RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 CERKQ8TCT0 537 aa13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 HAUS7Q99871 368 aa13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 WDR70Q9NW82 654 aa13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 NEDD4P46934 1319 aa13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 PALLDQ8WX93 1383 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 KIF1CO43896 1103 aaKnown RBP13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 NDUFA8P51970 172 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 FANCCQ00597 558 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 STK38Q15208 465 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 SF3A1Q15459 793 aaKnown RBP13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 TNNI3KQ59H18 835 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 STOX1Q6ZVD7 989 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 GPR161Q8N6U8 529 aaKnown RBP13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 USHBP1Q8N6Y0 703 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 LRRN4CLQ8ND94 238 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 SIL1Q9H173 461 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 HELLSQ9NRZ9 838 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 DBNLQ9UJU6 430 aaKnown RBP13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 FPGT-TNNI3KV9GXZ4 949 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 A0A1B0GVL5 298 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 EVCP57679 992 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 RAD51AP2Q09MP3 1159 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 APOBRQ0VD83 1088 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 NEXNQ0ZGT2 675 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 PROSER3Q2NL68 480 aa13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 ZNF530Q6P9A1 599 aaPredicted RBP13.05□□□□□ -0.32
SRGAP3-204ENST00000470951 A0A087WWV3 80 aa13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 PDIA3P30101 505 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 SETQ01105 290 aaPredicted RBP13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 IRF5Q13568 498 aa13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 JAKMIP3Q5VZ66 844 aa13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 ABTB2Q8N961 1025 aa13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 KBTBD3Q8NAB2 608 aa13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 RASSF4Q9H2L5 321 aa13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 SPTLC2O15270 562 aa13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 ARHGAP6O43182 974 aa13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 ATF3P18847 181 aa13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 CMA1P23946 247 aa13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 FBXW7Q969H0 707 aa13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 EDC3Q96F86 508 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 LRRC2Q9BYS8 371 aa13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 PARP3Q9Y6F1 533 aa13.04□□□□□ -0.32
SRGAP3-204ENST00000470951 NFAT5O94916 1531 aa13.03□□□□□ -0.32
SRGAP3-204ENST00000470951 SPEF2Q9C093 1822 aa13.03□□□□□ -0.32
SRGAP3-204ENST00000470951 URI1O94763 535 aaPredicted RBP13.03□□□□□ -0.32
SRGAP3-204ENST00000470951 ZNF202O95125 648 aa13.03□□□□□ -0.32
SRGAP3-204ENST00000470951 NBPF6Q5VWK0 638 aa13.03□□□□□ -0.32
SRGAP3-204ENST00000470951 REXO1L1PQ8IX06 675 aa13.03□□□□□ -0.32
SRGAP3-204ENST00000470951 NBPF4Q96M43 638 aa13.03□□□□□ -0.32
SRGAP3-204ENST00000470951 PSD3Q9NYI0 1048 aa13.03□□□□□ -0.32
SRGAP3-204ENST00000470951 IGKV5-2P06315 115 aa13.02□□□□□ -0.32
SRGAP3-204ENST00000470951 C1orf141Q5JVX7 400 aa13.02□□□□□ -0.32
SRGAP3-204ENST00000470951 CC2D1AQ6P1N0 951 aaPredicted RBP13.02□□□□□ -0.32
SRGAP3-204ENST00000470951 ERCC4Q92889 916 aaPredicted RBP13.02□□□□□ -0.32
SRGAP3-204ENST00000470951 CWC15Q9P013 229 aaKnown RBP13.02□□□□□ -0.32
SRGAP3-204ENST00000470951 TUBE1Q9UJT0 475 aa13.02□□□□□ -0.32
SRGAP3-204ENST00000470951 RGPD2P0DJD1 1756 aa13.02□□□□□ -0.32
SRGAP3-204ENST00000470951 ADAMTS7Q9UKP4 1686 aa13.02□□□□□ -0.33
SRGAP3-204ENST00000470951 NEURL1BA8MQ27 555 aa13.02□□□□□ -0.33
SRGAP3-204ENST00000470951 TBC1D8O95759 1140 aa13.02□□□□□ -0.33
SRGAP3-204ENST00000470951 UBASH3AP57075 661 aa13.02□□□□□ -0.33
SRGAP3-204ENST00000470951 CCT2P78371 535 aaKnown RBP13.02□□□□□ -0.33
SRGAP3-204ENST00000470951 SEMA3FQ13275 785 aa13.02□□□□□ -0.33
SRGAP3-204ENST00000470951 GCKRQ14397 625 aa13.02□□□□□ -0.33
SRGAP3-204ENST00000470951 CCDC129Q6ZRS4 1044 aa13.02□□□□□ -0.33
SRGAP3-204ENST00000470951 VSTM4Q8IW00 320 aa13.02□□□□□ -0.33
SRGAP3-204ENST00000470951 CARD6Q9BX69 1037 aa13.02□□□□□ -0.33
SRGAP3-204ENST00000470951 ARFGAP3Q9NP61 516 aa13.02□□□□□ -0.33
SRGAP3-204ENST00000470951 E7EWF7 191 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 GOLIM4O00461 696 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 FOSBP53539 338 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 MAP3K9P80192 1104 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 MYL5Q02045 173 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 GORABQ5T7V8 394 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 MYSM1Q5VVJ2 828 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 RABGGTAQ92696 567 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 AK7Q96M32 723 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 FDPSP14324 419 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 LMOD1P29536 600 aaPredicted RBP13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 RFX5P48382 616 aaPredicted RBP13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 SMC1AQ14683 1233 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 NBPF9Q3BBW0 867 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 MPRIPQ6WCQ1 1025 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 SYNE3Q6ZMZ3 975 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 RIC3Q7Z5B4 369 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 FBXO18Q8NFZ0 1043 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 EXOC4Q96A65 974 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 C8orf76Q96K31 380 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 SEC62Q99442 399 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 HSD3B7Q9H2F3 369 aa13.01□□□□□ -0.33
SRGAP3-204ENST00000470951 TTC36A6NLP5 189 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 POLR3GO15318 223 aaPredicted RBP13□□□□□ -0.33
SRGAP3-204ENST00000470951 TOP1P11387 765 aaKnown RBP13□□□□□ -0.33
SRGAP3-204ENST00000470951 OAS2P29728 719 aaKnown RBP13□□□□□ -0.33
SRGAP3-204ENST00000470951 TFCP2Q12800 502 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 RABL6Q3YEC7 729 aaPredicted RBP13□□□□□ -0.33
SRGAP3-204ENST00000470951 RSRC2Q7L4I2 434 aaKnown RBP13□□□□□ -0.33
SRGAP3-204ENST00000470951 CADPS2Q86UW7 1296 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 KLHDC4Q8TBB5 520 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms