RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 HSD3B7Q9H2F3 369 aa14.02□□□□□ -0.17
VARS2-205ENST00000469358 RFX7Q2KHR2 1363 aa14.02□□□□□ -0.17
VARS2-205ENST00000469358 SLU7O95391 586 aaKnown RBP14.02□□□□□ -0.17
VARS2-205ENST00000469358 APPP05067 770 aa14.02□□□□□ -0.17
VARS2-205ENST00000469358 MICU3Q86XE3 530 aa14.02□□□□□ -0.17
VARS2-205ENST00000469358 HOMER1Q86YM7 354 aa14.02□□□□□ -0.17
VARS2-205ENST00000469358 NBPF3Q9H094 633 aa14.02□□□□□ -0.17
VARS2-205ENST00000469358 GPAA1O43292 621 aa14.01□□□□□ -0.17
VARS2-205ENST00000469358 FANCCQ00597 558 aa14.01□□□□□ -0.17
VARS2-205ENST00000469358 RALYLQ86SE5 291 aaKnown RBP14.01□□□□□ -0.17
VARS2-205ENST00000469358 ZNF397Q8NF99 534 aaPredicted RBP14.01□□□□□ -0.17
VARS2-205ENST00000469358 OSBPL5Q9H0X9 879 aaPredicted RBP14.01□□□□□ -0.17
VARS2-205ENST00000469358 SYCP1Q15431 976 aa14.01□□□□□ -0.17
VARS2-205ENST00000469358 CYB5R4Q7L1T6 521 aa14.01□□□□□ -0.17
VARS2-205ENST00000469358 DNAI1Q9UI46 699 aa14.01□□□□□ -0.17
VARS2-205ENST00000469358 A0A1W2PQ27 194 aa14□□□□□ -0.17
VARS2-205ENST00000469358 A0A1W2PQ64 194 aa14□□□□□ -0.17
VARS2-205ENST00000469358 A0A1W2PQD8 194 aa14□□□□□ -0.17
VARS2-205ENST00000469358 CCDC57Q2TAC2 916 aa14□□□□□ -0.17
VARS2-205ENST00000469358 TBC1D10CQ8IV04 446 aa14□□□□□ -0.17
VARS2-205ENST00000469358 CCDC82Q8N4S0 544 aa14□□□□□ -0.17
VARS2-205ENST00000469358 KCNG4Q8TDN1 519 aa14□□□□□ -0.17
VARS2-205ENST00000469358 ERICH4A6NGS2 130 aa14□□□□□ -0.17
VARS2-205ENST00000469358 SLFN14P0C7P3 912 aa14□□□□□ -0.17
VARS2-205ENST00000469358 CDC27P30260 824 aa14□□□□□ -0.17
VARS2-205ENST00000469358 CCDC158Q5M9N0 1113 aa14□□□□□ -0.17
VARS2-205ENST00000469358 SHC4Q6S5L8 630 aa14□□□□□ -0.17
VARS2-205ENST00000469358 POLR3EQ9NVU0 708 aa14□□□□□ -0.17
VARS2-205ENST00000469358 MORC2Q9Y6X9 1032 aaPredicted RBP14□□□□□ -0.17
VARS2-205ENST00000469358 ZNF213O14771 459 aa14□□□□□ -0.17
VARS2-205ENST00000469358 GPTP24298 496 aa14□□□□□ -0.17
VARS2-205ENST00000469358 NLRP12P59046 1061 aa14□□□□□ -0.17
VARS2-205ENST00000469358 TAF7LQ5H9L4 462 aa14□□□□□ -0.17
VARS2-205ENST00000469358 ERO1AQ96HE7 468 aa14□□□□□ -0.17
VARS2-205ENST00000469358 ALG1Q9BT22 464 aa14□□□□□ -0.17
VARS2-205ENST00000469358 B4E1Z4 1266 aa13.99□□□□□ -0.17
VARS2-205ENST00000469358 VPS37DQ86XT2 251 aa13.99□□□□□ -0.17
VARS2-205ENST00000469358 SNAP23O00161 211 aa13.99□□□□□ -0.17
VARS2-205ENST00000469358 SERPINC1P01008 464 aa13.99□□□□□ -0.17
VARS2-205ENST00000469358 SYKP43405 635 aa13.99□□□□□ -0.17
VARS2-205ENST00000469358 GSDMDP57764 484 aa13.99□□□□□ -0.17
VARS2-205ENST00000469358 ATL3Q6DD88 541 aa13.99□□□□□ -0.17
VARS2-205ENST00000469358 FOXP4Q8IVH2 680 aaPredicted RBP13.99□□□□□ -0.17
VARS2-205ENST00000469358 CMTR1Q8N1G2 835 aaKnown RBP13.99□□□□□ -0.17
VARS2-205ENST00000469358 NCOA7Q8NI08 942 aa13.99□□□□□ -0.17
VARS2-205ENST00000469358 IDH1O75874 414 aaKnown RBP13.99□□□□□ -0.17
VARS2-205ENST00000469358 ZNF827Q17R98 1081 aa13.99□□□□□ -0.17
VARS2-205ENST00000469358 CFAP100Q494V2 611 aa13.99□□□□□ -0.17
VARS2-205ENST00000469358 UTP14AQ9BVJ6 771 aaKnown RBP13.99□□□□□ -0.17
VARS2-205ENST00000469358 ARFGEF2Q9Y6D5 1785 aa13.98□□□□□ -0.17
VARS2-205ENST00000469358 YEATS4O95619 227 aa13.98□□□□□ -0.17
VARS2-205ENST00000469358 GRIN1Q05586 938 aa13.98□□□□□ -0.17
VARS2-205ENST00000469358 PDE4BQ07343 736 aa13.98□□□□□ -0.17
VARS2-205ENST00000469358 GNL2Q13823 731 aaKnown RBP13.98□□□□□ -0.17
VARS2-205ENST00000469358 FANCLQ9NW38 375 aa13.98□□□□□ -0.17
VARS2-205ENST00000469358 PHRF1Q9P1Y6 1649 aaKnown RBP13.98□□□□□ -0.17
VARS2-205ENST00000469358 ATP2B1P20020 1258 aa13.98□□□□□ -0.17
VARS2-205ENST00000469358 MCAMP43121 646 aa13.98□□□□□ -0.17
VARS2-205ENST00000469358 UBASH3AP57075 661 aa13.98□□□□□ -0.17
VARS2-205ENST00000469358 EVCP57679 992 aa13.98□□□□□ -0.17
VARS2-205ENST00000469358 LONRF3Q496Y0 759 aa13.98□□□□□ -0.17
VARS2-205ENST00000469358 KRT40Q6A162 431 aa13.98□□□□□ -0.17
VARS2-205ENST00000469358 SLC9C2Q5TAH2 1124 aa13.97□□□□□ -0.17
VARS2-205ENST00000469358 KRT222Q8N1A0 295 aa13.97□□□□□ -0.17
VARS2-205ENST00000469358 HELBQ8NG08 1087 aaPredicted RBP13.97□□□□□ -0.17
VARS2-205ENST00000469358 GPR108Q9NPR9 543 aa13.97□□□□□ -0.17
VARS2-205ENST00000469358 ABCC6O95255 1503 aa13.97□□□□□ -0.17
VARS2-205ENST00000469358 SCN11AQ9UI33 1791 aa13.97□□□□□ -0.17
VARS2-205ENST00000469358 ARHGAP29Q52LW3 1261 aa13.97□□□□□ -0.17
VARS2-205ENST00000469358 GRAMD1CQ8IYS0 662 aa13.97□□□□□ -0.17
VARS2-205ENST00000469358 MYH15Q9Y2K3 1946 aa13.97□□□□□ -0.17
VARS2-205ENST00000469358 KIF20AO95235 890 aa13.97□□□□□ -0.17
VARS2-205ENST00000469358 CMA1P23946 247 aa13.97□□□□□ -0.17
VARS2-205ENST00000469358 METAP2P50579 478 aaKnown RBP eCLIP13.97□□□□□ -0.17
VARS2-205ENST00000469358 SLC39A14Q15043 492 aa13.97□□□□□ -0.17
VARS2-205ENST00000469358 TRMT44Q8IYL2 757 aaKnown RBP13.97□□□□□ -0.17
VARS2-205ENST00000469358 APPBP2Q92624 585 aa13.97□□□□□ -0.17
VARS2-205ENST00000469358 C1orf167Q5SNV9 1468 aa13.97□□□□□ -0.17
VARS2-205ENST00000469358 ZBTB22O15209 634 aa13.96□□□□□ -0.17
VARS2-205ENST00000469358 BMP6P22004 513 aa13.96□□□□□ -0.17
VARS2-205ENST00000469358 CLCN6P51797 869 aa13.96□□□□□ -0.17
VARS2-205ENST00000469358 CCDC191Q8NCU4 936 aa13.96□□□□□ -0.17
VARS2-205ENST00000469358 ZKSCAN3Q9BRR0 538 aa13.96□□□□□ -0.17
VARS2-205ENST00000469358 URI1O94763 535 aaPredicted RBP13.96□□□□□ -0.17
VARS2-205ENST00000469358 SEC31AO94979 1220 aaKnown RBP13.96□□□□□ -0.17
VARS2-205ENST00000469358 TERF2Q15554 542 aa13.96□□□□□ -0.17
VARS2-205ENST00000469358 METTL16Q86W50 562 aaKnown RBP13.96□□□□□ -0.17
VARS2-205ENST00000469358 PIH1D3Q9NQM4 214 aaKnown RBP13.96□□□□□ -0.17
VARS2-205ENST00000469358 IMPACTQ9P2X3 320 aa13.96□□□□□ -0.17
VARS2-205ENST00000469358 DHX16O60231 1041 aaKnown RBP13.96□□□□□ -0.18
VARS2-205ENST00000469358 RANBP6O60518 1105 aaKnown RBP13.96□□□□□ -0.18
VARS2-205ENST00000469358 GUCY1A2P33402 732 aa13.96□□□□□ -0.18
VARS2-205ENST00000469358 METTL24Q5JXM2 366 aa13.96□□□□□ -0.18
VARS2-205ENST00000469358 PDILTQ8N807 584 aa13.96□□□□□ -0.18
VARS2-205ENST00000469358 CCDC150Q8NCX0 1101 aa13.96□□□□□ -0.18
VARS2-205ENST00000469358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.96□□□□□ -0.189e-7■■□□□ 12.3
VARS2-205ENST00000469358 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.96□□□□□ -0.18
VARS2-205ENST00000469358 ADAMTS7Q9UKP4 1686 aa13.96□□□□□ -0.18
VARS2-205ENST00000469358 NWD2Q9ULI1 1742 aa13.96□□□□□ -0.18
VARS2-205ENST00000469358 NFXL1Q6ZNB6 911 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms