1.61
CSMD2-208ENST00000471438 USP17L21D6R901 530 aa4.99□□□□□ -1.61
CSMD2-208ENST00000471438 USP17L18D6R9N7 530 aa4.99□□□□□ -1.61
CSMD2-208ENST00000471438 USP17L22D6RA61 530 aa4.99□□□□□ -1.61
CSMD2-208ENST00000471438 USP17L17D6RBQ6 530 aa4.99□□□□□ -1.61
CSMD2-208ENST00000471438 USP17L19D6RCP7 530 aa4.99□□□□□ -1.61
CSMD2-208ENST00000471438 USP17L20D6RJB6 530 aa4.99□□□□□ -1.61
CSMD2-208ENST00000471438 EGFRP00533 1210 aa4.99□□□□□ -1.61
CSMD2-208ENST00000471438 HOXD8P13378 290 aaPredicted RBP4.99□□□□□ -1.61
CSMD2-208ENST00000471438 RFX1P22670 979 aa4.99□□□□□ -1.61
CSMD2-208ENST00000471438 SOX18P35713 384 aa4.99□□□□□ -1.61
CSMD2-208ENST00000471438 USP17L24Q0WX57 530 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms