RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 IFIT2P09913 472 aaKnown RBP21.72■■□□□ 1.07
VPS72-204ENST00000471423 SPDYE6P0CI01 402 aa21.72■■□□□ 1.07
VPS72-204ENST00000471423 CRKP46108 304 aa21.72■■□□□ 1.07
VPS72-204ENST00000471423 FMR1Q06787 632 aaKnown RBP eCLIP21.72■■□□□ 1.07
VPS72-204ENST00000471423 KRT26Q7Z3Y9 468 aa21.72■■□□□ 1.07
VPS72-204ENST00000471423 ZGPATQ8N5A5 531 aaKnown RBP21.72■■□□□ 1.07
VPS72-204ENST00000471423 AKAP11Q9UKA4 1901 aa21.71■■□□□ 1.07
VPS72-204ENST00000471423 ADM5C9JUS6 153 aa21.71■■□□□ 1.07
VPS72-204ENST00000471423 LDHBP07195 334 aaKnown RBP21.71■■□□□ 1.07
VPS72-204ENST00000471423 HDAC1Q13547 482 aaPredicted RBP21.71■■□□□ 1.07
VPS72-204ENST00000471423 CDC37L1Q7L3B6 337 aa21.71■■□□□ 1.07
VPS72-204ENST00000471423 USP48Q86UV5 1035 aa21.71■■□□□ 1.07
VPS72-204ENST00000471423 ZNF512BQ96KM6 892 aaPredicted RBP21.71■■□□□ 1.07
VPS72-204ENST00000471423 SNRKQ9NRH2 765 aa21.71■■□□□ 1.07
VPS72-204ENST00000471423 ABCF2Q9UG63 623 aa21.71■■□□□ 1.07
VPS72-204ENST00000471423 ECM29Q5VYK3 1845 aa21.71■■□□□ 1.07
VPS72-204ENST00000471423 APLP1P51693 650 aa21.7■■□□□ 1.06
VPS72-204ENST00000471423 TEKT1Q969V4 418 aa21.7■■□□□ 1.06
VPS72-204ENST00000471423 PRMT6Q96LA8 375 aaPredicted RBP21.7■■□□□ 1.06
VPS72-204ENST00000471423 SCAF8Q9UPN6 1271 aaKnown RBP21.7■■□□□ 1.06
VPS72-204ENST00000471423 AOX1Q06278 1338 aa21.7■■□□□ 1.06
VPS72-204ENST00000471423 PITPNM2Q9BZ72 1349 aa21.7■■□□□ 1.06
VPS72-204ENST00000471423 POLR2AP24928 1970 aaKnown RBP21.69■■□□□ 1.06
VPS72-204ENST00000471423 HDLBPQ00341 1268 aaKnown RBP21.69■■□□□ 1.06
VPS72-204ENST00000471423 DIXDC1Q155Q3 683 aa21.69■■□□□ 1.06
VPS72-204ENST00000471423 DLK2Q6UY11 383 aa21.69■■□□□ 1.06
VPS72-204ENST00000471423 TBC1D9Q6ZT07 1266 aa21.69■■□□□ 1.06
VPS72-204ENST00000471423 SULF1Q8IWU6 871 aa21.69■■□□□ 1.06
VPS72-204ENST00000471423 CLRN2A0PK11 232 aa21.68■■□□□ 1.06
VPS72-204ENST00000471423 MYO1BO43795 1136 aa21.68■■□□□ 1.06
VPS72-204ENST00000471423 ZAP70P43403 619 aa21.67■■□□□ 1.06
VPS72-204ENST00000471423 HTRA3P83110 453 aa21.67■■□□□ 1.06
VPS72-204ENST00000471423 SPTY2D1Q68D10 685 aaPredicted RBP21.67■■□□□ 1.06
VPS72-204ENST00000471423 DZIP1Q86YF9 867 aaKnown RBP21.67■■□□□ 1.06
VPS72-204ENST00000471423 MRIQ9BWK5 157 aa21.67■■□□□ 1.06
VPS72-204ENST00000471423 NDUFB9Q9Y6M9 179 aa21.67■■□□□ 1.06
VPS72-204ENST00000471423 CYP2E1P05181 493 aaPredicted RBP21.66■■□□□ 1.06
VPS72-204ENST00000471423 HHIPL2Q6UWX4 724 aa21.66■■□□□ 1.06
VPS72-204ENST00000471423 ERICH6Q7L0X2 663 aa21.66■■□□□ 1.06
VPS72-204ENST00000471423 APOBEC3FQ8IUX4 373 aaKnown RBP21.66■■□□□ 1.06
VPS72-204ENST00000471423 ZDHHC15Q96MV8 337 aa21.66■■□□□ 1.06
VPS72-204ENST00000471423 TDRD3Q9H7E2 651 aaKnown RBP21.66■■□□□ 1.06
VPS72-204ENST00000471423 DAGLAQ9Y4D2 1042 aa21.66■■□□□ 1.06
VPS72-204ENST00000471423 TRPM7Q96QT4 1865 aa21.66■■□□□ 1.06
VPS72-204ENST00000471423 GCC1Q96CN9 775 aa21.65■■□□□ 1.06
VPS72-204ENST00000471423 RWDD1Q9H446 243 aaPredicted RBP21.65■■□□□ 1.06
VPS72-204ENST00000471423 ZNF408Q9H9D4 720 aa21.65■■□□□ 1.06
VPS72-204ENST00000471423 VEZTQ9HBM0 779 aa21.65■■□□□ 1.06
VPS72-204ENST00000471423 RAI14Q9P0K7 980 aa21.65■■□□□ 1.06
VPS72-204ENST00000471423 MAST2Q6P0Q8 1798 aa21.65■■□□□ 1.06
VPS72-204ENST00000471423 CELF2O95319 508 aaKnown RBP21.64■■□□□ 1.05
VPS72-204ENST00000471423 IGHDP01880 384 aa21.64■■□□□ 1.05
VPS72-204ENST00000471423 MECOMQ03112 1051 aa21.64■■□□□ 1.05
VPS72-204ENST00000471423 SPDYE2Q495Y8 402 aa21.64■■□□□ 1.05
VPS72-204ENST00000471423 APOBEC3HQ6NTF7 200 aaKnown RBP21.64■■□□□ 1.05
VPS72-204ENST00000471423 LRP2BPQ9P2M1 347 aa21.64■■□□□ 1.05
VPS72-204ENST00000471423 ZNF70Q9UC06 446 aaPredicted RBP21.64■■□□□ 1.05
VPS72-204ENST00000471423 MYH2Q9UKX2 1941 aa21.63■■□□□ 1.05
VPS72-204ENST00000471423 TMEM88BA6NKF7 163 aa21.63■■□□□ 1.05
VPS72-204ENST00000471423 ZNF384Q8TF68 577 aa21.63■■□□□ 1.05
VPS72-204ENST00000471423 CDCA5Q96FF9 252 aa21.63■■□□□ 1.05
VPS72-204ENST00000471423 PIH1D3Q9NQM4 214 aaKnown RBP21.63■■□□□ 1.05
VPS72-204ENST00000471423 CREBZFQ9NS37 354 aa21.63■■□□□ 1.05
VPS72-204ENST00000471423 ANKRD45Q5TZF3 282 aa21.62■■□□□ 1.05
VPS72-204ENST00000471423 CST9Q5W186 159 aa21.62■■□□□ 1.05
VPS72-204ENST00000471423 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.62■■□□□ 1.05
VPS72-204ENST00000471423 NSUN4Q96CB9 384 aaKnown RBP21.62■■□□□ 1.05
VPS72-204ENST00000471423 ANTXR1Q9H6X2 564 aa21.62■■□□□ 1.05
VPS72-204ENST00000471423 MYO5AQ9Y4I1 1855 aaKnown RBP21.62■■□□□ 1.05
VPS72-204ENST00000471423 MROH7-TTC4A0A0A0MT08 1334 aa21.61■■□□□ 1.05
VPS72-204ENST00000471423 GAKO14976 1311 aa21.61■■□□□ 1.05
VPS72-204ENST00000471423 ATP5JP18859 108 aa21.61■■□□□ 1.05
VPS72-204ENST00000471423 PRAMEF18Q5VWM3 479 aa21.61■■□□□ 1.05
VPS72-204ENST00000471423 SLF2Q8IX21 1173 aa21.61■■□□□ 1.05
VPS72-204ENST00000471423 DNAJC2Q99543 621 aaKnown RBP21.61■■□□□ 1.05
VPS72-204ENST00000471423 ZBTB47Q9UFB7 747 aaPredicted RBP21.61■■□□□ 1.05
VPS72-204ENST00000471423 DOCK2Q92608 1830 aa21.6■■□□□ 1.05
VPS72-204ENST00000471423 CACNB3P54284 484 aa21.6■■□□□ 1.05
VPS72-204ENST00000471423 TSHZ3Q63HK5 1081 aa21.6■■□□□ 1.05
VPS72-204ENST00000471423 SMC5Q8IY18 1101 aa21.6■■□□□ 1.05
VPS72-204ENST00000471423 GPATCH3Q96I76 525 aa21.6■■□□□ 1.05
VPS72-204ENST00000471423 DEFB129Q9H1M3 183 aa21.6■■□□□ 1.05
VPS72-204ENST00000471423 BOLA2Q9H3K6 86 aa21.6■■□□□ 1.05
VPS72-204ENST00000471423 ECHDC1Q9NTX5 307 aa21.6■■□□□ 1.05
VPS72-204ENST00000471423 CEP350Q5VT06 3117 aa21.6■■□□□ 1.05
VPS72-204ENST00000471423 TCP10L2B9ZVM9 353 aa21.59■■□□□ 1.05
VPS72-204ENST00000471423 IDH1O75874 414 aaKnown RBP21.59■■□□□ 1.05
VPS72-204ENST00000471423 CENPBP07199 599 aaPredicted RBP21.59■■□□□ 1.05
VPS72-204ENST00000471423 GSTO1P78417 241 aa21.59■■□□□ 1.05
VPS72-204ENST00000471423 TNFAIP1Q13829 316 aa21.59■■□□□ 1.05
VPS72-204ENST00000471423 CDC42EP5Q6NZY7 148 aa21.59■■□□□ 1.05
VPS72-204ENST00000471423 OTUD7AQ8TE49 926 aaPredicted RBP21.59■■□□□ 1.05
VPS72-204ENST00000471423 TMOD2Q9NZR1 351 aa21.59■■□□□ 1.05
VPS72-204ENST00000471423 GOLIM4O00461 696 aa21.58■■□□□ 1.05
VPS72-204ENST00000471423 BTDP43251 543 aa21.58■■□□□ 1.05
VPS72-204ENST00000471423 RASA3Q14644 834 aa21.58■■□□□ 1.05
VPS72-204ENST00000471423 B4GALNT3Q6L9W6 998 aa21.58■■□□□ 1.05
VPS72-204ENST00000471423 NAA16Q6N069 864 aaPredicted RBP21.58■■□□□ 1.05
VPS72-204ENST00000471423 EDC3Q96F86 508 aaKnown RBP21.58■■□□□ 1.05
VPS72-204ENST00000471423 FAM163AQ96GL9 167 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms