RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 HPS5Q9UPZ3 1129 aa15.24■□□□□ 0.03
SFXN3-205ENST00000470252 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.24■□□□□ 0.03
SFXN3-205ENST00000470252 EYA2O00167 538 aa15.23■□□□□ 0.03
SFXN3-205ENST00000470252 ATP1A3P13637 1013 aa15.23■□□□□ 0.03
SFXN3-205ENST00000470252 H2AFXP16104 143 aaPredicted RBP15.23■□□□□ 0.03
SFXN3-205ENST00000470252 CMA1P23946 247 aa15.23■□□□□ 0.03
SFXN3-205ENST00000470252 MARCKSP29966 332 aaPredicted RBP15.23■□□□□ 0.03
SFXN3-205ENST00000470252 AXDND1Q5T1B0 1012 aaPredicted RBP15.23■□□□□ 0.03
SFXN3-205ENST00000470252 CWC25Q9NXE8 425 aaPredicted RBP15.23■□□□□ 0.03
SFXN3-205ENST00000470252 MROH7-TTC4A0A0A0MT08 1334 aa15.23■□□□□ 0.03
SFXN3-205ENST00000470252 DCAF5Q96JK2 942 aa15.23■□□□□ 0.03
SFXN3-205ENST00000470252 C4AP0C0L4 1744 aa15.23■□□□□ 0.03
SFXN3-205ENST00000470252 C4BP0C0L5 1744 aa15.23■□□□□ 0.03
SFXN3-205ENST00000470252 TJP1Q07157 1748 aa15.23■□□□□ 0.03
SFXN3-205ENST00000470252 IKBKBO14920 756 aa15.22■□□□□ 0.03
SFXN3-205ENST00000470252 TUBB4AP04350 444 aa15.22■□□□□ 0.03
SFXN3-205ENST00000470252 KIF23Q02241 960 aaPredicted RBP15.22■□□□□ 0.03
SFXN3-205ENST00000470252 BMS1Q14692 1282 aaKnown RBP15.22■□□□□ 0.03
SFXN3-205ENST00000470252 MB21D2Q8IYB1 491 aaPredicted RBP15.22■□□□□ 0.03
SFXN3-205ENST00000470252 DNAI1Q9UI46 699 aa15.22■□□□□ 0.03
SFXN3-205ENST00000470252 DDX60Q8IY21 1712 aaKnown RBP15.22■□□□□ 0.03
SFXN3-205ENST00000470252 MYH7P12883 1935 aa15.22■□□□□ 0.03
SFXN3-205ENST00000470252 FOXP2O15409 715 aa15.22■□□□□ 0.03
SFXN3-205ENST00000470252 WDHD1O75717 1129 aaPredicted RBP15.22■□□□□ 0.03
SFXN3-205ENST00000470252 FGAP02671 866 aa15.22■□□□□ 0.03
SFXN3-205ENST00000470252 CLCN6P51797 869 aa15.22■□□□□ 0.03
SFXN3-205ENST00000470252 CABP4P57796 275 aa15.22■□□□□ 0.03
SFXN3-205ENST00000470252 ARHGAP29Q52LW3 1261 aa15.22■□□□□ 0.03
SFXN3-205ENST00000470252 PUS3Q9BZE2 481 aaKnown RBP15.22■□□□□ 0.03
SFXN3-205ENST00000470252 TAOK2Q9UL54 1235 aa15.22■□□□□ 0.03
SFXN3-205ENST00000470252 CCP110O43303 1012 aa15.21■□□□□ 0.03
SFXN3-205ENST00000470252 SERPINC1P01008 464 aa15.21■□□□□ 0.03
SFXN3-205ENST00000470252 CSB-PGBD3P0DP91 1061 aa15.21■□□□□ 0.03
SFXN3-205ENST00000470252 SYKP43405 635 aa15.21■□□□□ 0.03
SFXN3-205ENST00000470252 ETF1P62495 437 aaKnown RBP15.21■□□□□ 0.03
SFXN3-205ENST00000470252 HSP90AB3PQ58FF7 597 aa15.21■□□□□ 0.03
SFXN3-205ENST00000470252 RALYLQ86SE5 291 aaKnown RBP15.21■□□□□ 0.03
SFXN3-205ENST00000470252 NCOA7Q8NI08 942 aa15.21■□□□□ 0.03
SFXN3-205ENST00000470252 NUP188Q5SRE5 1749 aa15.21■□□□□ 0.03
SFXN3-205ENST00000470252 CYP27B1O15528 508 aa15.21■□□□□ 0.03
SFXN3-205ENST00000470252 UBASH3AP57075 661 aa15.21■□□□□ 0.03
SFXN3-205ENST00000470252 ANTXR2P58335 489 aa15.21■□□□□ 0.03
SFXN3-205ENST00000470252 LRRFIP1Q32MZ4 808 aaKnown RBP15.21■□□□□ 0.03
SFXN3-205ENST00000470252 TTC39AQ5SRH9 613 aa15.21■□□□□ 0.03
SFXN3-205ENST00000470252 TTLL7Q6ZT98 887 aa15.21■□□□□ 0.03
SFXN3-205ENST00000470252 HSD3B7Q9H2F3 369 aa15.21■□□□□ 0.03
SFXN3-205ENST00000470252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.21■□□□□ 0.03
SFXN3-205ENST00000470252 NBPF26B4DH59 902 aa15.2■□□□□ 0.02
SFXN3-205ENST00000470252 SLC39A14Q15043 492 aa15.2■□□□□ 0.02
SFXN3-205ENST00000470252 NBPF14Q5TI25 921 aa15.2■□□□□ 0.02
SFXN3-205ENST00000470252 NBPF10Q6P3W6 841 aaKnown RBP15.2■□□□□ 0.02
SFXN3-205ENST00000470252 NBPF15Q8N660 670 aa15.2■□□□□ 0.02
SFXN3-205ENST00000470252 DPF2Q92785 391 aa15.2■□□□□ 0.02
SFXN3-205ENST00000470252 CFAP100Q494V2 611 aa15.2■□□□□ 0.02
SFXN3-205ENST00000470252 CCDC158Q5M9N0 1113 aa15.2■□□□□ 0.02
SFXN3-205ENST00000470252 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.2■□□□□ 0.02
SFXN3-205ENST00000470252 CEP126Q9P2H0 1117 aa15.2■□□□□ 0.02
SFXN3-205ENST00000470252 FHOD1Q9Y613 1164 aa15.2■□□□□ 0.02
SFXN3-205ENST00000470252 PHLPP2Q6ZVD8 1323 aa15.2■□□□□ 0.02
SFXN3-205ENST00000470252 CBFA2T2O43439 604 aa15.19■□□□□ 0.02
SFXN3-205ENST00000470252 CIAO1O76071 339 aa15.19■□□□□ 0.02
SFXN3-205ENST00000470252 ADORA1P30542 326 aa15.19■□□□□ 0.02
SFXN3-205ENST00000470252 LTBP4Q8N2S1 1624 aa15.19■□□□□ 0.02
SFXN3-205ENST00000470252 TIGD1Q96MW7 591 aa15.19■□□□□ 0.02
SFXN3-205ENST00000470252 AIFM3Q96NN9 605 aa15.19■□□□□ 0.02
SFXN3-205ENST00000470252 STRCP1A6NGW2 1772 aa15.19■□□□□ 0.02
SFXN3-205ENST00000470252 GLI3P10071 1580 aa15.19■□□□□ 0.02
SFXN3-205ENST00000470252 ZFYP08048 801 aaPredicted RBP15.19■□□□□ 0.02
SFXN3-205ENST00000470252 MYL5Q02045 173 aa15.19■□□□□ 0.02
SFXN3-205ENST00000470252 PNOCQ13519 176 aa15.19■□□□□ 0.02
SFXN3-205ENST00000470252 MNS1Q8NEH6 495 aa15.19■□□□□ 0.02
SFXN3-205ENST00000470252 UBXN4Q92575 508 aa15.19■□□□□ 0.02
SFXN3-205ENST00000470252 UTP14AQ9BVJ6 771 aaKnown RBP15.19■□□□□ 0.02
SFXN3-205ENST00000470252 ZBTB3Q9H5J0 574 aa15.19■□□□□ 0.02
SFXN3-205ENST00000470252 TUBE1Q9UJT0 475 aa15.19■□□□□ 0.02
SFXN3-205ENST00000470252 CCDC66A2RUB6 948 aa15.18■□□□□ 0.02
SFXN3-205ENST00000470252 ERICH4A6NGS2 130 aa15.18■□□□□ 0.02
SFXN3-205ENST00000470252 ZNF213O14771 459 aa15.18■□□□□ 0.02
SFXN3-205ENST00000470252 URI1O94763 535 aaPredicted RBP15.18■□□□□ 0.02
SFXN3-205ENST00000470252 GOLGA8FQ08AF8 430 aa15.18■□□□□ 0.02
SFXN3-205ENST00000470252 GOLGA8DPQ0D2H9 430 aa15.18■□□□□ 0.02
SFXN3-205ENST00000470252 NOL10Q9BSC4 688 aaKnown RBP15.18■□□□□ 0.02
SFXN3-205ENST00000470252 PUS7LQ9H0K6 701 aaKnown RBP15.18■□□□□ 0.02
SFXN3-205ENST00000470252 ECM29Q5VYK3 1845 aa15.18■□□□□ 0.02
SFXN3-205ENST00000470252 PNMA6AP0CW24 399 aaPredicted RBP15.18■□□□□ 0.02
SFXN3-205ENST00000470252 GNL2Q13823 731 aaKnown RBP15.18■□□□□ 0.02
SFXN3-205ENST00000470252 PTPN21Q16825 1174 aa15.18■□□□□ 0.02
SFXN3-205ENST00000470252 TRIM65Q6PJ69 517 aa15.18■□□□□ 0.02
SFXN3-205ENST00000470252 XAGE2Q96GT9 111 aa15.18■□□□□ 0.02
SFXN3-205ENST00000470252 ALG1Q9BT22 464 aa15.18■□□□□ 0.02
SFXN3-205ENST00000470252 TMEM94Q12767 1356 aa15.18■□□□□ 0.02
SFXN3-205ENST00000470252 SHC4Q6S5L8 630 aa15.17■□□□□ 0.02
SFXN3-205ENST00000470252 VPS37DQ86XT2 251 aa15.17■□□□□ 0.02
SFXN3-205ENST00000470252 CERKQ8TCT0 537 aa15.17■□□□□ 0.02
SFXN3-205ENST00000470252 APPBP2Q92624 585 aa15.17■□□□□ 0.02
SFXN3-205ENST00000470252 ARGLU1Q9NWB6 273 aaPredicted RBP15.17■□□□□ 0.02
SFXN3-205ENST00000470252 TMEM232C9JQI7 657 aa15.17■□□□□ 0.02
SFXN3-205ENST00000470252 TOP1P11387 765 aaKnown RBP15.17■□□□□ 0.02
SFXN3-205ENST00000470252 SCARF1Q14162 830 aa15.17■□□□□ 0.02
SFXN3-205ENST00000470252 OLFM4Q6UX06 510 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms