RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 DDX54Q8TDD1 881 aaKnown RBP7.3□□□□□ -1.24
COL9A1-206ENST00000470652 FOXD4L4Q8WXT5 416 aaPredicted RBP7.3□□□□□ -1.24
COL9A1-206ENST00000470652 BCO2Q9BYV7 579 aa7.3□□□□□ -1.24
COL9A1-206ENST00000470652 ZNF576Q9H609 170 aa7.3□□□□□ -1.24
COL9A1-206ENST00000470652 ZBTB7CA1YPR0 619 aa7.29□□□□□ -1.24
COL9A1-206ENST00000470652 WISP1O95388 367 aa7.29□□□□□ -1.24
COL9A1-206ENST00000470652 P4HBP07237 508 aaKnown RBP7.29□□□□□ -1.24
COL9A1-206ENST00000470652 XRCC5P13010 732 aaKnown RBP7.29□□□□□ -1.24
COL9A1-206ENST00000470652 NLRP12P59046 1061 aa7.29□□□□□ -1.24
COL9A1-206ENST00000470652 FGD1P98174 961 aa7.29□□□□□ -1.24
COL9A1-206ENST00000470652 GSTM4Q03013 218 aa7.29□□□□□ -1.24
COL9A1-206ENST00000470652 ZNF423Q2M1K9 1284 aa7.29□□□□□ -1.24
COL9A1-206ENST00000470652 CCDC27Q2M243 656 aa7.29□□□□□ -1.24
COL9A1-206ENST00000470652 RPS26P11Q5JNZ5 115 aaPredicted RBP7.29□□□□□ -1.24
COL9A1-206ENST00000470652 HGSNATQ68CP4 663 aa7.29□□□□□ -1.24
COL9A1-206ENST00000470652 SRCIN1Q9C0H9 1055 aa7.29□□□□□ -1.24
COL9A1-206ENST00000470652 GIPC1O14908 333 aa7.28□□□□□ -1.24
COL9A1-206ENST00000470652 B3GALT4O96024 378 aa7.28□□□□□ -1.24
COL9A1-206ENST00000470652 LDHBP07195 334 aaKnown RBP7.28□□□□□ -1.24
COL9A1-206ENST00000470652 NXPE4Q6UWF7 544 aa7.28□□□□□ -1.24
COL9A1-206ENST00000470652 DTHD1Q6ZMT9 781 aa7.28□□□□□ -1.24
COL9A1-206ENST00000470652 Q6ZS46 218 aa7.28□□□□□ -1.24
COL9A1-206ENST00000470652 KIAA1211Q6ZU35 1233 aa7.28□□□□□ -1.24
COL9A1-206ENST00000470652 WWC3Q9ULE0 1092 aa7.28□□□□□ -1.24
COL9A1-206ENST00000470652 SPG7Q9UQ90 795 aa7.28□□□□□ -1.24
COL9A1-206ENST00000470652 CYP11A1P05108 521 aa7.27□□□□□ -1.25
COL9A1-206ENST00000470652 GLB1P16278 677 aa7.27□□□□□ -1.25
COL9A1-206ENST00000470652 ERCC3P19447 782 aa7.27□□□□□ -1.25
COL9A1-206ENST00000470652 TXKP42681 527 aa7.27□□□□□ -1.25
COL9A1-206ENST00000470652 CD97P48960 835 aa7.27□□□□□ -1.25
COL9A1-206ENST00000470652 FCGRTP55899 365 aa7.27□□□□□ -1.25
COL9A1-206ENST00000470652 DNAJC14Q6Y2X3 702 aaPredicted RBP7.27□□□□□ -1.25
COL9A1-206ENST00000470652 AGGF1Q8N302 714 aaeCLIP7.27□□□□□ -1.25
COL9A1-206ENST00000470652 UBASH3BQ8TF42 649 aa7.27□□□□□ -1.25
COL9A1-206ENST00000470652 FRMD6Q96NE9 622 aa7.27□□□□□ -1.25
COL9A1-206ENST00000470652 CEP41Q9BYV8 373 aa7.27□□□□□ -1.25
COL9A1-206ENST00000470652 MEGF11A6BM72 1044 aa7.26□□□□□ -1.25
COL9A1-206ENST00000470652 IRAK1P51617 712 aa7.26□□□□□ -1.25
COL9A1-206ENST00000470652 EAPPQ56P03 285 aaPredicted RBP7.26□□□□□ -1.25
COL9A1-206ENST00000470652 SETDB2Q96T68 719 aa7.26□□□□□ -1.25
COL9A1-206ENST00000470652 RUSC1Q9BVN2 902 aa7.26□□□□□ -1.25
COL9A1-206ENST00000470652 RNF208Q9H0X6 261 aa7.26□□□□□ -1.25
COL9A1-206ENST00000470652 ABCC9O60706 1549 aa7.26□□□□□ -1.25
COL9A1-206ENST00000470652 PRPF40AO75400 957 aaKnown RBP7.25□□□□□ -1.25
COL9A1-206ENST00000470652 MED26O95402 600 aa7.25□□□□□ -1.25
COL9A1-206ENST00000470652 USP26Q9BXU7 913 aa7.25□□□□□ -1.25
COL9A1-206ENST00000470652 RAXQ9Y2V3 346 aa7.25□□□□□ -1.25
COL9A1-206ENST00000470652 LOC100289279A0A1B0GTE1 492 aa7.24□□□□□ -1.25
COL9A1-206ENST00000470652 GSTT1P30711 240 aa7.24□□□□□ -1.25
COL9A1-206ENST00000470652 EXOSC6Q5RKV6 272 aaKnown RBP7.24□□□□□ -1.25
COL9A1-206ENST00000470652 HP1BP3Q5SSJ5 553 aaPredicted RBP7.24□□□□□ -1.25
COL9A1-206ENST00000470652 ANKRD34AQ69YU3 496 aa7.24□□□□□ -1.25
COL9A1-206ENST00000470652 NPAS4Q8IUM7 802 aa7.24□□□□□ -1.25
COL9A1-206ENST00000470652 OSBPL7Q9BZF2 842 aa7.24□□□□□ -1.25
COL9A1-206ENST00000470652 NRSN2Q9GZP1 204 aa7.24□□□□□ -1.25
COL9A1-206ENST00000470652 STOML1Q9UBI4 398 aa7.24□□□□□ -1.25
COL9A1-206ENST00000470652 AKAP2Q9Y2D5 859 aa7.24□□□□□ -1.25
COL9A1-206ENST00000470652 KRTAP4-8A0A0G2JLE6 195 aa7.23□□□□□ -1.25
COL9A1-206ENST00000470652 COBLO75128 1261 aa7.23□□□□□ -1.25
COL9A1-206ENST00000470652 IGLV1-40P01703 118 aa7.23□□□□□ -1.25
COL9A1-206ENST00000470652 PPP2R3AQ06190 1150 aa7.23□□□□□ -1.25
COL9A1-206ENST00000470652 AP3B2Q13367 1082 aa7.23□□□□□ -1.25
COL9A1-206ENST00000470652 POU4F3Q15319 338 aa7.23□□□□□ -1.25
COL9A1-206ENST00000470652 NUTM2GQ5VZR2 741 aa7.23□□□□□ -1.25
COL9A1-206ENST00000470652 FDX2Q6P4F2 183 aa7.23□□□□□ -1.25
COL9A1-206ENST00000470652 UBL7Q96S82 380 aaPredicted RBP7.23□□□□□ -1.25
COL9A1-206ENST00000470652 CORO1BQ9BR76 489 aa7.23□□□□□ -1.25
COL9A1-206ENST00000470652 TMPRSS13Q9BYE2 586 aa7.23□□□□□ -1.25
COL9A1-206ENST00000470652 CYP4F12Q9HCS2 524 aa7.23□□□□□ -1.25
COL9A1-206ENST00000470652 GSC2O15499 205 aa7.22□□□□□ -1.25
COL9A1-206ENST00000470652 SART1O43290 800 aaKnown RBP7.22□□□□□ -1.25
COL9A1-206ENST00000470652 TGFB1P01137 390 aa7.22□□□□□ -1.25
COL9A1-206ENST00000470652 TAL1P17542 331 aaPredicted RBP7.22□□□□□ -1.25
COL9A1-206ENST00000470652 MAOBP27338 520 aa7.22□□□□□ -1.25
COL9A1-206ENST00000470652 GNA15P30679 374 aa7.22□□□□□ -1.25
COL9A1-206ENST00000470652 FAAP100Q0VG06 881 aa7.22□□□□□ -1.25
COL9A1-206ENST00000470652 UVSSAQ2YD98 709 aa7.22□□□□□ -1.25
COL9A1-206ENST00000470652 FMNL2Q96PY5 1086 aa7.22□□□□□ -1.25
COL9A1-206ENST00000470652 TRIM56Q9BRZ2 755 aaKnown RBP7.22□□□□□ -1.25
COL9A1-206ENST00000470652 C12orf49Q9H741 205 aa7.22□□□□□ -1.25
COL9A1-206ENST00000470652 SUGCTQ9HAC7 445 aa7.22□□□□□ -1.25
COL9A1-206ENST00000470652 TMEM39AQ9NV64 488 aa7.22□□□□□ -1.25
COL9A1-206ENST00000470652 FAM8A1Q9UBU6 413 aa7.22□□□□□ -1.25
COL9A1-206ENST00000470652 OAS3Q9Y6K5 1087 aaKnown RBP7.22□□□□□ -1.25
COL9A1-206ENST00000470652 DLGAP3O95886 979 aa7.21□□□□□ -1.26
COL9A1-206ENST00000470652 ZNF157P51786 506 aaPredicted RBP7.21□□□□□ -1.26
COL9A1-206ENST00000470652 GP2P55259 537 aaKnown RBP7.21□□□□□ -1.26
COL9A1-206ENST00000470652 SMG8Q8ND04 991 aaKnown RBP7.21□□□□□ -1.26
COL9A1-206ENST00000470652 C3orf58Q8NDZ4 430 aa7.21□□□□□ -1.26
COL9A1-206ENST00000470652 FAM46AQ96IP4 442 aaKnown RBP7.21□□□□□ -1.26
COL9A1-206ENST00000470652 DUSP9Q99956 384 aaKnown RBP7.21□□□□□ -1.26
COL9A1-206ENST00000470652 GPN3Q9UHW5 284 aaPredicted RBP7.21□□□□□ -1.26
COL9A1-206ENST00000470652 PPM1HQ9ULR3 514 aa7.21□□□□□ -1.26
COL9A1-206ENST00000470652 DHX15O43143 795 aaKnown RBP7.2□□□□□ -1.26
COL9A1-206ENST00000470652 YBX3P16989 372 aaKnown RBP eCLIP7.2□□□□□ -1.26
COL9A1-206ENST00000470652 EIF4BP23588 611 aaKnown RBP7.2□□□□□ -1.26
COL9A1-206ENST00000470652 C12orf50Q8NA57 414 aaPredicted RBP7.2□□□□□ -1.26
COL9A1-206ENST00000470652 CEP44Q9C0F1 390 aa7.2□□□□□ -1.26
COL9A1-206ENST00000470652 TMCO4Q5TGY1 634 aa7.19□□□□□ -1.26
COL9A1-206ENST00000470652 FBXO33Q7Z6M2 555 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms