RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 PPP1R42Q7Z4L9 355 aa7.8□□□□□ -1.16
VARS-222ENST00000470953 GAS2L2Q8NHY3 880 aa7.8□□□□□ -1.16
VARS-222ENST00000470953 TBC1D16Q8TBP0 767 aa7.8□□□□□ -1.16
VARS-222ENST00000470953 PRDM12Q9H4Q4 367 aa7.8□□□□□ -1.16
VARS-222ENST00000470953 ZNF576Q9H609 170 aa7.8□□□□□ -1.16
VARS-222ENST00000470953 CD320Q9NPF0 282 aa7.8□□□□□ -1.16
VARS-222ENST00000470953 RALYQ9UKM9 306 aaKnown RBP7.8□□□□□ -1.16
VARS-222ENST00000470953 MGAMO43451 1857 aa7.8□□□□□ -1.16
VARS-222ENST00000470953 ANKRD36CQ5JPF3 1778 aa7.79□□□□□ -1.16
VARS-222ENST00000470953 MAST2Q6P0Q8 1798 aa7.79□□□□□ -1.16
VARS-222ENST00000470953 DNAH14Q0VDD8 3507 aa7.79□□□□□ -1.16
VARS-222ENST00000470953 MED19A0JLT2 244 aaPredicted RBP7.79□□□□□ -1.16
VARS-222ENST00000470953 PPP1R12BO60237 982 aaPredicted RBP7.79□□□□□ -1.16
VARS-222ENST00000470953 USP2O75604 605 aaPredicted RBP7.79□□□□□ -1.16
VARS-222ENST00000470953 DNAJB2P25686 324 aa7.79□□□□□ -1.16
VARS-222ENST00000470953 DCTN1Q14203 1278 aa7.79□□□□□ -1.16
VARS-222ENST00000470953 ACAP1Q15027 740 aa7.79□□□□□ -1.16
VARS-222ENST00000470953 APOBEC3FQ8IUX4 373 aaKnown RBP7.79□□□□□ -1.16
VARS-222ENST00000470953 HELBQ8NG08 1087 aaPredicted RBP7.79□□□□□ -1.16
VARS-222ENST00000470953 KNSTRNQ9Y448 316 aa7.79□□□□□ -1.16
VARS-222ENST00000470953 ANKRD11Q6UB99 2663 aaPredicted RBP7.79□□□□□ -1.16
VARS-222ENST00000470953 UNCXA6NJT0 531 aa7.78□□□□□ -1.16
VARS-222ENST00000470953 BTBD19C9JJ37 291 aa7.78□□□□□ -1.16
VARS-222ENST00000470953 DIAPH1O60610 1272 aaKnown RBP7.78□□□□□ -1.16
VARS-222ENST00000470953 WDHD1O75717 1129 aaPredicted RBP7.78□□□□□ -1.16
VARS-222ENST00000470953 COL6A1P12109 1028 aa7.78□□□□□ -1.16
VARS-222ENST00000470953 FLT3LGP49771 235 aa7.78□□□□□ -1.16
VARS-222ENST00000470953 GTF2A2P52657 109 aa7.78□□□□□ -1.16
VARS-222ENST00000470953 PARP10Q53GL7 1025 aa7.78□□□□□ -1.16
VARS-222ENST00000470953 ANKRD13AQ8IZ07 590 aa7.78□□□□□ -1.16
VARS-222ENST00000470953 DEFB129Q9H1M3 183 aa7.78□□□□□ -1.16
VARS-222ENST00000470953 COL1A1P02452 1464 aaPredicted RBP7.77□□□□□ -1.17
VARS-222ENST00000470953 TLL1O43897 1013 aa7.77□□□□□ -1.17
VARS-222ENST00000470953 U2AF1L5P0DN76 240 aaPredicted RBP7.77□□□□□ -1.17
VARS-222ENST00000470953 IGFBP4P22692 258 aa7.77□□□□□ -1.17
VARS-222ENST00000470953 IREB2P48200 963 aaKnown RBP7.77□□□□□ -1.17
VARS-222ENST00000470953 U2AF1Q01081 240 aaKnown RBP eCLIP7.77□□□□□ -1.17
VARS-222ENST00000470953 AAK1Q2M2I8 961 aa7.77□□□□□ -1.17
VARS-222ENST00000470953 LRP10Q7Z4F1 713 aa7.77□□□□□ -1.17
VARS-222ENST00000470953 PRSS33Q8NF86 280 aa7.77□□□□□ -1.17
VARS-222ENST00000470953 PXYLP1Q8TE99 480 aa7.77□□□□□ -1.17
VARS-222ENST00000470953 EYA3Q99504 573 aa7.77□□□□□ -1.17
VARS-222ENST00000470953 THUMPD2Q9BTF0 503 aaKnown RBP7.77□□□□□ -1.17
VARS-222ENST00000470953 ZC3H12CQ9C0D7 883 aaKnown RBP7.77□□□□□ -1.17
VARS-222ENST00000470953 DACH1Q9UI36 760 aa7.77□□□□□ -1.17
VARS-222ENST00000470953 TPRP12270 2363 aaKnown RBP7.77□□□□□ -1.17
VARS-222ENST00000470953 DMDP11532 3685 aa7.77□□□□□ -1.17
VARS-222ENST00000470953 CHD9Q3L8U1 2897 aa7.77□□□□□ -1.17
VARS-222ENST00000470953 ID4P47928 161 aa7.76□□□□□ -1.17
VARS-222ENST00000470953 FCGRTP55899 365 aa7.76□□□□□ -1.17
VARS-222ENST00000470953 CSPP1Q1MSJ5 1256 aa7.76□□□□□ -1.17
VARS-222ENST00000470953 NBPF12Q5TAG4 269 aaPredicted RBP7.76□□□□□ -1.17
VARS-222ENST00000470953 NLRP10Q86W26 655 aa7.76□□□□□ -1.17
VARS-222ENST00000470953 TIFAQ96CG3 184 aa7.76□□□□□ -1.17
VARS-222ENST00000470953 TSPYL2Q9H2G4 693 aaPredicted RBP7.76□□□□□ -1.17
VARS-222ENST00000470953 TAOK2Q9UL54 1235 aa7.76□□□□□ -1.17
VARS-222ENST00000470953 OGDHLQ9ULD0 1010 aa7.76□□□□□ -1.17
VARS-222ENST00000470953 NCOR2Q9Y618 2525 aa7.76□□□□□ -1.17
VARS-222ENST00000470953 FASNP49327 2511 aaKnown RBP7.75□□□□□ -1.17
VARS-222ENST00000470953 USP17L3A6NCW0 530 aa7.75□□□□□ -1.17
VARS-222ENST00000470953 USP17L4A6NCW7 530 aa7.75□□□□□ -1.17
VARS-222ENST00000470953 G3V3G9 751 aa7.75□□□□□ -1.17
VARS-222ENST00000470953 U2SURPO15042 1029 aaKnown RBP7.75□□□□□ -1.17
VARS-222ENST00000470953 ANXA1P04083 346 aa7.75□□□□□ -1.17
VARS-222ENST00000470953 CNGB1Q14028 1251 aaPredicted RBP7.75□□□□□ -1.17
VARS-222ENST00000470953 PROSER3Q2NL68 480 aa7.75□□□□□ -1.17
VARS-222ENST00000470953 DCAF8Q5TAQ9 597 aa7.75□□□□□ -1.17
VARS-222ENST00000470953 USP17L1Q7RTZ2 530 aa7.75□□□□□ -1.17
VARS-222ENST00000470953 TMC4Q7Z404 712 aa7.75□□□□□ -1.17
VARS-222ENST00000470953 MICALL1Q8N3F8 863 aa7.75□□□□□ -1.17
VARS-222ENST00000470953 ZCCHC17Q9NP64 241 aaKnown RBP7.75□□□□□ -1.17
VARS-222ENST00000470953 TRMT112Q9UI30 125 aaKnown RBP7.75□□□□□ -1.17
VARS-222ENST00000470953 MYO9BQ13459 2157 aa7.74□□□□□ -1.17
VARS-222ENST00000470953 UFL1O94874 794 aa7.74□□□□□ -1.17
VARS-222ENST00000470953 HOXB3P14651 431 aaPredicted RBP7.74□□□□□ -1.17
VARS-222ENST00000470953 TRIM32Q13049 653 aa7.74□□□□□ -1.17
VARS-222ENST00000470953 PDIA6Q15084 440 aa7.74□□□□□ -1.17
VARS-222ENST00000470953 AMER1Q5JTC6 1135 aaPredicted RBP7.74□□□□□ -1.17
VARS-222ENST00000470953 DACT2Q5SW24 774 aa7.74□□□□□ -1.17
VARS-222ENST00000470953 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.74□□□□□ -1.17
VARS-222ENST00000470953 BADQ92934 168 aa7.74□□□□□ -1.17
VARS-222ENST00000470953 RNPC3Q96LT9 517 aaKnown RBP7.74□□□□□ -1.17
VARS-222ENST00000470953 FAM86C1Q9NVL1 165 aa7.74□□□□□ -1.17
VARS-222ENST00000470953 PODXL2Q9NZ53 605 aa7.74□□□□□ -1.17
VARS-222ENST00000470953 PCDHAC2Q9Y5I4 1007 aa7.74□□□□□ -1.17
VARS-222ENST00000470953 PTPRZ1P23471 2315 aaPredicted RBP7.74□□□□□ -1.17
VARS-222ENST00000470953 GPR179Q6PRD1 2367 aa7.73□□□□□ -1.17
VARS-222ENST00000470953 ERC2O15083 957 aa7.73□□□□□ -1.17
VARS-222ENST00000470953 PRKAR2BP31323 418 aa7.73□□□□□ -1.17
VARS-222ENST00000470953 IRF5Q13568 498 aa7.73□□□□□ -1.17
VARS-222ENST00000470953 VGLL4Q14135 290 aa7.73□□□□□ -1.17
VARS-222ENST00000470953 ZBED3Q96IU2 234 aaPredicted RBP7.73□□□□□ -1.17
VARS-222ENST00000470953 SEC31BQ9NQW1 1179 aa7.73□□□□□ -1.17
VARS-222ENST00000470953 ACACBO00763 2458 aa7.73□□□□□ -1.17
VARS-222ENST00000470953 AOX1Q06278 1338 aa7.73□□□□□ -1.17
VARS-222ENST00000470953 SH3TC1Q8TE82 1336 aa7.73□□□□□ -1.17
VARS-222ENST00000470953 CHD7Q9P2D1 2997 aa7.72□□□□□ -1.17
VARS-222ENST00000470953 CETPP11597 493 aa7.72□□□□□ -1.17
VARS-222ENST00000470953 PBX2P40425 430 aa7.72□□□□□ -1.17
VARS-222ENST00000470953 EIF4A1P60842 406 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms