RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 ZBED3Q96IU2 234 aaPredicted RBP14.74□□□□□ -0.05
COMMD2-202ENST00000469896 ZCCHC17Q9NP64 241 aaKnown RBP14.74□□□□□ -0.05
COMMD2-202ENST00000469896 MED23Q9ULK4 1368 aa14.73□□□□□ -0.05
COMMD2-202ENST00000469896 ZNF804BA4D1E1 1349 aa14.73□□□□□ -0.05
COMMD2-202ENST00000469896 USP2O75604 605 aaPredicted RBP14.73□□□□□ -0.05
COMMD2-202ENST00000469896 PDAP1Q13442 181 aaKnown RBP14.73□□□□□ -0.05
COMMD2-202ENST00000469896 CCDC152Q4G0S7 254 aa14.73□□□□□ -0.05
COMMD2-202ENST00000469896 RTL5Q5HYW3 569 aaPredicted RBP14.73□□□□□ -0.05
COMMD2-202ENST00000469896 PDCD7Q8N8D1 485 aaKnown RBP14.73□□□□□ -0.05
COMMD2-202ENST00000469896 COA1Q9GZY4 146 aa14.73□□□□□ -0.05
COMMD2-202ENST00000469896 TIMELESSQ9UNS1 1208 aa14.73□□□□□ -0.05
COMMD2-202ENST00000469896 IRS2Q9Y4H2 1338 aa14.72□□□□□ -0.05
COMMD2-202ENST00000469896 FMNL1O95466 1100 aaPredicted RBP14.72□□□□□ -0.05
COMMD2-202ENST00000469896 TFRCP02786 760 aaKnown RBP14.72□□□□□ -0.05
COMMD2-202ENST00000469896 PSMC4P43686 418 aa14.72□□□□□ -0.05
COMMD2-202ENST00000469896 NBPF12Q5TAG4 269 aaPredicted RBP14.72□□□□□ -0.05
COMMD2-202ENST00000469896 TTLL5Q6EMB2 1281 aa14.72□□□□□ -0.05
COMMD2-202ENST00000469896 SEC31BQ9NQW1 1179 aa14.72□□□□□ -0.05
COMMD2-202ENST00000469896 COL4A1P02462 1669 aa14.71□□□□□ -0.05
COMMD2-202ENST00000469896 MYPNQ86TC9 1320 aa14.71□□□□□ -0.05
COMMD2-202ENST00000469896 POTEMA6NI47 508 aa14.71□□□□□ -0.05
COMMD2-202ENST00000469896 CETPP11597 493 aa14.71□□□□□ -0.05
COMMD2-202ENST00000469896 FAM109BQ6ICB4 259 aaPredicted RBP14.71□□□□□ -0.05
COMMD2-202ENST00000469896 ANKRD18AQ8IVF6 992 aa14.71□□□□□ -0.05
COMMD2-202ENST00000469896 SLAIN1Q8ND83 568 aa14.71□□□□□ -0.05
COMMD2-202ENST00000469896 VEZTQ9HBM0 779 aa14.71□□□□□ -0.05
COMMD2-202ENST00000469896 CSADQ9Y600 493 aa14.71□□□□□ -0.05
COMMD2-202ENST00000469896 ECM2O94769 699 aaPredicted RBP14.7□□□□□ -0.06
COMMD2-202ENST00000469896 OSBPP22059 807 aa14.7□□□□□ -0.06
COMMD2-202ENST00000469896 NECAB2Q7Z6G3 386 aa14.7□□□□□ -0.06
COMMD2-202ENST00000469896 C7orf61Q8IZ16 206 aa14.7□□□□□ -0.06
COMMD2-202ENST00000469896 PLBD2Q8NHP8 589 aa14.7□□□□□ -0.06
COMMD2-202ENST00000469896 ISCA1Q9BUE6 129 aa14.7□□□□□ -0.06
COMMD2-202ENST00000469896 UBE2OQ9C0C9 1292 aaKnown RBP14.7□□□□□ -0.06
COMMD2-202ENST00000469896 TSPYL4Q9UJ04 414 aa14.7□□□□□ -0.06
COMMD2-202ENST00000469896 ZMYND8Q9ULU4 1186 aaPredicted RBP14.7□□□□□ -0.06
COMMD2-202ENST00000469896 ATP5J2-PTCD1G3V325 749 aa14.69□□□□□ -0.06
COMMD2-202ENST00000469896 MAGEA10P43363 369 aaPredicted RBP14.69□□□□□ -0.06
COMMD2-202ENST00000469896 TNFAIP1Q13829 316 aa14.69□□□□□ -0.06
COMMD2-202ENST00000469896 CNGB1Q14028 1251 aaPredicted RBP14.69□□□□□ -0.06
COMMD2-202ENST00000469896 POTEGQ6S5H5 508 aa14.69□□□□□ -0.06
COMMD2-202ENST00000469896 MTMR14Q8NCE2 650 aa14.69□□□□□ -0.06
COMMD2-202ENST00000469896 GUCD1Q96NT3 240 aa14.69□□□□□ -0.06
COMMD2-202ENST00000469896 UNC93B1Q9H1C4 597 aa14.69□□□□□ -0.06
COMMD2-202ENST00000469896 FAM205AQ6ZU69 1335 aa14.68□□□□□ -0.06
COMMD2-202ENST00000469896 CLRN2A0PK11 232 aa14.68□□□□□ -0.06
COMMD2-202ENST00000469896 PER1O15534 1290 aaPredicted RBP14.68□□□□□ -0.06
COMMD2-202ENST00000469896 PAWRQ96IZ0 340 aaKnown RBP14.68□□□□□ -0.06
COMMD2-202ENST00000469896 MUC3AQ02505 3323 aa14.67□□□□□ -0.06
COMMD2-202ENST00000469896 SNAPC2Q13487 334 aa14.67□□□□□ -0.06
COMMD2-202ENST00000469896 VGLL4Q14135 290 aa14.67□□□□□ -0.06
COMMD2-202ENST00000469896 RASA3Q14644 834 aa14.67□□□□□ -0.06
COMMD2-202ENST00000469896 ZBTB38Q8NAP3 1195 aaPredicted RBP14.67□□□□□ -0.06
COMMD2-202ENST00000469896 DEFB118Q96PH6 123 aa14.67□□□□□ -0.06
COMMD2-202ENST00000469896 CDC5LQ99459 802 aaKnown RBP14.67□□□□□ -0.06
COMMD2-202ENST00000469896 BTBD19C9JJ37 291 aa14.66□□□□□ -0.06
COMMD2-202ENST00000469896 FCGRTP55899 365 aa14.66□□□□□ -0.06
COMMD2-202ENST00000469896 GTF2IP78347 998 aa14.66□□□□□ -0.06
COMMD2-202ENST00000469896 MAP3K9P80192 1104 aa14.66□□□□□ -0.06
COMMD2-202ENST00000469896 TRIM28Q13263 835 aaKnown RBP14.66□□□□□ -0.06
COMMD2-202ENST00000469896 C17orf99Q6UX52 265 aa14.66□□□□□ -0.06
COMMD2-202ENST00000469896 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.66□□□□□ -0.06
COMMD2-202ENST00000469896 MAFAQ8NHW3 353 aaPredicted RBP14.66□□□□□ -0.06
COMMD2-202ENST00000469896 FAM163AQ96GL9 167 aaPredicted RBP14.66□□□□□ -0.06
COMMD2-202ENST00000469896 CPA4Q9UI42 421 aa14.66□□□□□ -0.06
COMMD2-202ENST00000469896 ADGRA2Q96PE1 1338 aa14.66□□□□□ -0.06
COMMD2-202ENST00000469896 TNFRSF10AO00220 468 aa14.65□□□□□ -0.06
COMMD2-202ENST00000469896 CCT4P50991 539 aaKnown RBP14.65□□□□□ -0.06
COMMD2-202ENST00000469896 PRKCZQ05513 592 aa14.65□□□□□ -0.06
COMMD2-202ENST00000469896 ZNF697Q5TEC3 545 aa14.65□□□□□ -0.06
COMMD2-202ENST00000469896 FAM161BQ96MY7 647 aa14.65□□□□□ -0.06
COMMD2-202ENST00000469896 EYSQ5T1H1 3165 aa14.65□□□□□ -0.06
COMMD2-202ENST00000469896 SPDYE5A6NIY4 337 aa14.64□□□□□ -0.07
COMMD2-202ENST00000469896 SYN1P17600 705 aa14.64□□□□□ -0.07
COMMD2-202ENST00000469896 CTGFP29279 349 aa14.64□□□□□ -0.07
COMMD2-202ENST00000469896 GOLGA2Q08379 1002 aa14.64□□□□□ -0.07
COMMD2-202ENST00000469896 CFAP100Q494V2 611 aa14.64□□□□□ -0.07
COMMD2-202ENST00000469896 CCDC85AQ96PX6 553 aaPredicted RBP14.64□□□□□ -0.07
COMMD2-202ENST00000469896 ZSWIM8A7E2V4 1837 aa14.64□□□□□ -0.07
COMMD2-202ENST00000469896 ADCY3O60266 1144 aa14.63□□□□□ -0.07
COMMD2-202ENST00000469896 PDE8AO60658 829 aa14.63□□□□□ -0.07
COMMD2-202ENST00000469896 INHAP05111 366 aa14.63□□□□□ -0.07
COMMD2-202ENST00000469896 RBM5P52756 815 aaKnown RBP eCLIP14.63□□□□□ -0.07
COMMD2-202ENST00000469896 ERO1BQ86YB8 467 aa14.63□□□□□ -0.07
COMMD2-202ENST00000469896 ANKLE1Q8NAG6 615 aa14.63□□□□□ -0.07
COMMD2-202ENST00000469896 CRISPLD2Q9H0B8 497 aa14.63□□□□□ -0.07
COMMD2-202ENST00000469896 BSDC1Q9NW68 430 aaPredicted RBP14.63□□□□□ -0.07
COMMD2-202ENST00000469896 RAPGEFL1Q9UHV5 662 aa14.63□□□□□ -0.07
COMMD2-202ENST00000469896 MINPP1Q9UNW1 487 aa14.63□□□□□ -0.07
COMMD2-202ENST00000469896 LEMD3Q9Y2U8 911 aa14.63□□□□□ -0.07
COMMD2-202ENST00000469896 PRUNE2Q8WUY3 3088 aa14.63□□□□□ -0.07
COMMD2-202ENST00000469896 TMEM265A0A087WTH1 108 aa14.62□□□□□ -0.07
COMMD2-202ENST00000469896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.62□□□□□ -0.07
COMMD2-202ENST00000469896 PRMT6Q96LA8 375 aaPredicted RBP14.62□□□□□ -0.07
COMMD2-202ENST00000469896 NBPF3Q9H094 633 aa14.62□□□□□ -0.07
COMMD2-202ENST00000469896 PAK6Q9NQU5 681 aaPredicted RBP14.62□□□□□ -0.07
COMMD2-202ENST00000469896 BABAM1Q9NWV8 329 aa14.62□□□□□ -0.07
COMMD2-202ENST00000469896 F8W031 263 aaPredicted RBP14.61□□□□□ -0.07
COMMD2-202ENST00000469896 NFE2L2Q16236 605 aa14.61□□□□□ -0.07
COMMD2-202ENST00000469896 PXYLP1Q8TE99 480 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms