RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CLRN2A0PK11 232 aa16.79■□□□□ 0.28
HMGN1-211ENST00000471260 CAPN15O75808 1086 aa16.79■□□□□ 0.28
HMGN1-211ENST00000471260 TRIM27P14373 513 aa16.79■□□□□ 0.28
HMGN1-211ENST00000471260 CRKP46108 304 aa16.79■□□□□ 0.28
HMGN1-211ENST00000471260 HNRNPUQ00839 825 aaKnown RBP eCLIP16.79■□□□□ 0.28
HMGN1-211ENST00000471260 CHAF1AQ13111 956 aaPredicted RBP16.79■□□□□ 0.28
HMGN1-211ENST00000471260 MTX1Q13505 466 aa16.79■□□□□ 0.28
HMGN1-211ENST00000471260 WDR66Q8TBY9 1149 aa16.79■□□□□ 0.28
HMGN1-211ENST00000471260 ANGEL1Q9UNK9 670 aaKnown RBP16.79■□□□□ 0.28
HMGN1-211ENST00000471260 IQSEC3Q9UPP2 1182 aaPredicted RBP16.79■□□□□ 0.28
HMGN1-211ENST00000471260 TRPA1O75762 1119 aa16.78■□□□□ 0.28
HMGN1-211ENST00000471260 TM4SF4P48230 202 aa16.78■□□□□ 0.28
HMGN1-211ENST00000471260 RASA3Q14644 834 aa16.78■□□□□ 0.28
HMGN1-211ENST00000471260 TEKT1Q969V4 418 aa16.78■□□□□ 0.28
HMGN1-211ENST00000471260 GNL3LQ9NVN8 582 aaKnown RBP16.78■□□□□ 0.28
HMGN1-211ENST00000471260 ZNF70Q9UC06 446 aaPredicted RBP16.78■□□□□ 0.28
HMGN1-211ENST00000471260 BCAR3O75815 825 aa16.77■□□□□ 0.28
HMGN1-211ENST00000471260 TNNI2P48788 182 aa16.77■□□□□ 0.28
HMGN1-211ENST00000471260 SREBF2Q12772 1141 aa16.77■□□□□ 0.28
HMGN1-211ENST00000471260 ATP2B3Q16720 1220 aa16.77■□□□□ 0.28
HMGN1-211ENST00000471260 FRAT1Q92837 279 aaPredicted RBP16.77■□□□□ 0.28
HMGN1-211ENST00000471260 SIL1Q9H173 461 aa16.77■□□□□ 0.28
HMGN1-211ENST00000471260 TDRD3Q9H7E2 651 aaKnown RBP16.77■□□□□ 0.28
HMGN1-211ENST00000471260 SEMA3EO15041 775 aa16.76■□□□□ 0.27
HMGN1-211ENST00000471260 IREB2P48200 963 aaKnown RBP16.76■□□□□ 0.27
HMGN1-211ENST00000471260 INHBEP58166 350 aa16.76■□□□□ 0.27
HMGN1-211ENST00000471260 PRKG1Q13976 671 aa16.76■□□□□ 0.27
HMGN1-211ENST00000471260 NBPF12Q5TAG4 269 aaPredicted RBP16.76■□□□□ 0.27
HMGN1-211ENST00000471260 ZKSCAN2Q63HK3 967 aa16.76■□□□□ 0.27
HMGN1-211ENST00000471260 HHIPL2Q6UWX4 724 aa16.76■□□□□ 0.27
HMGN1-211ENST00000471260 SLC10A4Q96EP9 437 aa16.76■□□□□ 0.27
HMGN1-211ENST00000471260 ABHD8Q96I13 439 aa16.76■□□□□ 0.27
HMGN1-211ENST00000471260 ZDHHC15Q96MV8 337 aa16.76■□□□□ 0.27
HMGN1-211ENST00000471260 SRGAP3O43295 1099 aa16.75■□□□□ 0.27
HMGN1-211ENST00000471260 GNAI2P04899 355 aa16.75■□□□□ 0.27
HMGN1-211ENST00000471260 ZBTB48P10074 688 aaPredicted RBP16.75■□□□□ 0.27
HMGN1-211ENST00000471260 GRIK5Q16478 980 aa16.75■□□□□ 0.27
HMGN1-211ENST00000471260 FKBP1CQ5VVH2 108 aa16.75■□□□□ 0.27
HMGN1-211ENST00000471260 SPRYD7Q5W111 196 aa16.75■□□□□ 0.27
HMGN1-211ENST00000471260 PA2G4Q9UQ80 394 aaKnown RBP16.75■□□□□ 0.27
HMGN1-211ENST00000471260 CASP8AP2Q9UKL3 1982 aa16.75■□□□□ 0.27
HMGN1-211ENST00000471260 AOX1Q06278 1338 aa16.74■□□□□ 0.27
HMGN1-211ENST00000471260 USP2O75604 605 aaPredicted RBP16.74■□□□□ 0.27
HMGN1-211ENST00000471260 ANKRD13AQ8IZ07 590 aa16.74■□□□□ 0.27
HMGN1-211ENST00000471260 TMOD2Q9NZR1 351 aa16.74■□□□□ 0.27
HMGN1-211ENST00000471260 DENND2AQ9ULE3 1009 aa16.74■□□□□ 0.27
HMGN1-211ENST00000471260 AKAP2Q9Y2D5 859 aa16.74■□□□□ 0.27
HMGN1-211ENST00000471260 ZBED9Q6R2W3 1325 aa16.73■□□□□ 0.27
HMGN1-211ENST00000471260 SALL1Q9NSC2 1324 aa16.73■□□□□ 0.27
HMGN1-211ENST00000471260 SSC5DA1L4H1 1573 aa16.73■□□□□ 0.27
HMGN1-211ENST00000471260 MANSC4A6NHS7 340 aaPredicted RBP16.73■□□□□ 0.27
HMGN1-211ENST00000471260 NOM1Q5C9Z4 860 aaKnown RBP16.73■□□□□ 0.27
HMGN1-211ENST00000471260 FAM83AQ86UY5 434 aa16.73■□□□□ 0.27
HMGN1-211ENST00000471260 TEPSINQ96N21 525 aa16.73■□□□□ 0.27
HMGN1-211ENST00000471260 CFHR5Q9BXR6 569 aa16.73■□□□□ 0.27
HMGN1-211ENST00000471260 TCP10L2B9ZVM9 353 aa16.72■□□□□ 0.27
HMGN1-211ENST00000471260 ALDH1A1P00352 501 aa16.72■□□□□ 0.27
HMGN1-211ENST00000471260 APOBEC3HQ6NTF7 200 aaKnown RBP16.72■□□□□ 0.27
HMGN1-211ENST00000471260 ZGPATQ8N5A5 531 aaKnown RBP16.72■□□□□ 0.27
HMGN1-211ENST00000471260 CLUAP1Q96AJ1 413 aa16.72■□□□□ 0.27
HMGN1-211ENST00000471260 HOOK2Q96ED9 719 aa16.72■□□□□ 0.27
HMGN1-211ENST00000471260 NEFLP07196 543 aa16.71■□□□□ 0.27
HMGN1-211ENST00000471260 DGKZQ13574 1117 aa16.71■□□□□ 0.27
HMGN1-211ENST00000471260 CCDC102BQ68D86 513 aa16.71■□□□□ 0.27
HMGN1-211ENST00000471260 MCOLN1Q9GZU1 580 aa16.71■□□□□ 0.27
HMGN1-211ENST00000471260 FZD1Q9UP38 647 aa16.71■□□□□ 0.27
HMGN1-211ENST00000471260 PDS5AQ29RF7 1337 aaKnown RBP16.7■□□□□ 0.26
HMGN1-211ENST00000471260 MYH13Q9UKX3 1938 aa16.7■□□□□ 0.26
HMGN1-211ENST00000471260 LDHBP07195 334 aaKnown RBP16.7■□□□□ 0.26
HMGN1-211ENST00000471260 PHKA1P46020 1223 aa16.7■□□□□ 0.26
HMGN1-211ENST00000471260 TMEM57Q8N5G2 664 aa16.7■□□□□ 0.26
HMGN1-211ENST00000471260 WNK4Q96J92 1243 aa16.7■□□□□ 0.26
HMGN1-211ENST00000471260 TMEM39BQ9GZU3 492 aa16.7■□□□□ 0.26
HMGN1-211ENST00000471260 TNNQ9UQP3 1299 aa16.7■□□□□ 0.26
HMGN1-211ENST00000471260 A0A1B0GUL7 405 aa16.69■□□□□ 0.26
HMGN1-211ENST00000471260 TIMM10P62072 90 aa16.69■□□□□ 0.26
HMGN1-211ENST00000471260 MKRN3Q13064 507 aaKnown RBP16.69■□□□□ 0.26
HMGN1-211ENST00000471260 MVPQ14764 893 aaKnown RBP16.69■□□□□ 0.26
HMGN1-211ENST00000471260 FTSJ3Q8IY81 847 aaKnown RBP16.69■□□□□ 0.26
HMGN1-211ENST00000471260 CLMNQ96JQ2 1002 aa16.69■□□□□ 0.26
HMGN1-211ENST00000471260 RPAP1Q9BWH6 1393 aaPredicted RBP16.68■□□□□ 0.26
HMGN1-211ENST00000471260 TBC1D8O95759 1140 aa16.68■□□□□ 0.26
HMGN1-211ENST00000471260 PRDX5P30044 214 aa16.68■□□□□ 0.26
HMGN1-211ENST00000471260 MAP3K9P80192 1104 aa16.68■□□□□ 0.26
HMGN1-211ENST00000471260 TFCP2Q12800 502 aa16.68■□□□□ 0.26
HMGN1-211ENST00000471260 G3BP1Q13283 466 aaKnown RBP eCLIP16.68■□□□□ 0.26
HMGN1-211ENST00000471260 OTUD7BQ6GQQ9 843 aa16.68■□□□□ 0.26
HMGN1-211ENST00000471260 XAGE2Q96GT9 111 aa16.68■□□□□ 0.26
HMGN1-211ENST00000471260 PNMA6EA0A0J9YXQ4 647 aa16.67■□□□□ 0.26
HMGN1-211ENST00000471260 ADORA1P30542 326 aa16.67■□□□□ 0.26
HMGN1-211ENST00000471260 PKN2Q16513 984 aaKnown RBP16.67■□□□□ 0.26
HMGN1-211ENST00000471260 SPTY2D1Q68D10 685 aaPredicted RBP16.67■□□□□ 0.26
HMGN1-211ENST00000471260 CTU1Q7Z7A3 348 aaKnown RBP16.67■□□□□ 0.26
HMGN1-211ENST00000471260 IFNL1Q8IU54 200 aa16.67■□□□□ 0.26
HMGN1-211ENST00000471260 SLF2Q8IX21 1173 aa16.67■□□□□ 0.26
HMGN1-211ENST00000471260 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.67■□□□□ 0.26
HMGN1-211ENST00000471260 FAM151AQ8WW52 585 aa16.67■□□□□ 0.26
HMGN1-211ENST00000471260 DAGLAQ9Y4D2 1042 aa16.67■□□□□ 0.26
HMGN1-211ENST00000471260 TESPA1A2RU30 521 aaPredicted RBP16.66■□□□□ 0.26
HMGN1-211ENST00000471260 GPR25O00155 361 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms