RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 NANOS1Q8WY41 292 aaKnown RBP9.98□□□□□ -0.81
LDHB-206ENST00000470985 IP6K1Q92551 441 aa9.98□□□□□ -0.81
LDHB-206ENST00000470985 HHIPL1Q96JK4 782 aa9.98□□□□□ -0.81
LDHB-206ENST00000470985 SMG6Q86US8 1419 aaKnown RBP9.98□□□□□ -0.81
LDHB-206ENST00000470985 MYCP01106 439 aaPredicted RBP9.97□□□□□ -0.81
LDHB-206ENST00000470985 EIF4G2P78344 907 aaKnown RBP eCLIP9.97□□□□□ -0.81
LDHB-206ENST00000470985 BICDL1Q6ZP65 573 aa9.97□□□□□ -0.81
LDHB-206ENST00000470985 PRICKLE2Q7Z3G6 844 aa9.97□□□□□ -0.81
LDHB-206ENST00000470985 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.97□□□□□ -0.81
LDHB-206ENST00000470985 VWA5B2Q8N398 1253 aa9.97□□□□□ -0.81
LDHB-206ENST00000470985 PCDHB11Q9Y5F2 797 aa9.97□□□□□ -0.81
LDHB-206ENST00000470985 MUC3AQ02505 3323 aa9.97□□□□□ -0.81
LDHB-206ENST00000470985 CNTNAP4Q9C0A0 1308 aa9.97□□□□□ -0.81
LDHB-206ENST00000470985 SOX1O00570 391 aaPredicted RBP9.96□□□□□ -0.82
LDHB-206ENST00000470985 PLA2G5P39877 138 aa9.96□□□□□ -0.82
LDHB-206ENST00000470985 RNF144AP50876 292 aaPredicted RBP9.96□□□□□ -0.82
LDHB-206ENST00000470985 MTMR14Q8NCE2 650 aa9.96□□□□□ -0.82
LDHB-206ENST00000470985 CNTNAP3BQ96NU0 1288 aa9.96□□□□□ -0.82
LDHB-206ENST00000470985 CNTNAP3Q9BZ76 1288 aa9.96□□□□□ -0.82
LDHB-206ENST00000470985 SNRKQ9NRH2 765 aa9.96□□□□□ -0.82
LDHB-206ENST00000470985 ATG3Q9NT62 314 aa9.96□□□□□ -0.82
LDHB-206ENST00000470985 COL5A3P25940 1745 aaPredicted RBP9.96□□□□□ -0.82
LDHB-206ENST00000470985 AFDNP55196 1824 aaKnown RBP9.96□□□□□ -0.82
LDHB-206ENST00000470985 FAM155AB1AL88 458 aaPredicted RBP9.95□□□□□ -0.82
LDHB-206ENST00000470985 H0YIN7 160 aa9.95□□□□□ -0.82
LDHB-206ENST00000470985 GTF2E1P29083 439 aaPredicted RBP9.95□□□□□ -0.82
LDHB-206ENST00000470985 GPC1P35052 558 aa9.95□□□□□ -0.82
LDHB-206ENST00000470985 PKN2Q16513 984 aaKnown RBP9.95□□□□□ -0.82
LDHB-206ENST00000470985 NBPF6Q5VWK0 638 aa9.95□□□□□ -0.82
LDHB-206ENST00000470985 ZNF622Q969S3 477 aaKnown RBP eCLIP9.95□□□□□ -0.82
LDHB-206ENST00000470985 NBPF4Q96M43 638 aa9.95□□□□□ -0.82
LDHB-206ENST00000470985 COL11A2P13942 1736 aaPredicted RBP9.95□□□□□ -0.82
LDHB-206ENST00000470985 NRXN2Q9P2S2 1712 aa9.95□□□□□ -0.82
LDHB-206ENST00000470985 MYH14Q7Z406 1995 aaKnown RBP9.95□□□□□ -0.82
LDHB-206ENST00000470985 CGNL1Q0VF96 1302 aa9.94□□□□□ -0.82
LDHB-206ENST00000470985 A0A1W2PRU2 124 aa9.94□□□□□ -0.82
LDHB-206ENST00000470985 ERVK-9P63128 1117 aa9.94□□□□□ -0.82
LDHB-206ENST00000470985 KIF23Q02241 960 aaPredicted RBP9.94□□□□□ -0.82
LDHB-206ENST00000470985 ZNF408Q9H9D4 720 aa9.94□□□□□ -0.82
LDHB-206ENST00000470985 PAPPA2Q9BXP8 1791 aa9.93□□□□□ -0.82
LDHB-206ENST00000470985 MON2Q7Z3U7 1717 aa9.93□□□□□ -0.82
LDHB-206ENST00000470985 KTN1Q86UP2 1357 aaKnown RBP9.93□□□□□ -0.82
LDHB-206ENST00000470985 EN2P19622 333 aaPredicted RBP9.93□□□□□ -0.82
LDHB-206ENST00000470985 NFIXQ14938 502 aa9.93□□□□□ -0.82
LDHB-206ENST00000470985 FBXO46Q6PJ61 603 aaPredicted RBP9.93□□□□□ -0.82
LDHB-206ENST00000470985 RAPGEF4Q8WZA2 1011 aa9.93□□□□□ -0.82
LDHB-206ENST00000470985 GMCL1Q96IK5 515 aa9.93□□□□□ -0.82
LDHB-206ENST00000470985 MPHOSPH9Q99550 1183 aa9.93□□□□□ -0.82
LDHB-206ENST00000470985 GLIS2Q9BZE0 524 aaPredicted RBP9.93□□□□□ -0.82
LDHB-206ENST00000470985 TMOD3Q9NYL9 352 aa9.93□□□□□ -0.82
LDHB-206ENST00000470985 KIAA0100Q14667 2235 aaKnown RBP9.92□□□□□ -0.82
LDHB-206ENST00000470985 MAP3K19Q56UN5 1328 aa9.92□□□□□ -0.82
LDHB-206ENST00000470985 H7C1W4 665 aa9.92□□□□□ -0.82
LDHB-206ENST00000470985 TATP17735 454 aaPredicted RBP9.92□□□□□ -0.82
LDHB-206ENST00000470985 EPS15P42566 896 aa9.92□□□□□ -0.82
LDHB-206ENST00000470985 ZNF296Q8WUU4 475 aaPredicted RBP9.92□□□□□ -0.82
LDHB-206ENST00000470985 ZNF277Q9NRM2 450 aaPredicted RBP9.92□□□□□ -0.82
LDHB-206ENST00000470985 HDAC9Q9UKV0 1011 aa9.92□□□□□ -0.82
LDHB-206ENST00000470985 SERPINB2P05120 415 aa9.91□□□□□ -0.82
LDHB-206ENST00000470985 HOXC9P31274 260 aa9.91□□□□□ -0.82
LDHB-206ENST00000470985 SCNN1DP51172 638 aa9.91□□□□□ -0.82
LDHB-206ENST00000470985 HUNKP57058 714 aa9.91□□□□□ -0.82
LDHB-206ENST00000470985 USPL1Q5W0Q7 1092 aa9.91□□□□□ -0.82
LDHB-206ENST00000470985 RIPOR1Q6ZS17 1223 aa9.91□□□□□ -0.82
LDHB-206ENST00000470985 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.91□□□□□ -0.82
LDHB-206ENST00000470985 DCAF11Q8TEB1 546 aa9.91□□□□□ -0.82
LDHB-206ENST00000470985 SNX27Q96L92 541 aa9.91□□□□□ -0.82
LDHB-206ENST00000470985 TTC28Q96AY4 2481 aa9.91□□□□□ -0.82
LDHB-206ENST00000470985 CENPJQ9HC77 1338 aaPredicted RBP9.9□□□□□ -0.82
LDHB-206ENST00000470985 LOC105371045A0A1W2PR82 267 aa9.9□□□□□ -0.82
LDHB-206ENST00000470985 FBLN1P23142 703 aa9.9□□□□□ -0.82
LDHB-206ENST00000470985 USP4Q13107 963 aa9.9□□□□□ -0.82
LDHB-206ENST00000470985 SLFNL1Q499Z3 407 aa9.9□□□□□ -0.82
LDHB-206ENST00000470985 FOXD4L5Q5VV16 416 aaPredicted RBP9.9□□□□□ -0.82
LDHB-206ENST00000470985 GPC2Q8N158 579 aa9.9□□□□□ -0.82
LDHB-206ENST00000470985 GPR161Q8N6U8 529 aaKnown RBP9.9□□□□□ -0.82
LDHB-206ENST00000470985 KDF1Q8NAX2 398 aaPredicted RBP9.9□□□□□ -0.82
LDHB-206ENST00000470985 FAM122AQ96E09 287 aa9.9□□□□□ -0.82
LDHB-206ENST00000470985 CEP126Q9P2H0 1117 aa9.9□□□□□ -0.82
LDHB-206ENST00000470985 LAMB4A4D0S4 1761 aa9.9□□□□□ -0.82
LDHB-206ENST00000470985 ANKRD31Q8N7Z5 1873 aa9.89□□□□□ -0.83
LDHB-206ENST00000470985 SBNO2Q9Y2G9 1366 aa9.89□□□□□ -0.83
LDHB-206ENST00000470985 SLX4Q8IY92 1834 aa9.89□□□□□ -0.83
LDHB-206ENST00000470985 FZD9O00144 591 aa9.89□□□□□ -0.83
LDHB-206ENST00000470985 GNRH1P01148 92 aa9.89□□□□□ -0.83
LDHB-206ENST00000470985 RHOQP17081 205 aa9.89□□□□□ -0.83
LDHB-206ENST00000470985 CLN3Q13286 438 aa9.89□□□□□ -0.83
LDHB-206ENST00000470985 PRPF40BQ6NWY9 871 aaKnown RBP9.89□□□□□ -0.83
LDHB-206ENST00000470985 DLK2Q6UY11 383 aa9.89□□□□□ -0.83
LDHB-206ENST00000470985 CSRNP1Q96S65 589 aa9.89□□□□□ -0.83
LDHB-206ENST00000470985 PRO3102Q9H379 93 aa9.89□□□□□ -0.83
LDHB-206ENST00000470985 GTF3C3Q9Y5Q9 886 aa9.89□□□□□ -0.83
LDHB-206ENST00000470985 GJA3Q9Y6H8 435 aa9.89□□□□□ -0.83
LDHB-206ENST00000470985 COL4A5P29400 1685 aa9.88□□□□□ -0.83
LDHB-206ENST00000470985 LMOD1P29536 600 aaPredicted RBP9.88□□□□□ -0.83
LDHB-206ENST00000470985 CRKLP46109 303 aaKnown RBP9.88□□□□□ -0.83
LDHB-206ENST00000470985 WWC1Q8IX03 1113 aa9.88□□□□□ -0.83
LDHB-206ENST00000470985 SVOPQ8N4V2 548 aa9.88□□□□□ -0.83
LDHB-206ENST00000470985 GAS2L1Q99501 681 aaPredicted RBP9.88□□□□□ -0.83
LDHB-206ENST00000470985 BCORQ6W2J9 1755 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms