RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 ZMYM6O95789 1325 aa17.91■□□□□ 0.46
CRAMP1-206ENST00000468839 CDK5RAP2Q96SN8 1893 aa17.9■□□□□ 0.46
CRAMP1-206ENST00000468839 BAZ2AQ9UIF9 1905 aaKnown RBP17.9■□□□□ 0.46
CRAMP1-206ENST00000468839 PATL2C9JE40 543 aaKnown RBP17.9■□□□□ 0.46
CRAMP1-206ENST00000468839 FGAP02671 866 aa17.9■□□□□ 0.46
CRAMP1-206ENST00000468839 CASTP20810 708 aaKnown RBP17.9■□□□□ 0.46
CRAMP1-206ENST00000468839 GRIPAP1Q4V328 841 aa17.9■□□□□ 0.46
CRAMP1-206ENST00000468839 NAA16Q6N069 864 aaPredicted RBP17.9■□□□□ 0.46
CRAMP1-206ENST00000468839 NSUN4Q96CB9 384 aaKnown RBP17.9■□□□□ 0.46
CRAMP1-206ENST00000468839 EYA3Q99504 573 aa17.9■□□□□ 0.46
CRAMP1-206ENST00000468839 RTFDC1Q9BY42 306 aaPredicted RBP17.9■□□□□ 0.46
CRAMP1-206ENST00000468839 ZC3H12CQ9C0D7 883 aaKnown RBP17.9■□□□□ 0.46
CRAMP1-206ENST00000468839 PSME4Q14997 1843 aa17.9■□□□□ 0.46
CRAMP1-206ENST00000468839 FAM205AQ6ZU69 1335 aa17.9■□□□□ 0.46
CRAMP1-206ENST00000468839 SNED1Q8TER0 1413 aa17.89■□□□□ 0.46
CRAMP1-206ENST00000468839 ZNF646O15015 1829 aaPredicted RBP17.89■□□□□ 0.45
CRAMP1-206ENST00000468839 MBD4O95243 580 aa17.89■□□□□ 0.45
CRAMP1-206ENST00000468839 OLFM4Q6UX06 510 aa17.89■□□□□ 0.45
CRAMP1-206ENST00000468839 ZNF384Q8TF68 577 aa17.89■□□□□ 0.45
CRAMP1-206ENST00000468839 TAF6LQ9Y6J9 622 aa17.89■□□□□ 0.45
CRAMP1-206ENST00000468839 TGFB2P61812 414 aa17.88■□□□□ 0.45
CRAMP1-206ENST00000468839 MECOMQ03112 1051 aa17.88■□□□□ 0.45
CRAMP1-206ENST00000468839 BLOC1S2Q6QNY1 142 aa17.88■□□□□ 0.45
CRAMP1-206ENST00000468839 NEK1Q96PY6 1258 aa17.88■□□□□ 0.45
CRAMP1-206ENST00000468839 MAGEB6P1A0A0J9YX57 407 aa17.87■□□□□ 0.45
CRAMP1-206ENST00000468839 ZBTB7AO95365 584 aa17.87■□□□□ 0.45
CRAMP1-206ENST00000468839 LDHBP07195 334 aaKnown RBP17.87■□□□□ 0.45
CRAMP1-206ENST00000468839 KCNA3P22001 575 aa17.87■□□□□ 0.45
CRAMP1-206ENST00000468839 RPS6KB1P23443 525 aa17.87■□□□□ 0.45
CRAMP1-206ENST00000468839 POLD1P28340 1107 aa17.87■□□□□ 0.45
CRAMP1-206ENST00000468839 PRDX5P30044 214 aa17.87■□□□□ 0.45
CRAMP1-206ENST00000468839 IMMTQ16891 758 aaKnown RBP17.87■□□□□ 0.45
CRAMP1-206ENST00000468839 TTLL6Q8N841 843 aa17.87■□□□□ 0.45
CRAMP1-206ENST00000468839 TBC1D22AQ8WUA7 517 aa17.87■□□□□ 0.45
CRAMP1-206ENST00000468839 RIOK1Q9BRS2 568 aaKnown RBP17.87■□□□□ 0.45
CRAMP1-206ENST00000468839 ARMT1Q9H993 441 aa17.87■□□□□ 0.45
CRAMP1-206ENST00000468839 PDRG1Q9NUG6 133 aa17.87■□□□□ 0.45
CRAMP1-206ENST00000468839 GSG1L2A8MUP6 293 aa17.86■□□□□ 0.45
CRAMP1-206ENST00000468839 E7EWF7 191 aa17.86■□□□□ 0.45
CRAMP1-206ENST00000468839 RIMBP2O15034 1052 aa17.86■□□□□ 0.45
CRAMP1-206ENST00000468839 HMGB1P09429 215 aaKnown RBP17.86■□□□□ 0.45
CRAMP1-206ENST00000468839 CUL4AQ13619 759 aa17.86■□□□□ 0.45
CRAMP1-206ENST00000468839 R3HDM1Q15032 1099 aaKnown RBP17.86■□□□□ 0.45
CRAMP1-206ENST00000468839 TTLL5Q6EMB2 1281 aa17.86■□□□□ 0.45
CRAMP1-206ENST00000468839 STOX1Q6ZVD7 989 aa17.86■□□□□ 0.45
CRAMP1-206ENST00000468839 ADGRA1Q86SQ6 560 aa17.86■□□□□ 0.45
CRAMP1-206ENST00000468839 IFNL3Q8IZI9 196 aa17.86■□□□□ 0.45
CRAMP1-206ENST00000468839 LCORLQ8N3X6 602 aa17.86■□□□□ 0.45
CRAMP1-206ENST00000468839 TMX3Q96JJ7 454 aa17.86■□□□□ 0.45
CRAMP1-206ENST00000468839 ATF5Q9Y2D1 282 aaPredicted RBP17.86■□□□□ 0.45
CRAMP1-206ENST00000468839 SCN9AQ15858 1988 aa17.86■□□□□ 0.45
CRAMP1-206ENST00000468839 LDHCP07864 332 aa17.85■□□□□ 0.45
CRAMP1-206ENST00000468839 CPA1P15085 419 aa17.85■□□□□ 0.45
CRAMP1-206ENST00000468839 DPEP1P16444 411 aa17.85■□□□□ 0.45
CRAMP1-206ENST00000468839 DDIT3P35638 169 aa17.85■□□□□ 0.45
CRAMP1-206ENST00000468839 AK2P54819 239 aa17.85■□□□□ 0.45
CRAMP1-206ENST00000468839 GSTO1P78417 241 aa17.85■□□□□ 0.45
CRAMP1-206ENST00000468839 FOCADQ5VW36 1801 aa17.85■□□□□ 0.45
CRAMP1-206ENST00000468839 TIAM2Q8IVF5 1701 aa17.85■□□□□ 0.45
CRAMP1-206ENST00000468839 SUPT20HQ8NEM7 779 aa17.85■□□□□ 0.45
CRAMP1-206ENST00000468839 SGIP1Q9BQI5 828 aa17.85■□□□□ 0.45
CRAMP1-206ENST00000468839 SUGT1Q9Y2Z0 365 aa17.85■□□□□ 0.45
CRAMP1-206ENST00000468839 FER1L6Q2WGJ9 1857 aa17.84■□□□□ 0.45
CRAMP1-206ENST00000468839 LAMB1P07942 1786 aa17.84■□□□□ 0.45
CRAMP1-206ENST00000468839 A0A0G2JLW4 131 aa17.84■□□□□ 0.45
CRAMP1-206ENST00000468839 ZNF213O14771 459 aa17.84■□□□□ 0.45
CRAMP1-206ENST00000468839 APPP05067 770 aa17.84■□□□□ 0.45
CRAMP1-206ENST00000468839 ANKRD1Q15327 319 aa17.84■□□□□ 0.45
CRAMP1-206ENST00000468839 PODNQ7Z5L7 613 aa17.84■□□□□ 0.45
CRAMP1-206ENST00000468839 DZIP1Q86YF9 867 aaKnown RBP17.84■□□□□ 0.45
CRAMP1-206ENST00000468839 MIGA1Q8NAN2 632 aa17.84■□□□□ 0.45
CRAMP1-206ENST00000468839 ZSCAN31Q96LW9 406 aaPredicted RBP17.84■□□□□ 0.45
CRAMP1-206ENST00000468839 NACAP1Q9BZK3 213 aa17.84■□□□□ 0.45
CRAMP1-206ENST00000468839 EPB41L4AQ9HCS5 686 aaPredicted RBP17.84■□□□□ 0.45
CRAMP1-206ENST00000468839 LIMCH1Q9UPQ0 1083 aa17.84■□□□□ 0.45
CRAMP1-206ENST00000468839 SLC4A4Q9Y6R1 1079 aa17.84■□□□□ 0.45
CRAMP1-206ENST00000468839 PPP4CP60510 307 aa17.83■□□□□ 0.44
CRAMP1-206ENST00000468839 GIMAP6Q6P9H5 292 aa17.83■□□□□ 0.44
CRAMP1-206ENST00000468839 SPRYD3Q8NCJ5 442 aa17.83■□□□□ 0.44
CRAMP1-206ENST00000468839 FAM163AQ96GL9 167 aaPredicted RBP17.83■□□□□ 0.44
CRAMP1-206ENST00000468839 NAPBQ9H115 298 aa17.83■□□□□ 0.44
CRAMP1-206ENST00000468839 CIZ1Q9ULV3 898 aaPredicted RBP17.83■□□□□ 0.44
CRAMP1-206ENST00000468839 JAG2Q9Y219 1238 aa17.83■□□□□ 0.44
CRAMP1-206ENST00000468839 MYH1P12882 1939 aa17.82■□□□□ 0.44
CRAMP1-206ENST00000468839 ECM29Q5VYK3 1845 aa17.82■□□□□ 0.44
CRAMP1-206ENST00000468839 PRKAB2O43741 272 aa17.82■□□□□ 0.44
CRAMP1-206ENST00000468839 HSP90AA1P07900 732 aaKnown RBP17.82■□□□□ 0.44
CRAMP1-206ENST00000468839 DYNLL1P63167 89 aaKnown RBP17.82■□□□□ 0.44
CRAMP1-206ENST00000468839 EXOSC10Q01780 885 aaKnown RBP17.82■□□□□ 0.44
CRAMP1-206ENST00000468839 GRIK5Q16478 980 aa17.82■□□□□ 0.44
CRAMP1-206ENST00000468839 DHX32Q7L7V1 743 aaKnown RBP17.82■□□□□ 0.44
CRAMP1-206ENST00000468839 RTKN2Q8IZC4 609 aa17.82■□□□□ 0.44
CRAMP1-206ENST00000468839 INTS4Q96HW7 963 aaKnown RBP17.82■□□□□ 0.44
CRAMP1-206ENST00000468839 SLKQ9H2G2 1235 aaPredicted RBP17.82■□□□□ 0.44
CRAMP1-206ENST00000468839 CWC22Q9HCG8 908 aaKnown RBP17.82■□□□□ 0.44
CRAMP1-206ENST00000468839 CHMP5Q9NZZ3 219 aa17.82■□□□□ 0.44
CRAMP1-206ENST00000468839 G3V3G9 751 aa17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 C21orf2O43822 256 aa17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 FKBP1AP62942 108 aaKnown RBP17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 GTF2IP78347 998 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms