RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SNAP23O00161 211 aa11.06□□□□□ -0.64
SMC1A-205ENST00000469129 ZNF213O14771 459 aa11.06□□□□□ -0.64
SMC1A-205ENST00000469129 BBOX1O75936 387 aa11.06□□□□□ -0.64
SMC1A-205ENST00000469129 MBD4O95243 580 aa11.06□□□□□ -0.64
SMC1A-205ENST00000469129 PDCP20941 246 aa11.06□□□□□ -0.64
SMC1A-205ENST00000469129 ATP2B4P23634 1241 aa11.06□□□□□ -0.64
SMC1A-205ENST00000469129 TRDNQ13061 729 aa11.06□□□□□ -0.64
SMC1A-205ENST00000469129 TOB2Q14106 344 aaPredicted RBP11.06□□□□□ -0.64
SMC1A-205ENST00000469129 SLFNL1Q499Z3 407 aa11.06□□□□□ -0.64
SMC1A-205ENST00000469129 SPTY2D1Q68D10 685 aaPredicted RBP11.06□□□□□ -0.64
SMC1A-205ENST00000469129 CCDC83Q8IWF9 413 aa11.06□□□□□ -0.64
SMC1A-205ENST00000469129 NCOA7Q8NI08 942 aa11.06□□□□□ -0.64
SMC1A-205ENST00000469129 FAM84BQ96KN1 310 aaPredicted RBP11.06□□□□□ -0.64
SMC1A-205ENST00000469129 PDGFDQ9GZP0 370 aaPredicted RBP11.06□□□□□ -0.64
SMC1A-205ENST00000469129 RAI14Q9P0K7 980 aa11.06□□□□□ -0.64
SMC1A-205ENST00000469129 ANKIB1Q9P2G1 1089 aa11.06□□□□□ -0.64
SMC1A-205ENST00000469129 PARP3Q9Y6F1 533 aa11.06□□□□□ -0.64
SMC1A-205ENST00000469129 KLRG2A4D1S0 409 aaPredicted RBP11.05□□□□□ -0.64
SMC1A-205ENST00000469129 BAG4O95429 457 aaKnown RBP11.05□□□□□ -0.64
SMC1A-205ENST00000469129 LARGE1O95461 756 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 BRD1O95696 1058 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 FGAP02671 866 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 APPP05067 770 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 MCM5P33992 734 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 DDX60LQ5H9U9 1706 aaKnown RBP11.05□□□□□ -0.64
SMC1A-205ENST00000469129 Q6ZUG5 572 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 STOX1Q6ZVD7 989 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 COL23A1Q86Y22 540 aaPredicted RBP11.05□□□□□ -0.64
SMC1A-205ENST00000469129 FBXL16Q8N461 479 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 STRBPQ96SI9 672 aaKnown RBP11.05□□□□□ -0.64
SMC1A-205ENST00000469129 BRIP1Q9BX63 1249 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 AGXT2Q9BYV1 514 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 NAPBQ9H115 298 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 SPON1Q9HCB6 807 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 ABCF2Q9UG63 623 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 KIF3AQ9Y496 699 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 ATP6V1DQ9Y5K8 247 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 TAF6LQ9Y6J9 622 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 SALL1Q9NSC2 1324 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 PSME4Q14997 1843 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 KIF13BQ9NQT8 1826 aa11.05□□□□□ -0.64
SMC1A-205ENST00000469129 MYH1P12882 1939 aa11.04□□□□□ -0.64
SMC1A-205ENST00000469129 PATL2C9JE40 543 aaKnown RBP11.04□□□□□ -0.64
SMC1A-205ENST00000469129 FOXP2O15409 715 aa11.04□□□□□ -0.64
SMC1A-205ENST00000469129 ZBTB7AO95365 584 aa11.04□□□□□ -0.64
SMC1A-205ENST00000469129 CYP7A1P22680 504 aa11.04□□□□□ -0.64
SMC1A-205ENST00000469129 PDE6BP35913 854 aa11.04□□□□□ -0.64
SMC1A-205ENST00000469129 ME3Q16798 604 aa11.04□□□□□ -0.64
SMC1A-205ENST00000469129 NAA16Q6N069 864 aaPredicted RBP11.04□□□□□ -0.64
SMC1A-205ENST00000469129 WDR66Q8TBY9 1149 aa11.04□□□□□ -0.64
SMC1A-205ENST00000469129 GTF3C6Q969F1 213 aa11.04□□□□□ -0.64
SMC1A-205ENST00000469129 CNNM2Q9H8M5 875 aa11.04□□□□□ -0.64
SMC1A-205ENST00000469129 PODXL2Q9NZ53 605 aa11.04□□□□□ -0.64
SMC1A-205ENST00000469129 GGA1Q9UJY5 639 aa11.04□□□□□ -0.64
SMC1A-205ENST00000469129 TPCN1Q9ULQ1 816 aa11.04□□□□□ -0.64
SMC1A-205ENST00000469129 IQSEC3Q9UPP2 1182 aaPredicted RBP11.04□□□□□ -0.64
SMC1A-205ENST00000469129 IRS2Q9Y4H2 1338 aa11.04□□□□□ -0.64
SMC1A-205ENST00000469129 MAGEB6P1A0A0J9YX57 407 aa11.03□□□□□ -0.64
SMC1A-205ENST00000469129 PPEF1O14829 653 aaPredicted RBP11.03□□□□□ -0.64
SMC1A-205ENST00000469129 UFL1O94874 794 aa11.03□□□□□ -0.64
SMC1A-205ENST00000469129 NPR1P16066 1061 aa11.03□□□□□ -0.64
SMC1A-205ENST00000469129 GJB2P29033 226 aa11.03□□□□□ -0.64
SMC1A-205ENST00000469129 TDO2P48775 406 aa11.03□□□□□ -0.64
SMC1A-205ENST00000469129 EXOSC10Q01780 885 aaKnown RBP11.03□□□□□ -0.64
SMC1A-205ENST00000469129 TTLL5Q6EMB2 1281 aa11.03□□□□□ -0.64
SMC1A-205ENST00000469129 MB21D2Q8IYB1 491 aaPredicted RBP11.03□□□□□ -0.64
SMC1A-205ENST00000469129 BRF1Q92994 677 aa11.03□□□□□ -0.64
SMC1A-205ENST00000469129 LLPHQ9BRT6 129 aaKnown RBP11.03□□□□□ -0.64
SMC1A-205ENST00000469129 TMX4Q9H1E5 349 aaPredicted RBP11.03□□□□□ -0.64
SMC1A-205ENST00000469129 ARMT1Q9H993 441 aa11.03□□□□□ -0.64
SMC1A-205ENST00000469129 ZNF646O15015 1829 aaPredicted RBP11.02□□□□□ -0.64
SMC1A-205ENST00000469129 STX6O43752 255 aa11.02□□□□□ -0.65
SMC1A-205ENST00000469129 PFKFB2O60825 505 aa11.02□□□□□ -0.65
SMC1A-205ENST00000469129 ALDH1B1P30837 517 aa11.02□□□□□ -0.65
SMC1A-205ENST00000469129 HAND2P61296 217 aa11.02□□□□□ -0.65
SMC1A-205ENST00000469129 GSTO1P78417 241 aa11.02□□□□□ -0.65
SMC1A-205ENST00000469129 HMGN5P82970 282 aaKnown RBP11.02□□□□□ -0.65
SMC1A-205ENST00000469129 GIMAP6Q6P9H5 292 aa11.02□□□□□ -0.65
SMC1A-205ENST00000469129 CERS3Q8IU89 383 aa11.02□□□□□ -0.65
SMC1A-205ENST00000469129 IFNL3Q8IZI9 196 aa11.02□□□□□ -0.65
SMC1A-205ENST00000469129 LCORLQ8N3X6 602 aa11.02□□□□□ -0.65
SMC1A-205ENST00000469129 ZNF274Q96GC6 653 aaPredicted RBP11.02□□□□□ -0.65
SMC1A-205ENST00000469129 TCEANC2Q96MN5 208 aa11.02□□□□□ -0.65
SMC1A-205ENST00000469129 KRT23Q9C075 422 aa11.02□□□□□ -0.65
SMC1A-205ENST00000469129 MTFR1LQ9H019 292 aa11.02□□□□□ -0.65
SMC1A-205ENST00000469129 RNF41Q9H4P4 317 aaPredicted RBP11.02□□□□□ -0.65
SMC1A-205ENST00000469129 PPP1R1BQ9UD71 204 aaPredicted RBP11.02□□□□□ -0.65
SMC1A-205ENST00000469129 SLC4A4Q9Y6R1 1079 aa11.02□□□□□ -0.65
SMC1A-205ENST00000469129 PRC1O43663 620 aa11.01□□□□□ -0.65
SMC1A-205ENST00000469129 DHX16O60231 1041 aaKnown RBP11.01□□□□□ -0.65
SMC1A-205ENST00000469129 TRAK2O60296 914 aa11.01□□□□□ -0.65
SMC1A-205ENST00000469129 MMP10P09238 476 aa11.01□□□□□ -0.65
SMC1A-205ENST00000469129 ZSCAN22P10073 491 aaPredicted RBP11.01□□□□□ -0.65
SMC1A-205ENST00000469129 KLRK1P26718 216 aa11.01□□□□□ -0.65
SMC1A-205ENST00000469129 GPSM2P81274 684 aa11.01□□□□□ -0.65
SMC1A-205ENST00000469129 CHAF1AQ13111 956 aaPredicted RBP11.01□□□□□ -0.65
SMC1A-205ENST00000469129 PKP1Q13835 747 aa11.01□□□□□ -0.65
SMC1A-205ENST00000469129 GSE1Q14687 1217 aa11.01□□□□□ -0.65
SMC1A-205ENST00000469129 CSPP1Q1MSJ5 1256 aa11.01□□□□□ -0.65
SMC1A-205ENST00000469129 DZIP1Q86YF9 867 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms